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1. Preface 
2. Introduction to Human Biology and the Scientific Method 
1. Introduction 
2. Structural Organization of the Human Body 
3. Functions of Human Life 
4. Classification of Organisms 
5. The Process of Science 
3. Chemistry and Life 
1. Introduction 
2. The Building Blocks of Molecules 
3. The Chemical and Physical Properties of Water 
4. Biological Macromolecules 
4. Cells 
1. Introduction 
2. Prokaryotic and Eukaryotic Cells 
3. A More Detailed Look at Eukaryotic Cells 
4. A More Detailed Look At The Cell Membrane 
5. Passive Transport Mechanisms 
6. Active Transport Mechanisms 
5. DNA and Gene Expression 
1. Introduction to the Central Dogma of Molecular Biology 
2. DNA and RNA 
3. The Basics of DNA Replication 
4. ‘Transcription 
5. Translation 
6. Digestive System 
1. Homeostasis 
2. The Digestive System 
7. Energy Considerations 
1. Introduction to Metabolism 
2. Energy and Metabolism 


3. Glycolysis 
4. The Transition Reaction, Citric Acid/Kreb's Cycle and 
Electron Transport Chain/Oxidative Phosphorylation 
o. Fermentation 
8. Blood 
1. Introduction to the Cardiovascular System - Blood 
2. An Overview of Blood 
3. Erythrocytes 
4. Blood Typing and Transfusions 
9. Heart 

1. Introduction to the Cardiovascular System - Heart 
2. Heart Anatomy 
3. Cardiac Muscle and Electrical Activity 
4. Cardiac Cycle 

10. Blood Vessels 
1. Introduction to the Cardiovascular System - Blood Vessels 

and Circulation 

2. Structure and Function of Blood Vessels 

11. Respiratory System 
1. Introduction to the Respiratory System 
3. Gas Pressure, Volume, and Breathing 
4. Gas Exchange 
5. Transport of Gases 

12. Hormones 
1. Endocrine System 

13. Urinary System 
1. Introduction to the Urinary System 
2. Urinary System Anatomy and Function 
3. Hormonal Control of Urine Concentration 

14. Mitosis and Meiosis 
1. Introduction to Cell Division 


2. Chromosomes and the Genome 
3. The Cell Cycle 
4. Meiosis and Genetic Variation 
15. Reproductive Systems 
1. Introduction to the Reproductive Systems 
3. Female Reproductive Anatomy and Physiology; Gestation 
and Labor 
16. Skeletal System 
1. Introduction to Bone Tissue 
2. Functions of the Skeletal System 
3. Bone Structure 
4. Bone Formation and Development 
17. Muscles and Movement 
1. Muscle Contraction and Locomotion 
18. Nervous System 
1. Introduction to the Nervous System 
2. Neurons and Glial Cells 
3. How Neurons Communicate 
4. The Central and Peripheral Nervous Systems 
19. Special Senses 
1. Introduction to the Special Senses 
2. Taste and Smell 
3. Hearing and Vestibular Sensation 
4. Vision 
20. Immune System 
1. Introduction to the Immune System 
2. Innate Immunity 
3. Adaptive Immunity 


Preface 

This book is derived from three OpenStax resources: Biology, Concepts of 
Biology, and Anatomy and Physiology. It has been extensively edited so 
that the chapter order and content is appropriate for a non-majors human 
biology course. 


Welcome to Human Biology, a textbook created utilizing OpenStax 
resources. This textbook has been created with several goals in mind: 
accessibility, customization, and student engagement—all while 
encouraging students toward high levels of academic scholarship. Students 
will find that this textbook offers a strong introduction to human biology in 
an accessible format. 


About OpenStax College 


OpenStax College is a non-profit organization committed to improving 
student access to quality learning materials. Their free textbooks are 
developed and peer-reviewed by educators to ensure they are readable, 
accurate, and meet the scope and sequence requirements of today’s college 
courses. Unlike traditional textbooks, OpenStax College resources live 
online and are owned by the community of educators using them. Through 
partnerships with companies and foundations committed to reducing costs 
for students, OpenStax College is working to improve access to higher 
education for all. OpenStax College is an initiative of Rice University and is 
made possible through the generous support of several philanthropic 
foundations. 


About OpenStax College's Resources 


OpenStax College resources provide quality academic instruction. Three 
key features set our materials apart from others: they can be customized by 
instructors for each class, they are a “living” resource that grows online 
through contributions from science educators, and they are available free or 
for minimal cost. The materials for this book were compiled and 
customized by Willy Cushwa, with valuable editorial assistance provided 
by Jamey Marsh. Please send any content suggestions and/or corrections to 
Willy Cushwa at wcushwa@clark.edu. 


To broaden access and encourage community curation, our text books are 
“open source” licensed under a Creative Commons Attribution (CC-BY) 
license. The scientific community is invited to submit examples, emerging 
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info@openstaxcollege.org, and check in on edition status, alternate 
versions, errata, and news on the StaxDash at http://openstaxcollege.org. 


Cost 


Our textbooks are available for free online, and in low-cost print and e-book 
editions. 


About Our Team 


Concepts of Biology would not be possible if not for the tremendous 
contributions of the authors and community reviewing team 


Senior Contributors 


Samantha Fowler Clayton State University 
Rebecca Roush Sandhills Community College 
James Wise Hampton University 


Faculty Contributors and Reviewers 


Mark Belk 

Lisa Boggs 
Sherryl Broverman 
David Byres 
Aaron Cassill 
Karen Champ 

Sue Chaplin 

Diane Day 

Jean DeSaix 
David Hunnicutt 
Barbara Kuehner 
Brenda Leady 
Bernie Marcus 
Flora Mhlanga 
Madeline Mignone 
Elizabeth Nash 
Mark Newton 
Diana Oliveras 


Ann Paterson 


Brigham Young University 

Southwestern Oklahoma State University 
Duke University 

Florida State College at Jacksonville 

The University of Texas at San Antonio 
College of Central Florida 

University of St. Thomas 

Clayton State University 

University of North Carolina at Chapel Hill 
St. Norbert College 

Hawaii Community College 

University of Toledo 

Genesee Community College 

Lipscomb University 

Dominican College 

Long Beach City College 

San Jose City College 

University of Colorado Boulder 


Williams Baptist College 


Joel Piperberg 
Nick Reeves 

Ann Reisenauer 
Lynn Rumfelt 
Michael Rutledge 
Edward Saiff 
Brian Shmaefsky 
Gary Shultz 
Donald Slish 
Anh-Hue Tu 


Elena Zoubina 


Millersville University 

Mt. San Jacinto College 

San Jose State University 

Gordon College 

Middle Tennessee State University 
Ramapo College of New Jersey 
Kingwood College 

Marshall University 

SUNY Plattsburgh 

Georgia Southwestern State University 


Bridgewater State University 


Introduction 
class="introduction" 
Blood Pressure 


A basic 
understandin 
g of medical 

procedures 
allows you to 
better 
understand 
information 
collected by 
medical 
professionals. 
(credit: Bryan 
Mason/flickr) 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


e Describe the structure of the body, from simplest to most complex, in 
terms of the six levels of organization 

e List characteristics of human life 

e Define homeostasis and explain its importance to normal human 
functioning 


Though you may approach a course in human biology strictly as a 
requirement for obtaining your degree, the knowledge you gain in this 
course will serve you well in many aspects of your life. An understanding 
of your body and how it works can benefit your own health. Familiarity 
with the human body can help you make healthful choices and prompt you 
to take appropriate action when signs of illness arise. Your knowledge in 
this field will help you understand news about nutrition, medications, 
medical devices, and procedures. This knowledge will also help you 
understand genetic and infectious diseases. At some point, everyone will 
have a problem with some aspect of his or her body and your knowledge 
can help you to be a better parent, spouse, partner, friend, or caregiver. 


This chapter begins with an overview of anatomy and physiology. It then 
covers the characteristics of life and how the body works to maintain stable 
conditions. 


Structural Organization of the Human Body 
By the end of this section, you will be able to: 


¢ Describe the structure of the human body in terms of six levels of 
organization 

e List the eleven organ systems of the human body and identify at least 
one organ and one major function of each 


Before you begin to study the different structures and functions of the 
human body, it is helpful to consider its basic architecture; that is, how its 
smallest parts are assembled into larger structures. It is convenient to 
consider the structures of the body in terms of fundamental levels of 
organization that increase in complexity: subatomic particles (e.g. protons, 
neutrons, and electrons), atoms, molecules, macromolecules (e.g. 
carbohydrates, lipids, proteins, and nucleic acids) organelles, cells, tissues, 
organs, organ systems, and organisms ((link]). 

Levels of Structural Organization of the Human Body 


Oxygen atom 


Chemical level 
Atoms bond to form 
molecules with three- 
dimensional structures. 


Jd Water molecule 


Smooth muscle cell 


Cellular level 
A variety of molecules 
combine to form the 
fluid and organelles 

of a body cell. 


Organelle 


Cell fluid 


Organelle 


Smooth muscle tissue 


Tissue level 
A community of similar 
cells form a body tissue. 


Bladder 


Organ level 
Two or more different tissues 
combine to form an organ. 


Skeletal 
muscle 


Urinary tract system 
Kidney 
Organ system level 
Ureter Two or more organs work 
closely together to perform 


he functi \f . 
Bladder the functions of a body system. 


A, Ureth ra 


1" 


Organismal level 
Many organ system work harmoniously 

together to perform the functions of an J 
independent organism. fo 


The organization of the body often is discussed in terms of six 
distinct levels of increasing complexity, from the smallest 
chemical building blocks to a unique human organism. Note: 
The macromolecule level (which is located between molecules 
and organelles) isn't shown. 


The Levels of Organization 


To study the chemical level of organization, scientists consider the simplest 
building blocks of matter: subatomic particles, atoms and molecules. All 
matter in the universe is composed of one or more unique pure substances 
called elements, familiar examples of which are hydrogen, oxygen, carbon, 
nitrogen, calcium, and iron. The smallest unit of any of these pure 
substances (elements) is an atom. Atoms are made up of subatomic particles 
such as the proton, electron and neutron. Two or more atoms combine to 
form a molecule, such as the water molecules, proteins, and sugars found in 
living things. Molecules are the chemical building blocks of all body 
structures. 


A cell is the smallest independently functioning unit of a living organism. 
Even bacteria, which are extremely small, independently-living organisms, 
have a cellular structure. Each bacterium is a single cell. All living 
structures of human anatomy contain cells, and almost all functions of 
human physiology are performed in cells or are initiated by cells. 


A human cell typically consists of flexible membranes that enclose 
cytoplasm, a water-based cellular fluid together with a variety of tiny 
functioning units called organelles. In humans, as in all organisms, cells 
perform all functions of life. A tissue is a group of many similar cells 
(though sometimes composed of a few related types) that work together to 
perform a specific function. An organ is an anatomically distinct structure 
of the body composed of two or more tissue types. Each organ performs one 
or more specific physiological functions. An organ system is a group of 
organs that work together to perform major functions or meet physiological 
needs of the body. 


Figures 2 and 3 below show the eleven distinct organ systems in the human 
body. Assigning organs to organ systems can be imprecise since organs that 
“belong” to one system can also have functions integral to another system. 
In fact, most organs contribute to more than one system. In this course, we 
will discuss some, but not all, of these organ systems. 

Organ Systems of the Human Body 


Integumentary System Skeletal System 


¢ Encloses internal * Supports the body 
body structures ¢ Enables movement 
* Site of many (with muscular 
sensory receptors system) 
Muscular System Nervous System 
¢ Enables movement * Detects and 
(with skeletal system) processes sensory 
¢ Helps maintain body information 
temperature * Activates bodily 
responses 


Skeletal 
muscles 


Endocrine System Cardiovascular System 


Pituitary 

gland * Secretes hormones * Delivers oxygen 
. ¢ Regulates bodily and nutrients to 

Thyroid processes tissues 

gland * Equalizes 


temperature in 
the body 


Pancreas 


Adrenal 
glands 


Blood 
vessels 


Ovaries 


Organs that work together are grouped into organ 
systems. 


Organ Systems of the Human Body (continued) 


Lymphatic System 


¢ Returns fluid to 
blood 

¢ Defends against 
pathogens 


Digestive System 


¢ Processes food for 
use by the body 

« Removes wastes 
from undigested 
food 


Stomach 


Liver 


Gall 
bladder 


Large 
intestine 


Small 
intestine 


Male Reproductive 
System 


¢ Produces sex 
hormones and 
gametes 

* Delivers gametes 
to female 


Epididymis 


Respiratory System 


* Removes carbon 
dioxide from the 
body 

* Delivers oxygen 
to blood 


Nasal passage 


Trachea 


Lungs 


Urinary System 


* Controls water 
balance in the 
body 

« Removes wastes 
from blood and 


Kidneys excretes them 


Urinary 
bladder 


Female Reproductive 
System 
* Produces sex 
Mammary hormones 
glands and gametes 
* Supports embryo/ 
fetus until birth 
* Produces milk for 
: infant 
Ovaries 


Organs that work together are grouped into organ 
systems. 


The organism level is the highest level of organization. An organism is a 
living being that has a cellular structure and that can independently perform 
all physiologic functions necessary for life. In multicellular organisms, 
including humans, all cells, tissues, organs, and organ systems of the body 
work together to maintain the life and health of the organism. 


Chapter Review 


Life processes of the human body are maintained at several levels of 
structural organization. These include the chemical, cellular, tissue, organ, 
organ system, and the organism level. Higher levels of organization are 
built from lower levels. Therefore, subatomic particles combine to produce 
atoms, atoms combine to produce molecules, molecules combine to produce 
macromolecules, macromolecules contribute to the formation of organelles 
which combine to form cells, cells combine to form tissues, tissues combine 
to form organs, organs combine to form organ systems, and organ systems 
combine to form organisms. 


Review Questions 


Exercise: 


Problem: 


The smallest independently functioning unit of an organism is a(n) 


a. cell 

b. molecule 
c. organ 

d. tissue 


Solution: 


A 
Exercise: 


Problem: 


A collection of similar tissues that performs a specific function is an 


a. organ 
b. organelle 
c. organism 
d. organ system 


Solution: 


A 
Exercise: 


Problem: 


The body system responsible for processing food, absorbing nutrients, 
and expelling wastes is the 


a. cardiovascular system 
b. endocrine system 


c. muscular system 
d. digestive system 


Solution: 


D 


CRITICAL THINKING QUESTIONS 


Exercise: 


Problem:Name the six levels of organization of the human body. 
Solution: 


Chemical, cellular, tissue, organ, organ system, organism. 
Exercise: 

Problem: 

The female ovaries and the male testes are a part of which body 


system? Can these organs be members of more than one organ system? 
Why or why not? 


Solution: 


The female ovaries and the male testes are parts of the reproductive 
system. But they also secrete hormones, as does the endocrine system, 
therefore ovaries and testes function within both the endocrine and 
reproductive systems. 


Glossary 


cell 
smallest independently functioning unit of all organisms; in animals, a 
cell contains cytoplasm, composed of fluid and organelles 


organ 
functionally distinct structure composed of two or more types of 
tissues 


organ system 
group of organs that work together to carry out a particular function 


organism 


living being that has a cellular structure and that can independently 
perform all physiologic functions necessary for life 


tissue 
group of similar or closely related cells that act together to perform a 
specific function 


Functions of Human Life 
By the end of this section, you will be able to: 


e Explain the importance of organization to the function of the human 
organism 

e Distinguish between metabolism, anabolism, and catabolism 

e Provide at least two examples of human responsiveness and human 
movement 

e Compare and contrast growth, differentiation, and reproduction 


The different organ systems each have different functions and therefore 
unique roles to perform in physiology. These many functions can be 
summarized in terms of a few that we might consider definitive of human 
life: organization, metabolism, responsiveness, homeostasis, adaptation, 
movement, development, and reproduction. 


Organization 


A human body consists of trillions of cells organized in a way that 
maintains distinct internal compartments. These compartments keep body 
cells separated from external environmental threats and keep the cells moist 
and nourished. They also separate internal body fluids from the countless 
microorganisms that grow on body surfaces, including the lining of certain 
tracts, or passageways. The intestinal tract, for example, is home to even 
more bacteria cells than the total of all human cells in the body, yet these 
bacteria are outside the body and cannot be allowed to circulate freely 
inside the body. 


Cells, for example, have a cell membrane (also referred to as the plasma 
membrane) that keeps the intracellular environment—the fluids and 
organelles—separate from the extracellular environment. Blood vessels 
keep blood inside a closed circulatory system, and nerves and muscles are 
wrapped in connective tissue sheaths that separate them from surrounding 
structures. In the chest and abdomen, a variety of internal membranes keep 
major organs such as the lungs, heart, and kidneys separate from others. 


The body’s largest organ system is the integumentary system, which 
includes the skin and its associated structures, such as hair and nails. The 
surface tissue of skin is a barrier that protects internal structures and fluids 
from potentially harmful microorganisms and other toxins. 


Metabolism 


The first law of thermodynamics holds that energy can neither be created 
nor destroyed—it can only change form. Your basic function as an 
organism is to consume (ingest) molecules in the foods you eat, convert 
some of it into fuel for movement, sustain your body functions, and build 
and maintain your body structures. There are two types of reactions that 
accomplish this: anabolism and catabolism. 


e Anabolism is the process whereby smaller, simpler molecules are 
combined into larger, more complex substances. Your body can 
assemble, by utilizing energy, the complex chemicals it needs by 
combining small molecules derived from the foods you eat 

¢ Catabolism is the process by which larger more complex substances 
are broken down into smaller simpler molecules. Catabolism releases 
energy. The complex molecules found in foods are broken down so the 
body can use their parts to assemble the structures and substances 
needed for life. 


Taken together, these two processes are called metabolism. Metabolism is 
the sum of all anabolic and catabolic reactions that take place in the body 
({link]). Both anabolism and catabolism occur simultaneously and 
continuously to keep you alive. 

Metabolism 


Catabolism | 9 Anabolism 


Releases O Requires 
energy im o energy @ 


Food 


Anabolic reactions are building 
reactions, and they consume 
energy. Catabolic reactions 
break materials down and 
release energy. Metabolism 
includes both anabolic and 
catabolic reactions. 


Every cell in your body makes use of a chemical compound, adenosine 
triphosphate (ATP), to store and release energy. Think of ATP as the 
energy "currency" of the cell. If energy is needed for something to happen 
in the cell, then ATP is used to "pay the energy bill". The cell stores energy 
in the synthesis (anabolism) of ATP, then moves the ATP molecules to the 
location where energy is needed to fuel cellular activities. Then the ATP is 
broken down (catabolism) and a controlled amount of energy is released, 
which is used by the cell to perform a particular job. 


Responsiveness 


Responsiveness is the ability of an organism to adjust to changes in its 
internal and external environments. An example of responsiveness to 
external stimuli could include moving toward sources of food and water and 


away from perceived dangers. Changes in an organism’s internal 
environment, such as increased body temperature, can cause the responses 
of sweating and the dilation of blood vessels in the skin in order to decrease 
body temperature, as shown by the runners in [link]. 


Homeostasis 


To function properly, cells require appropriate conditions such as proper 
temperature, pH, and concentrations of diverse chemicals. These conditions 
may, however, change from one moment to the next. Organisms are able to 
maintain internal conditions within a narrow range almost constantly, 
despite environmental changes, through a process called homeostasis or 
“steady state”—the ability of an organism to maintain constant internal 
conditions. For example, many organisms regulate their body temperature 
in a process known as thermoregulation. Organisms that live in cold 
climates, such as the polar bear, have body structures that help them 
withstand low temperatures and conserve body heat. In hot climates, 
organisms have methods (such as perspiration in humans or panting in 
dogs) that help them to shed excess body heat. As we discuss organ 
systems, the concept of homeostasis will be critically important to 
remember. 


Adaptation 


All living organisms exhibit a “fit” to their environment. Biologists refer to 
this fit as adaptation and it is a consequence of evolution by natural 
selection (i.e. survival of the fittest), which operates in every lineage of 
reproducing organisms. Examples of adaptations are diverse and unique, 
from heat-resistant bacteria that live in boiling hot springs to the tongue 
length of a nectar-feeding moth that matches the size of the flower from 
which it feeds. All adaptations enhance the reproductive potential of the 
individual exhibiting them, including their ability to survive to reproduce. 
Adaptations are not constant. As an environment changes, natural selection 
causes the characteristics of the individuals in a population to track those 
changes. 


Movement 


Human movement includes not only actions at the joints of the body, but 
also the motion of individual organs and even individual cells. As you read 
these words, red and white blood cells are moving throughout your body, 
muscle cells are contracting and relaxing to maintain your posture and to 
focus your vision, and glands are secreting chemicals to regulate body 
functions. Your body is coordinating the action of entire muscle groups to 
enable you to move air into and out of your lungs, to push blood throughout 
your body, and to propel the food you have eaten through your digestive 
tract. Consciously, of course, you contract your skeletal muscles to move 
the bones of your skeleton to get from one place to another (as the runners 
are doing in [link]), and to carry out all of the activities of your daily life. 
Marathon Runners 


Runners demonstrate two characteristics of living 
humans—responsiveness and movement. Anatomic 
structures and physiological processes allow runners 

to coordinate the action of muscle groups and sweat in 
response to rising internal body temperature. (credit: 
Phil Roeder/flickr) 


Development, growth and reproduction 


Development is all of the changes the body goes through in life. 
Development includes the processes of differentiation, growth, and renewal. 


Growth is the increase in body size. Humans, like all multicellular 
organisms, grow by increasing the number of existing cells, increasing the 
amount of non-cellular material around cells (such as mineral deposits in 
bone), and, within very narrow limits, increasing the size of existing cells. 


Reproduction is the formation of a new organism from parent organisms. 
In humans, reproduction is carried out by the male and female reproductive 
systems. Because death will come to all complex organisms, without 
reproduction, the line of organisms would end. 


Chapter Review 


Most processes that occur in the human body are not consciously 
controlled. They occur continuously to build, maintain, and sustain life. 
These processes include: organization, in terms of the maintenance of 
essential body boundaries; metabolism, including energy transfer via 
anabolic and catabolic reactions; responsiveness; homeostasis; adaptation; 
movement; and growth, differentiation, reproduction, and renewal. 


Interactive Link Questions 


Exercise: 


Problem: 


View this animation to learn more about metabolic processes. What 
kind of catabolism occurs in the heart? 


Solution: 


Fatty acid catabolism. 


Review Questions 


Exercise: 


Problem: Metabolism can be defined as the 


a. adjustment by an organism to external or internal changes 

b. process whereby all unspecialized cells become specialized to 
perform distinct functions 

c. process whereby new cells are formed to replace worn-out cells 

d. sum of all chemical reactions in an organism 


Solution: 


D 
Exercise: 


Problem: 


Adenosine triphosphate (ATP) is an important molecule because it 


a. is the result of catabolism 

b. releases energy in uncontrolled bursts 
c. provides energy for use by body cells 
d. All of the above 


Solution: 


C 
Exercise: 


Problem: 


Cancer cells can be characterized as “generic” cells that perform no 
specialized body function. Thus cancer cells lack 


a. differentiation 

b. reproduction 

c. responsiveness 

d. both reproduction and responsiveness 


Solution: 


A 


CRITICAL THINKING QUESTIONS 


Exercise: 
Problem: 
Explain why the smell of smoke when you are sitting at a campfire 


does not trigger alarm, but the smell of smoke in your residence hall 
does. 


Solution: 


When you are sitting at a campfire, your sense of smell adapts to the 
smell of smoke. Only if that smell were to suddenly and dramatically 
intensify would you be likely to notice and respond. In contrast, the 
smell of even a trace of smoke would be new and highly unusual in 
your residence hall, and would be perceived as danger. 


Exercise: 


Problem: 

Identify three different ways that growth can occur in the human body. 
Solution: 

Growth can occur by increasing the number of existing cells, 


increasing the size of existing cells, or increasing the amount of non- 
cellular material around cells. 


Glossary 


anabolism 
assembly of more complex molecules from simpler molecules 


catabolism 
breaking down of more complex molecules into simpler molecules 


development 
changes an organism goes through during its life 


differentiation 
process by which unspecialized cells become specialized in structure 
and function 


growth 
process of increasing in size 


metabolism 
sum of all of the body’s chemical reactions 


renewal 
process by which worn-out cells are replaced 


reproduction 
process by which new organisms are generated 


responsiveness 
ability of an organisms or a system to adjust to changes in conditions 


Classification of Organisms 
By the end of this section, you will be able to: 


¢ Describe the levels of organization among living things 
e State the domain, kingdom, genus, and species for humans 


The Diversity of Life 


In the 18th century, a scientist named Carl Linnaeus first proposed 


organisms are collected together into groups at the highest level. The 
current taxonomic system now has eight levels in its hierarchy, from lowest 
to highest: species, genus, family, order, class, phylum, kingdom, domain. 


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DOMAIN 


Lion Mouse Whale Fish Earthworm Paramecium 
Eukarya Dog Wolf Coyote Fox S Sn h 


eal Human Bat jake Mot Tree 


KINGDOM 


Lion Mouse Whale Fish Earthworm 
Animalia Dog Wet Coes Fa Sn Moth 


Seal Human Bat ake 


PHYLUM 


Fox Lion Mouse Whale Fish 
Chordata 


Dog. “Wolf, “Coyote Seal Human Bat Snake 


CLASS Lion Mouse Whale 
Mammalia Dog a Fox Seal Human Bat 


ORDER 
Carnivora 


Lion 
Dog Wolf Coyote Fox Seal 
FAMILY 

Canidae Dog Wolf Coyote Fox 
GENUS 
Canis Dog Wolf Coyote 
SPECIES 


Canis lupus Dog a 


This diagram shows the levels of taxonomic hierarchy for a 
dog, from the broadest category—domain—to the most 
specific—species. Notice that humans and dogs diverge at 
the level of order. Humans are classified in the following 


levels: order-Primates; family-Hominidae; genus: Homo; 
species- Homo sapiens; scientific/binomial name: Homo 
Sapiens. 


In addition to the hierarchical taxonomic system, Linnaeus was the first to 
name organisms using two unique names, now called the binomial naming 
system. Before Linnaeus, the use of common names to refer to organisms 
caused confusion because there were regional differences in these common 
names. Binomial names (also called scientific names) consist of the genus 
name (which is capitalized) and the species name (all lower-case). Both 
names are set in italics when they are printed. Every species is given a 
unique binomial which is recognized the world over, so that a scientist in 
any location can know which organism is being referred to. For example, 
the North American blue jay is known uniquely as Cyanocitta cristata. Our 
Own species is Homo sapiens. 


Note: 


Glossary 


atom 


a basic unit of matter that cannot be broken down by normal chemical 
reactions 


biology 
the study of living organisms and their interactions with one another 
and their environments 


biosphere 
a collection of all ecosystems on Earth 


cell 


the smallest fundamental unit of structure and function in living things 


community 
a set of populations inhabiting a particular area 


ecosystem 
all living things in a particular area together with the abiotic, nonliving 
parts of that environment 


eukaryote 
an organism with cells that have nuclei and membrane-bound 
organelles 


evolution 
the process of gradual change in a population that can also lead to new 
species arising from older species 


homeostasis 
the ability of an organism to maintain constant internal conditions 


macromolecule 
a large molecule typically formed by the joining of smaller molecules 


molecule 
a chemical structure consisting of at least two atoms held together by a 
chemical bond 


organ 
a structure formed of tissues operating together to perform a common 
function 


organ system 
the higher level of organization that consists of functionally related 
organs 


organelle 
a membrane-bound compartment or sac within a cell 


organism 


an individual living entity 


phylogenetic tree 
a diagram showing the evolutionary relationships among biological 
species based on similarities and differences in genetic or physical 
traits or both 


population 
all individuals within a species living within a specific area 


prokaryote 
a unicellular organism that lacks a nucleus or any other membrane- 
bound organelle 


tissue 
a group of similar cells carrying out the same function 


The Process of Science 
By the end of this section, you will be able to: 


e Describe the steps of the process of scientific inquiry and apply them 
to specific examples. 

e Distinguish between independent variables of interest, controlled 
variables, and dependent variables. 

e Describe controlled experiments and explain why they are desirable. 

e Explain the basis of a double-blind experiment and how it can help 
avoid bias. 


Like geology, physics, and chemistry, biology is a science that gathers 
knowledge about the natural world. Specifically, biology is the study of life. 
The discoveries of biology are made by a community of researchers who 
work individually and together using agreed-on methods. In this sense, 
biology, like all sciences is a social enterprise like politics or the arts. The 
methods of science include careful observation, record keeping, logical and 
mathematical reasoning, experimentation, and submitting conclusions to the 
scrutiny of others. Science also requires considerable imagination and 
creativity; a well-designed experiment is commonly described as elegant, or 
beautiful. Like politics, science has considerable practical implications and 
some science is dedicated to practical applications, such as the prevention 
of disease (see [link]). Other science proceeds largely motivated by 
curiosity. Whatever its goal, there is no doubt that science, including 
biology, has transformed human existence and will continue to do so. 


Biologists may choose to study Escherichia 
coli (E. coli), a bacterium that is a normal 
resident of our digestive tracts but which is 
also sometimes responsible for disease 
outbreaks. In this micrograph, the bacterium 
is visualized using a scanning electron 
microscope and digital colorization. (credit: 
Eric Erbe; digital colorization by 
Christopher Pooley, USDA-ARS) 


The Nature of Science 


Biology is a science, but what exactly is science? What does the study of 
biology share with other scientific disciplines? Science (from the Latin 
scientia, meaning "knowledge") can be defined as knowledge about the 
natural world. 


Science is a very specific way of learning, or knowing, about the world. 
The history of the past 500 years demonstrates that science is a very 
powerful way of knowing about the world; it is largely responsible for the 
technological revolutions that have taken place during this time. There are 


however, areas of knowledge and human experience that the methods of 
science cannot be applied to. These include such things as answering purely 
moral questions, aesthetic questions, or what can be generally categorized 
as spiritual questions. Science has cannot investigate these areas because 
they are outside the realm of material phenomena, the phenomena of matter 
and energy, and cannot be observed and measured. 


The scientific method is a method of research with defined steps that 
include experiments and careful observation. The steps of the scientific 
method will be examined in detail later, but one of the most important 
aspects of this method is the testing of hypotheses. A hypothesis is a 
suggested explanation for an event, which can be tested. Hypotheses, or 
tentative explanations, are generally produced within the context of a 
scientific theory. A scientific theory is a generally accepted, thoroughly 
tested and confirmed explanation for a set of observations or phenomena. 
Scientific theory is the foundation of scientific knowledge. In addition, in 
many scientific disciplines (less so in biology) there are scientific laws, 
often expressed in mathematical formulas, which describe how elements of 
nature will behave under certain specific conditions. There is not an 
evolution of hypotheses through theories to laws as if they represented 
some increase in certainty about the world. Hypotheses are the day-to-day 
material that scientists work with and they are developed within the context 
of theories. Laws are concise descriptions of parts of the world that are 
amenable to formulaic or mathematical description. 


Scientific Inquiry 


One thing is common to all forms of science: an ultimate goal “to know.” 
Curiosity and inquiry are the driving forces for the development of science. 
Scientists seek to understand the world and the way it operates. There are 
two main pathways of scientific study: descriptive science and hypothesis- 
based science. Descriptive (or discovery) science aims to observe, explore, 
and discover, while hypothesis-based science begins with a specific 
question or problem and a potential answer or solution that can be tested. 
The boundary between these two forms of study is often blurred, because 
most scientific endeavors combine both approaches. Observations lead to 


questions, questions lead to forming a hypothesis as a possible answer to 
those questions, and then the hypothesis is tested. Thus, descriptive science 
and hypothesis-based science are in continuous dialogue. 


Hypothesis Testing 


Biologists study the living world by posing questions about it and seeking 
science-based responses. This approach is common to other sciences as well 
and is often referred to as the scientific method. The scientific method was 
used even in ancient times, but it was first documented by England’s Sir 
Francis Bacon (1561-1626) ({link]). The scientific method is not 
exclusively used by biologists but can be applied to almost anything as a 
logical problem-solving method. 


Sir Francis Bacon 
is credited with 
being the first to 
document the 
scientific method. 


The scientific process typically starts with an observation (often a problem 
to be solved) that leads to a question. Let’s think about a simple problem 
that starts with an observation and apply the scientific method to solve the 
problem. One Monday morning, a student arrives at class and quickly 
discovers that the classroom is too warm. That is an observation that also 
describes a problem: the classroom is too warm. The student then asks a 
question: “Why is the classroom so warm?” 


Recall that a hypothesis is a suggested explanation that can be tested. To 
solve a problem, several hypotheses may be proposed. For example, one 
hypothesis might be, “The classroom is warm because no one turned on the 
air conditioning.” But there could be other responses to the question, and 
therefore other hypotheses may be proposed. A second hypothesis might be, 
“The classroom is warm because there is a power failure, and so the air 
conditioning doesn’t work.” 


Once a hypothesis has been selected, a prediction may be made. A 
prediction is similar to a hypothesis but it typically has the format “If... 
then ....” For example, the prediction for the first hypothesis might be, “If 
the student turns on the air conditioning, then the classroom will no longer 
be too warm. Notice that the portion of the statement after the word "then" 
indicates what will be observed if the hypothesis is correct. 


A hypothesis must be testable to ensure that it is valid. For example, a 
hypothesis that depends on what a bear thinks is not testable, because it can 
never be known what a bear thinks. It should also be falsifiable, meaning 
that it can be shown to be incorrect by experimental results. An example of 
an unfalsifiable hypothesis is “Botticelli’s Birth of Venus is beautiful.” 
There is no experiment that might show this statement to be false. To test a 
hypothesis, a researcher will conduct one or more experiments designed to 
eliminate one or more of the hypotheses. This is important. A hypothesis 
can be shown to be incorrect, or eliminated, but it can never be proven. 
Science does not deal in proofs like mathematics. If an experiment fails to 
show a hypothesis is incorrect, then we find support for that explanation, 
but this is not to say that down the road a better explanation will not be 


found, or a more carefully designed experiment will be found to falsify the 
hypothesis. 


Each experiment will have one or more variables and one or more controls. 
A variable is any part of the experiment that can vary or change during the 
experiment. There are three types of variables we will discuss: Independent 
variable(s) of interest, independent variables not of interest (i.e. controlled 
variables), and dependent variables. Typically, basic experiments will only 
have one independent variable of interest (i.e. the factor that is being 
changed in a deliberate manner to determine if it has an impact on the 
dependent variable). The dependent variable is the one being measured. For 
example, if an experiment is designed to test the effects of three different 
brands of plant fertilizer on plant growth, the independent variable of 
interest is the brand of fertilizer and the dependent variable is plant growth. 
It is important to realize that independent variables other than the brand of 
fertilizer could affect plant growth: soil moisture content, amount of 
sunlight, temperature, etc. In order to prevent these variables from 
impacting the results, they are "controlled", meaning they are not allowed to 
change during the experiment. In other words, plants treated with all three 
brands of fertilizer should have the same amounts of water and sunlight to 
prevent these variables from interacting with the independent variable of 
interest. A control group is a part of the experiment that does not change 
and provides a baseline of comparison to determine the effect of the 
independent variable of interest on the dependent variable. Look for the 
variables and controls in the example that follows. An experiment is 
conducted to test the hypothesis that phosphate limits the growth of algae in 
freshwater ponds. A series of artificial ponds are filled with water and half 
of them are treated by adding phosphate each week, while the other half are 
treated by adding a salt that is known not to be used by algae. The 
independent variable of interest here is the phosphate (or lack of 
phosphate), the experimental or treatment cases are the ponds with added 
phosphate and the control ponds are those with something inert added, such 
as the salt. Just adding something is also a control against the possibility 
that adding extra matter to the pond has an effect. If the treated ponds show 
lesser growth of algae, then we have found support for our hypothesis. If 
they do not, then we reject our hypothesis. Be aware that rejecting one 
hypothesis does not determine whether or not the other hypotheses can be 


accepted; it simply eliminates one hypothesis that is not valid ([link]). 
Using the scientific method, the hypotheses that are inconsistent with 
experimental data are rejected. In human drug trials, it is common for the 
control group to be given a placebo (i.e. "sugar pill") so that individuals 
both groups (experimental and control) are taking a pill. Otherwise, the act 
of taking a pill would be a variable that wasn't controlled. It is also common 
for neither the subjects nor the researchers directly working with them to 
know which group is receiving the placebo. This feature of experiments, 
called a double-blind design, is included to prevent any bias from 
influencing the results. 


Note: 
Art Connection 


Make an observation 
Ask a question 


Form a hypothesis that 
answers the question 


Make a prediction based 
on the hypothesis 


Do an experiment 


to test the prediction 


Analyze the results 


Hypothesis is 
SUPPORTED 


Report results 


Hypothesis is 
NOT SUPPORTED 


The scientific method is a series 
of defined steps that include 
experiments and careful 
observation. If a hypothesis is 
not supported by data, a new 
hypothesis can be proposed. 


In practice, the scientific method is not as rigid and structured as it might at 
first appear. Sometimes an experiment leads to conclusions that favor a 
change in approach; often, an experiment brings entirely new scientific 
questions to the puzzle. Many times, science does not operate in a linear 
fashion; instead, scientists continually draw inferences and make 
generalizations, finding patterns as their research proceeds. Scientific 
reasoning is more complex than the scientific method alone suggests. 


Reporting Scientific Work 


Whether scientific research is basic science or applied science, scientists 
must share their findings for other researchers to expand and build upon 
their discoveries. Communication and collaboration within and between sub 
disciplines of science are key to the advancement of knowledge in science. 
For this reason, an important aspect of a scientist’s work is disseminating 
results and communicating with peers. Scientists can share results by 
presenting them at a scientific meeting or conference, but this approach can 
reach only the limited few who are present. Instead, most scientists present 
their results in peer-reviewed articles that are published in scientific 
journals. Peer-reviewed articles are scientific papers that are reviewed, 
usually anonymously by a scientist’s colleagues, or peers. These colleagues 
are qualified individuals, often experts in the same research area, who judge 
whether or not the scientist’s work is suitable for publication. The process 
of peer review helps to ensure that the research described in a scientific 
paper or grant proposal is original, significant, logical, and thorough. Grant 
proposals, which are requests for research funding, are also subject to peer 


review. Scientists publish their work so other scientists can reproduce their 
experiments under similar or different conditions to expand on the findings. 
The experimental results must be consistent with the findings of other 
scientists. 


There are many journals and the popular press that do not use a peer-review 
system. A large number of online open-access journals, journals with 
articles available without cost, are now available many of which use 
rigorous peer-review systems, but some of which do not. Results of any 
studies published in these forums without peer review are not reliable and 
should not form the basis for other scientific work. In one exception, 
journals may allow a researcher to cite a personal communication from 
another researcher about unpublished results with the cited author’s 
permission. 


Section Summary 


A hypothesis is a tentative explanation for an observation. A scientific 
theory is a well-tested and consistently verified explanation for a set of 
observations or phenomena. A scientific law is a description, often in the 
form of a mathematical formula, of the behavior of an aspect of nature 
under certain circumstances. The common thread throughout scientific 
research is the use of the scientific method. Scientists present their results in 
peer-reviewed scientific papers published in scientific journals. 


Art Connections 


Exercise: 


Problem: 


[link] In the example below, the scientific method is used to solve an 
everyday problem. Which part in the example below is the hypothesis? 
Which is the prediction? Based on the results of the experiment, is the 
hypothesis supported? If it is not supported, propose some alternative 
hypotheses. 


1. My toaster doesn’t toast my bread. 

2. Why doesn’t my toaster work? 

3. There is something wrong with the electrical outlet. 

4. If something is wrong with the outlet, my coffeemaker also won’t 
work when plugged into it. 

5. I plug my coffeemaker into the outlet. 

6. My coffeemaker works. 


Solution: 


[link] The hypothesis is #3 (there is something wrong with the 
electrical outlet), and the prediction is #4 (if something is wrong with 
the outlet, then the coffeemaker also won’t work when plugged into 
the outlet). The original hypothesis is not supported, as the coffee 
maker works when plugged into the outlet. Alternative hypotheses 
may include (1) the toaster might be broken or (2) the toaster wasn’t 
turned on. 


Multiple Choice 


Exercise: 


Problem: 


A suggested and testable explanation for an event is called a 


a. hypothesis 
b. variable 

c. theory 

d. control 


Solution: 


A 


Exercise: 


Problem: 


Which of the following statements correct describes a double-blind 
experiment? 


a. Both the test subjects and the researchers in direct contact with 
them know who is in the experimental group and who is in the 
control group. 

b. The test subjects but not the researchers in direct contact with 
them know who is in the experimental group and who is in the 
control group. 

c. The researchers in direct contact with the test subjects, but not the 
test subjects, know who is in the experimental group and who is 
in the control group. 

d. Neither the test subjects or the researchers in direct contact with 
them know who is in the experimental group and who is in the 
control group. 


Solution: 


D 


Free Response 


Exercise: 


Problem: 


A research group is testing a new disease vaccine on mice. Which 
group (experimental or control) should receive the placebo? Explain 
the rationale for your response. 


Solution: 


The control group should receive the placebo, or injection without the 
active components of the vaccine. The response in the control group 
will provide a baseline of comparison for interpreting the results of the 
experimental group. 


Glossary 


applied science 
a form of science that solves real-world problems 


basic science 
science that seeks to expand knowledge regardless of the short-term 
application of that knowledge 


control 
a part of an experiment that does not change during the experiment 


deductive reasoning 
a form of logical thinking that uses a general statement to forecast 
specific results 


descriptive science 
a form of science that aims to observe, explore, and find things out 


falsifiable 
able to be disproven by experimental results 


hypothesis 
a suggested explanation for an event, which can be tested 


hypothesis-based science 
a form of science that begins with a specific explanation that is then 
tested 


inductive reasoning 
a form of logical thinking that uses related observations to arrive at a 
general conclusion 


life science 
a field of science, such as biology, that studies living things 


natural science 
a field of science that studies the physical world, its phenomena, and 
processes 


peer-reviewed article 
a scientific report that is reviewed by a scientist’s colleagues before 
publication 


physical science 
a field of science, such as astronomy, physics, and chemistry, that 
studies nonliving matter 


science 
knowledge that covers general truths or the operation of general laws, 
especially when acquired and tested by the scientific method 


scientific law 
a description, often in the form of a mathematical formula, for the 
behavior of some aspect of nature under certain specific conditions 


scientific method 
a method of research with defined steps that include experiments and 
careful observation 


scientific theory 
a thoroughly tested and confirmed explanation for observations or 
phenomena 


variable 
a part of an experiment that can vary or change 


Introduction 
class="introduction" 


Foods such as bread, 
fruit, and cheese are 
rich sources of 
biological 
macromolecules, 
such as starch, fiber, 
triglycerides, and 
polypeptides/proteins 
. (credit: modification 
of work by Bengt 
Nyman) 


The elements carbon, hydrogen, nitrogen, oxygen, sulfur, and phosphorus 
are the key building blocks of the chemicals found in living things. They 


form the carbohydrates, nucleic acids, proteins, and lipids (all of which will 
be defined later in this chapter) that are the fundamental molecular 
components of all organisms. In this chapter, we will discuss these 
important building blocks and learn how the unique properties of the atoms 
of different elements affect their interactions with other atoms to form the 
molecules of life. 


Food provides an organism with nutrients—the matter it needs to survive. 
Many of these critical nutrients come in the form of biological 
macromolecules, or large molecules necessary for life. These 
macromolecules are built from different combinations of smaller organic 
molecules. What specific types of biological macromolecules do living 
things require? How are these molecules formed? What functions do they 
serve? In this chapter, we will explore these questions. 


The Building Blocks of Molecules 
By the end of this section, you will be able to: 


e Describe matter and elements 

e Describe the interrelationship between protons, neutrons, and 
electrons, and the ways in which electrons can be donated or shared 
between atoms 


At its most fundamental level, life is made up of matter. Matter occupies 
space and has mass. All matter is composed of elements, substances that 
cannot be broken down or transformed chemically into other substances. 
Each element is made of atoms, each with a constant number of protons and 
unique properties. A total of 118 elements have been defined; however, 
only 92 occur naturally, and fewer than 30 are found in living cells. The 
remaining 26 elements are unstable and, therefore, do not exist for very 
long or are theoretical and have yet to be detected. 


Each element is designated by its chemical symbol (such as H, N, O, C, and 
Na), and possesses unique properties. These unique properties allow 
elements to combine and to bond with each other in specific ways. 


Atoms 


An atom is the smallest component of an element that retains all of the 
chemical properties of that element. For example, one hydrogen atom has 
all of the properties of the element hydrogen, such as it exists as a gas at 
room temperature, and it bonds with oxygen to create a water molecule. 
Hydrogen atoms cannot be broken down into anything smaller while still 
retaining the properties of hydrogen. If a hydrogen atom were broken down 
into subatomic particles (i.e. protons, neutrons, and electrons), it would no 
longer have the properties of hydrogen. 


At the most basic level, all organisms are made of a combination of 
elements. They contain atoms that combine together to form molecules. In 
multicellular organisms, such as animals, molecules can interact to form 
cells that combine to form tissues, which make up organs. These 
combinations continue until entire multicellular organisms are formed. 


All atoms contain protons, electrons, and neutrons ((link]). The only 
exception is hydrogen (H), which is made of one proton and one electron. A 
proton is a positively charged particle that resides in the nucleus (the core 
of the atom) of an atom and has a mass of 1 and a charge of +1. An 
electron is a negatively charged particle that travels in the space around the 
nucleus. In other words, it resides outside of the nucleus. It has a negligible 
mass (i.e. considered to be zero compared to protons and neutrons) and has 
a charge of —1. 


\ 


\ ' 

A) — Nucleus 
} | 
f / 


V4 


Electrons 


Atoms are made up of protons 
and neutrons located within the 
nucleus, and electrons 
surrounding the nucleus. 


Neutrons, like protons, reside in the nucleus of an atom. They have a mass 
of 1 and no charge. The positive (protons) and negative (electrons) charges 
balance each other in a neutral atom, which has a net zero charge. 


Because protons and neutrons each have a mass of 1, the mass of an atom is 
equal to the combined number of protons and neutrons of that atom. The 
number of electrons does not factor into the overall mass, because their 
mass is so small. 


As stated earlier, each element has its own unique properties. Each contains 
a different number of protons and neutrons, giving it its own atomic number 


and mass number. The atomic number of an element is equal to the 
number of protons that element contains. The mass number, or atomic 
mass, is the number of protons plus the number of neutrons of that element. 
Therefore, it is possible to determine the number of neutrons by subtracting 
the atomic number from the mass number. For example, the element 
phosphorus (P) has an atomic number of 15 and a mass number of 31. 
Therefore, an atom of phosphorus has 15 protons, 15 electrons, and 16 
neutrons (31-15 = 16). 


These numbers provide information about the elements and how they will 
react when combined. Different elements have different melting and boiling 
points, and are in different states (liquid, solid, or gas) at room temperature. 
They also combine in different ways. Some form specific types of bonds, 
whereas others do not. How they combine is based on the number of 
electrons present. Because of these characteristics, the elements are 
arranged into the periodic table of elements, a chart of the elements that 
includes the atomic number and relative atomic mass of each element. The 
periodic table also provides key information about the properties of 
elements ({link])—often indicated by color-coding. The arrangement of the 
table also shows how the electrons in each element are organized and 
provides important details about how atoms will react with each other to 
form molecules. 


Isotopes are different forms of the same element that have the same number 
of protons, but a different number of neutrons. Some elements, such as 
carbon, potassium, and uranium, have naturally occurring isotopes. Carbon- 
12, the most common isotope of carbon, contains six protons and six 
neutrons. Therefore, it has a mass number of 12 (six protons and six 
neutrons) and an atomic number of 6 (which makes it carbon). Carbon-14 
contains six protons and eight neutrons. Therefore, it has a mass number of 
14 (six protons and eight neutrons) and an atomic number of 6, meaning it 
is still the element carbon. These two alternate forms of carbon are isotopes. 
Some isotopes are unstable and will lose protons, other subatomic particles, 
or energy to form more stable elements. These are called radioactive 
isotopes or radioisotopes. 


Note: 
Art Connection 


Periodic Table of the Elements 


~afs P s e  [i] i 
ARB A ee eee eee 


; [| Other non-metals |_| Noble gases 
Number ; : 
Symbol [_] Alkali metals {| Lanthanides 
1.01 Relative [| Transition metals [_] Actinides 
Name Hydrogen Atomic Mass [D) Other metals [_] Unknown 


[_] Alkaline earth metals chemical 


properties 


|_| Halogens 


Arranged in columns and rows based on the characteristics of 
the elements, the periodic table provides key information about 
the elements and how they might interact with each other to 
form molecules. Most periodic tables provide a key or legend 
to the information they contain. 


Note: 

Evolution in Action 

Carbon Dating 

Carbon-14 ('4C) is a naturally occurring radioisotope that is created in the 
atmosphere by cosmic rays. This is a continuous process, so more C is 


always being created. As a living organism develops, the relative level of 
'4C in its body is equal to the concentration of '4C in the atmosphere. 
When an organism dies, it is no longer ingesting '4C, so the ratio will 
decline. '4C decays to !“N by a process called beta decay; it gives off 
energy in this slow process. 

After approximately 5,730 years, only one-half of the starting 
concentration of !4C will have been converted to !4N. The time it takes for 
half of the original concentration of an isotope to decay to its more stable 
form is called its half-life. Because the half-life of !4C is long, it is used to 
age formerly living objects, such as fossils. Using the ratio of the !4C 
concentration found in an object to the amount of !4C detected in the 
atmosphere, the amount of the isotope that has not yet decayed can be 
determined. Based on this amount, the age of the fossil can be calculated to 
about 50,000 years ({link]). Isotopes with longer half-lives, such as 
potassium-40, are used to calculate the ages of older fossils. Through the 
use of carbon dating, scientists can reconstruct the ecology and 
biogeography of organisms living within the past 50,000 years. 


The age of remains that contain 
carbon and are less than about 50,000 
years old, such as this pygmy 
mammoth, can be determined using 
carbon dating. (credit: Bill 
Faulkner/NPS) 


Note: 
Concept in Action 


[=] qa 
= openstax See 
tare E 
Oe at 


To learn more about atoms and isotopes, and how you can tell one isotope 
from another, visit this site and run the simulation. 


Chemical Bonds 


How elements interact with one another depends on how their electrons are 
arranged and how many openings for electrons exist at the outermost region 
where electrons are present in an atom. Electrons exist at energy levels that 
form shells around the nucleus. The closest shell can hold up to two 
electrons. The closest shell to the nucleus is always filled first, before any 
other shell can be filled. Hydrogen has one electron; therefore, it has only 
one spot occupied within the lowest shell. Helium has two electrons; 
therefore, it can completely fill the lowest shell with its two electrons. If 
you look at the periodic table, you will see that hydrogen and helium are the 
only two elements in the first row. This is because they only have electrons 
in their first shell. Hydrogen and helium are the only two elements that have 
the lowest shell and no other shells. 


The second and third energy levels can hold up to eight electrons. The eight 
electrons are arranged in four pairs and one position in each pair is filled 
with an electron before any pairs are completed. 


Looking at the periodic table again ({link]), you will notice that there are 
seven rows. These rows correspond to the number of shells that the 
elements within that row have. The elements within a particular row have 
increasing numbers of electrons as the columns proceed from left to right. 
Although each element has the same number of shells, not all of the shells 
are completely filled with electrons. If you look at the second row of the 
periodic table, you will find lithium (Li), beryllium (Be), boron (B), carbon 
(C), nitrogen (N), oxygen (O), fluorine (F), and neon (Ne). These all have 
electrons that occupy only the first and second shells. Lithium has only one 
electron in its outermost shell, beryllium has two electrons, boron has three, 
and so on, until the entire shell is filled with eight electrons, as is the case 
with neon. 


Not all elements have enough electrons to fill their outermost shells, but an 
atom is at its most stable when all of the electron positions in the outermost 
shell are filled. Because of these vacancies in the outermost shells, we see 
the formation of chemical bonds, or interactions between two or more of 
the same or different elements that result in the formation of molecules. To 
achieve greater stability, atoms will tend to completely fill their outer shells 
and will bond with other elements to accomplish this goal by sharing 
electrons, accepting electrons from another atom, or donating electrons to 
another atom. Because the outermost shells of the elements with low atomic 
numbers (up to calcium, with atomic number 20) can hold eight electrons, 
this is referred to as the octet rule. An element can donate, accept, or share 
electrons with other elements to fill its outer shell and satisfy the octet rule. 


When an atom does not contain equal numbers of protons and electrons, it 
is called an ion. Because the number of electrons does not equal the number 
of protons, each ion has a net charge. Positive ions are formed by losing 
electrons and are called cations. Negative ions are formed by gaining 
electrons and are called anions. 


For example, sodium only has one electron in its outermost shell. It takes 
less energy for sodium to donate that one electron than it does to accept 
seven more electrons to fill the outer shell. If sodium loses an electron, it 
now has 11 protons and only 10 electrons, leaving it with an overall charge 
of +1. It is now called a sodium ion. 


The chlorine atom has seven electrons in its outer shell. Again, it is more 
energy-efficient for chlorine to gain one electron than to lose seven. 
Therefore, it tends to gain an electron to create an ion with 17 protons and 
18 electrons, giving it a net negative (—1) charge. It is now called a chloride 
ion. This movement of electrons from one element to another is referred to 
as electron transfer. As [link] illustrates, a sodium atom (Na) only has one 
electron in its outermost shell, whereas a chlorine atom (Cl) has seven 
electrons in its outermost shell. A sodium atom will donate its one electron 
to empty its shell, and a chlorine atom will accept that electron to fill its 
shell, becoming chloride. Both ions now satisfy the octet rule and have 
complete outermost shells. Because the number of electrons is no longer 
equal to the number of protons, each is now an ion and has a +1 (sodium) or 
—1 (chloride) charge. 


Elements tend to fill their outermost 

Shells with electrons. To do this, they 

can either donate or accept electrons 
from other elements. 


Ionic Bonds 


We will study three types of bonds or interactions: ionic, covalent, and 
hydrogen bonds. When an element donates an electron from its outer shell, 
as in the sodium atom example above, a positive ion is formed. The element 
accepting the electron is now negatively charged. Because positive and 
negative charges attract, these ions stay together and form an ionic bond, or 
a bond between ions. The elements bond together with the electron from 
one element staying predominantly with the other element. When Na™ and 
CI ions combine to produce NaCl, an electron from a sodium atom stays 
with the other seven from the chlorine atom, and the sodium and chloride 
ions attract each other in a lattice of ions with a net zero charge. 


Covalent Bonds 


Another type of chemical bond between two or more atoms is a covalent 
bond. These bonds form when an electron is shared between two elements 
and are the strongest and most common form of chemical bond in living 
organisms. Covalent bonds form between the elements that make up the 
biological molecules in our cells. Unlike ionic bonds, covalent bonds do not 
dissociate (i.e. separate) in water. 


The hydrogen and oxygen atoms that combine to form water molecules are 
bound together by covalent bonds. The electron from the hydrogen atom 
divides its time between the outer shell of the hydrogen atom and the 
incomplete outer shell of the oxygen atom. To completely fill the outer shell 
of an oxygen atom, two electrons from two hydrogen atoms are needed, 
hence the subscript “2” in H)O. The electrons are shared between the 
atoms, dividing their time between them to “fill” the outer shell of each. 
This sharing is a lower energy state for all of the atoms involved than if 
they existed without their outer shells filled. 


There are two types of covalent bonds: polar and nonpolar. Nonpolar 
covalent bonds form between two atoms of the same element or between 
different elements that share the electrons equally. For example, an oxygen 
atom can bond with another oxygen atom to fill their outer shells. This 


association is nonpolar because the electrons will be equally distributed 
between each oxygen atom. Two covalent bonds form between the two 
oxygen atoms because oxygen requires two shared electrons to fill its 
outermost shell. Nitrogen atoms will form three covalent bonds (also called 
triple covalent) between two atoms of nitrogen because each nitrogen atom 
needs three electrons to fill its outermost shell. Another example of a 
nonpolar covalent bond is found in the methane (CHy) molecule. The 
carbon atom has four electrons in its outermost shell and needs four more to 
fill it. It gets these four from four hydrogen atoms, each atom providing 
one. These elements all share the electrons equally, creating four nonpolar 
covalent bonds ((link]). 


In a polar covalent bond, the electrons shared by the atoms spend more 
time closer to one nucleus than to the other nucleus. Because of the unequal 
distribution of electrons between the different nuclei, a slightly positive 
(5+) or slightly negative (S—) charge develops. The covalent bonds between 
hydrogen and oxygen atoms in water are polar covalent bonds. The shared 
electrons spend more time near the oxygen nucleus, giving it a small 
negative charge, than they spend near the hydrogen nuclei, giving these 
molecules a small positive charge. 


Polar covalent bond Nonpolar covalent bond Nonpolar covalent double bond 


‘ ) v OH) 
s- 
=— Single bond 
= Double bond 


The water molecule (left) depicts a polar bond with a 
slightly positive charge on the hydrogen atoms and a 
slightly negative charge on the oxygen. Examples of 


nonpolar bonds include methane (middle) and oxygen 
(right). 


Hydrogen Bonds 


Ionic and covalent bonds are strong bonds that require considerable energy 
to break. However, not all bonds between elements are ionic or covalent 
bonds. Weaker bonds can also form. These are attractions that occur 
between positive and negative charges that do not require much energy to 
break. An example of relatively weak bonds that occur frequently is 
hydrogen bonds. This bond gives rise to the unique properties of water and 
the unique structures of DNA and proteins. 


When polar covalent bonds containing a hydrogen atom form, the hydrogen 
atom in that bond has a slightly positive charge. This is because the shared 
electron is pulled more strongly toward the other element and away from 
the hydrogen nucleus. Because the hydrogen atom is slightly positive (6+), 
it will be attracted to neighboring negative partial charges (6—). When this 
happens, a weak interaction occurs between the 6+ charge of the hydrogen 
atom of one molecule and the 6— charge of the other molecule. This 
interaction is called a hydrogen bond. This type of bond is common; for 
example, the liquid nature of water is caused by the hydrogen bonds 
between water molecules ([link]). Hydrogen bonds give water the unique 
properties that sustain life. If it were not for hydrogen bonding, water would 
be a gas rather than a liquid at room temperature. 


Covalent bond 


i, ( 
Hydrogen bond 


Hydrogen bonds form between 
slightly positive (6+) and slightly 
negative (d—) charges of polar 
covalent molecules, such as water. 


Hydrogen bonds can form between different molecules and they do not 
always have to include a water molecule. Hydrogen atoms in polar bonds 
within any molecule can form bonds with other adjacent molecules. For 
example, hydrogen bonds hold together two long strands of DNA to give 
the DNA molecule its characteristic double-helix structure. Hydrogen bonds 
are also responsible for some of the three-dimensional structure of proteins. 


Section Summary 


Matter is anything that occupies space and has mass. It is made up of atoms 
of different elements. All of the 92 elements that occur naturally have 
unique qualities that allow them to combine in various ways to create 
compounds or molecules. Atoms, which consist of protons, neutrons, and 
electrons, are the smallest units of an element that retain all of the 
properties of that element. Electrons can be donated or shared between 
atoms to create bonds, including ionic, covalent, and hydrogen bonds. 


Art Connections 


Exercise: 


Problem: 


[link] How many neutrons do (K) potassium-39 and potassium-40 
have, respectively? 


Solution: 


[link] Potassium-39 has twenty neutrons. Potassium-40 has twenty one 
neutrons. 


Multiple Choice 


Exercise: 


Problem: 


Magnesium has an atomic number of 12. Which of the following 
statements is true of a neutral magnesium atom? 


a. It has 12 protons, 12 electrons, and 12 neutrons. 
b. It has 12 protons, 12 electrons, and six neutrons. 
c. It has six protons, six electrons, and no neutrons. 
d. It has six protons, six electrons, and six neutrons. 


Solution: 


A 


Exercise: 


Problem: Which type of bond represents a weak chemical bond? 


a. hydrogen bond 

b. ionic bond 

c. covalent bond 

d. polar covalent bond 


Solution: 


A 


Exercise: 


Problem: 


An isotope of sodium (Na) has a mass number of 22. How many 
neutrons does it have? 


a. 11 
b..12 
CZ2 
d. 44 


Solution: 


A 


Free Response 


Exercise: 


Problem: Why are hydrogen bonds necessary for cells? 


Solution: 


Hydrogen bonds form weak associations between different molecules. 
They provide the structure and shape necessary for proteins and DNA 
within cells so that they function properly. Hydrogen bonds also give 
water its unique properties, which are necessary for life. 


Glossary 


anion 
a negative ion formed by gaining electrons 


atomic number 
the number of protons in an atom 


cation 
a positive ion formed by losing electrons 


chemical bond 
an interaction between two or more of the same or different elements 
that results in the formation of molecules 


covalent bond 
a type of strong bond between two or more of the same or different 
elements; forms when electrons are shared between elements 


electron 
a negatively charged particle that resides outside of the nucleus in the 
electron orbital; lacks functional mass and has a charge of —1 


electron transfer 
the movement of electrons from one element to another 


element 
one of 118 unique substances that cannot be broken down into smaller 
substances and retain the characteristic of that substance; each element 
has a specified number of protons and unique properties 


hydrogen bond 
a weak bond between partially positively charged hydrogen atoms and 
partially negatively charged elements or molecules 


ion 
an atom or compound that does not contain equal numbers of protons 
and electrons, and therefore has a net charge 


ionic bond 
a chemical bond that forms between ions of opposite charges 


isotope 
one or more forms of an element that have different numbers of 
neutrons 


mass number 
the number of protons plus neutrons in an atom 


matter 
anything that has mass and occupies space 


neutron 
a particle with no charge that resides in the nucleus of an atom; has a 
mass of 1 


nonpolar covalent bond 
a type of covalent bond that forms between atoms when electrons are 
shared equally between atoms, resulting in no regions with partial 
charges as in polar covalent bonds 


nucleus 
(chemistry) the dense center of an atom made up of protons and 
(except in the case of a hydrogen atom) neutrons 


octet rule 
states that the outermost shell of an element with a low atomic number 
can hold eight electrons 


periodic table of elements 
an organizational chart of elements, indicating the atomic number and 
mass number of each element; also provides key information about the 
properties of elements 


polar covalent bond 
a type of covalent bond in which electrons are pulled toward one atom 
and away from another, resulting in slightly positive and slightly 
negative charged regions of the molecule 


proton 
a positively charged particle that resides in the nucleus of an atom; has 


a mass of 1 and a charge of +1 


radioactive isotope 


an isotope that spontaneously emits particles or energy to form a more 
stable element 


van der Waals interaction 
a weak attraction or interaction between molecules caused by slightly 
positively charged or slightly negatively charged atoms 


The Chemical and Physical Properties of Water 
By the end of this section, you will be able to: 


e Describe the properties of water that are critical to maintaining life 

e Distinguish between hydrophilic and hydrophobic molecules 

e Explain why water is a good solvent for many solutes 

e Explain the pH scale using the specified terms; indicate how much 
more (or less) acidic one substance is compared to another using the 
PH scale 


Do you ever wonder why scientists spend time looking for water on other 
planets? It is because water is essential to life; even minute traces of it on 
another planet can indicate that life could or did exist on that planet. Water 
is one of the more abundant molecules in living cells and the one most 
critical to life as we know it. Approximately 60—70 percent of your body is 
made up of water. Without it, life simply would not exist. 


Water Is Polar 


The hydrogen and oxygen atoms within water molecules form polar 
covalent bonds. The shared electrons spend more time associated with the 
oxygen atom than they do with hydrogen atoms. There is no overall charge 
to a water molecule, but there is a slight positive charge on each hydrogen 
atom and a slight negative charge on the oxygen atom. Because of these 
charges, the slightly positive hydrogen atoms repel each other. Each water 
molecule attracts other water molecules because of the positive and 
negative charges in the different parts of the molecule. Water also attracts 
other polar molecules (such as sugars), forming hydrogen bonds. When a 
substance readily forms hydrogen bonds with water, it can dissolve in water 
and is referred to as hydrophilic (“water-loving”). Hydrogen bonds are not 
readily formed with nonpolar substances like oils and fats ((link]). These 
nonpolar compounds are hydrophobic (“water-fearing”) and will not 
dissolve in water. 


As this macroscopic image of 
oil and water show, oil is a 
nonpolar compound and, 
hence, will not dissolve in 
water. Oil and water do not 
mix. (credit: Gautam Dogra) 


Water Stabilizes Temperature 


The hydrogen bonds in water allow it to absorb and release heat energy 
more slowly than many other substances. Temperature is a measure of the 
motion (kinetic energy) of molecules. As the motion increases, energy is 
higher and thus temperature is higher. Water absorbs a great deal of energy 
before its temperature rises. Increased energy disrupts the hydrogen bonds 
between water molecules. Because these bonds can be created and disrupted 
rapidly, water absorbs an increase in energy and temperature changes only 
minimally. This means that water moderates temperature changes within 
organisms and in their environments. As energy input continues, the 
balance between hydrogen-bond formation and destruction swings toward 
the destruction side. More bonds are broken than are formed. This process 
results in the release of individual water molecules at the surface of the 
liquid (such as a body of water, the leaves of a plant, or the skin of an 
organism) in a process called evaporation. Evaporation of sweat, which is 


90 percent water, allows for cooling of an organism, because breaking 
hydrogen bonds requires an input of energy and takes heat away from the 
body. 


Water Is an Excellent Solvent 


Because water is polar, with slight positive and negative charges, ionic 
compounds and polar molecules can readily dissolve in it. Water is, 
therefore, what is referred to as a solvent—a substance capable of 
dissolving another substance, referred to as the solute, in order to form a 
solution. The charged particles will form hydrogen bonds with a 
surrounding layer of water molecules. This is referred to as a sphere of 
hydration and serves to keep the particles separated or dispersed in the 
water. In the case of table salt (NaCl) mixed in water ([link]), the sodium 
and chloride ions separate, or dissociate, in the water, and spheres of 
hydration are formed around the ions. A positively charged sodium ion is 
surrounded by the partially negative charges of oxygen atoms in water 
molecules. A negatively charged chloride ion is surrounded by the partially 
positive charges of hydrogen atoms in water molecules. The polarity of the 
water molecule makes it an effective solvent and is important in its many 
roles in living systems. 


A single water molecule 
with partial charges 


3- 


When table salt (NaCl) is mixed in water, spheres 
of hydration form around the ions. 


Buffers, pH, Acids, and Bases 


The pH of a solution is a measure of its acidity or alkalinity. You have 
probably used litmus paper, paper that has been treated with a natural 
water-soluble dye so it can be used as a pH indicator, to test how much acid 
or base (alkalinity) exists in a solution. You might have even used some to 
make sure the water in an outdoor swimming pool is properly treated. In 
both cases, this pH test measures the amount of hydrogen ions that exists in 
a given solution. High concentrations of hydrogen ions yield a low pH, 
whereas low levels of hydrogen ions result in a high pH. The overall 
concentration of hydrogen ions is inversely related to its pH and can be 
measured on the pH scale ((link]). Therefore, the more hydrogen ions 
present, the lower the pH; conversely, the fewer hydrogen ions, the higher 
the pH. 


The pH scale ranges from 0 to 14. A change of one unit on the pH scale 
represents a change in the concentration of hydrogen ions by a factor of 10, 
a change in two units represents a change in the concentration of hydrogen 
ions by a factor of 100. Thus, small changes in pH represent large changes 
in the concentrations of hydrogen ions. Pure water is neutral. It is neither 
acidic nor basic, and has a pH of 7.0. Anything below 7.0 (ranging from 0.0 
to 6.9) is acidic, and anything above 7.0 (from 7.1 to 14.0) is alkaline. The 
blood in your veins is slightly alkaline (pH = 7.4). The environment in your 
stomach is highly acidic (pH = 1 to 2). Orange juice is mildly acidic (pH = 
approximately 3.5), whereas baking soda is basic (pH = 9.0). 


Bleach 

Soapy water 
Ammonia solution 
Milk of magnesia 
Baking soda 
Seawater 
Distilled water 


Urine 


5 Black coffee 
4 Tomato juice 
3 Orange juice 
2 Lemon juice 
1 Gastric acid 


0 


The pH scale measures the amount 
of hydrogen ions (H*) ina 
substance. (credit: modification of 
work by Edward Stevens) 


Acids are substances that provide hydrogen ions (H*) and lower pH, 
whereas bases provide hydroxide ions (OH _) and raise pH. The stronger the 
acid, the more readily it donates H*. For example, hydrochloric acid and 
lemon juice are very acidic and readily give up H” when added to water. 
Conversely, bases are those substances that readily donate OH. The OH 
ions combine with H™ to produce water, which raises a substance’s pH. 
Sodium hydroxide and many household cleaners are very alkaline and give 
up OH rapidly when placed in water, thereby raising the pH. 


Most cells in our bodies operate within a very narrow window of the pH 
scale, typically ranging only from 7.2 to 7.6. If the pH of the body is outside 
of this range, the respiratory system malfunctions, as do other organs in the 
body. Cells no longer function properly, and proteins will break down. 
Deviation outside of the pH range can induce coma or even cause death. 


So how is it that we can ingest or inhale acidic or basic substances and not 
die? Buffers are the key. Buffers readily absorb excess H* or OH’, keeping 
the pH of the body carefully maintained in the aforementioned narrow 
range. Carbon dioxide is part of a prominent buffer system in the human 
body; it keeps the pH within the proper range. This buffer system involves 
carbonic acid (H»CO3) and bicarbonate (HCO; ) anion. If too much H* 
enters the body, bicarbonate will combine with the H* to create carbonic 
acid and limit the decrease in pH. Likewise, if too much OH7 is introduced 
into the system, carbonic acid will rapidly dissociate into bicarbonate and 
H"* ions. The H* ions can combine with the OH™ ions, limiting the increase 
in pH. While carbonic acid is an important product in this reaction, its 
presence is fleeting because the carbonic acid is released from the body as 
carbon dioxide gas each time we breathe. Without this buffer system, the 
PH in our bodies would fluctuate too much and we would fail to survive. 


Section Summary 


Water has many properties that are critical to maintaining life. It is polar, 
allowing for the formation of hydrogen bonds, which allow ions and other 
polar molecules to dissolve in water. Therefore, water is an excellent 
solvent. The hydrogen bonds between water molecules give water the 
ability to hold heat better than many other substances. As the temperature 


rises, the hydrogen bonds between water continually break and reform, 
allowing for the overall temperature to remain stable, although increased 
energy is added to the system. All of these unique properties of water are 
important in the chemistry of living organisms. 


The pH of a solution is a measure of the concentration of hydrogen ions in 
the solution. A solution with a high number of hydrogen ions is acidic and 
has a low pH value. A solution with a high number of hydroxide ions is 
basic and has a high pH value. The pH scale ranges from 0 to 14, with a pH 
of 7 being neutral. Buffers are solutions that moderate pH changes when an 
acid or base is added to the buffer system. Buffers are important in 
biological systems because of their ability to maintain constant pH 
conditions. 


Multiple Choice 


Exercise: 


Problem: Which of the following statements is FALSE? 


a. Water is polar. 

b. Water stabilizes temperature. 

c. Water is essential for life. 

d. Water is the most abundant atom in Earth’s atmosphere. 


Solution: 


D 
Exercise: 


Problem: 


Using a pH meter, you find the pH of an unknown solution to be 8.0. 
How would you describe this solution? 


a. weakly acidic 


b. strongly acidic 
c. weakly basic 
d. strongly basic 


Solution: 


C 
Exercise: 
Problem: 
The pH of lemon juice is about 2.0, whereas tomato juice's pH is about 
4. Therefore, the concentration of hydrogen ions in the tomato juice is 
times than the lemon juice. 
a. 2; greater 
b. 2; less 
c. 100; less 
d. 100; greater 


Solution: 


c 


Free Response 


Exercise: 


Problem: Explain why water is an excellent solvent. 
Solution: 
Water molecules are polar, meaning they have separated partial 


positive and negative charges. Because of these charges, water 
molecules are able to surround charged particles created when a 


substance dissociates. The surrounding layer of water molecules 
stabilizes the ion and keeps differently charged ions from 
reassociating, so the substance stays dissolved. 


Glossary 


acid 
a substance that donates hydrogen ions and therefore lowers pH 


adhesion 
the attraction between water molecules and molecules of a different 
substance 


base 
a substance that absorbs hydrogen ions and therefore raises pH 


buffer 
a solution that resists a change in pH by absorbing or releasing 
hydrogen or hydroxide ions 


cohesion 
the intermolecular forces between water molecules caused by the polar 
nature of water; creates surface tension 


evaporation 
the release of water molecules from liquid water to form water vapor 


hydrophilic 
describes a substance that dissolves in water; water-loving 


hydrophobic 
describes a substance that does not dissolve in water; water-fearing 


litmus paper 
filter paper that has been treated with a natural water-soluble dye so it 
can be used as a pH indicator 


PH scale 
a scale ranging from 0 to 14 that measures the approximate 
concentration of hydrogen ions of a substance 


solvent 
a substance capable of dissolving another substance 


surface tension 
the cohesive force at the surface of a body of liquid that prevents the 
molecules from separating 


temperature 
a measure of molecular motion 


Biological Macromolecules 
By the end of this section, you will be able to: 


e Describe the ways in which carbon is critical to life 

e Explain the impact of slight changes in amino acids on organisms 
¢ Describe the four major types of biological molecules 

e Understand the functions of the four major types of molecules 


The large molecules necessary for life that are built from smaller organic 
molecules are called biological macromolecules. There are four major 
classes of biological macromolecules (carbohydrates, lipids, proteins, and 
nucleic acids), and each is an important component of the cell and performs 
a wide array of functions. Combined, these molecules make up the majority 
of a cell’s mass. Biological macromolecules are organic, meaning that they 
contain carbon. In addition, they may contain hydrogen, oxygen, nitrogen, 
phosphorus, sulfur, and additional minor elements. 


Carbon 


It is often said that life is “carbon-based.” This means that carbon atoms, 
bonded to other carbon atoms or other elements, form the fundamental 
components of many, if not most, of the molecules found uniquely in living 
things. Other elements play important roles in biological molecules, but 
carbon certainly qualifies as the “foundation” element for molecules in 
living things. It is the bonding properties of carbon atoms that are 
responsible for its important role. 


Carbon Bonding 


Carbon contains four electrons in its outer shell. Therefore, it can form four 
covalent bonds with other atoms or molecules. The simplest organic carbon 
molecule is methane (CH), in which four hydrogen atoms bind to a carbon 
atom ([Link]). 


Methane 


Cy 
On” moO 


V4 


Carbon can form four covalent bonds to 
create an organic molecule. The simplest 
carbon molecule is methane (CH,), depicted 
here. 


However, structures that are more complex are made using carbon. Any of 
the hydrogen atoms can be replaced with another carbon atom covalently 
bonded to the first carbon atom. In this way, long and branching chains of 
carbon compounds can be made ((link]a). The carbon atoms may bond with 
atoms of other elements, such as nitrogen, oxygen, and phosphorus 
({link]b). The molecules may also form rings, which themselves can link 
with other rings ([link]c). This diversity of molecular forms accounts for the 
diversity of functions of the biological macromolecules and is based to a 
large degree on the ability of carbon to form multiple bonds with itself and 
other atoms. 


Oo H H 
YS lt Zs 
C-C-N 
74 | \ 
HO H H 
(b) 
i 
H-C-OH 
H ¢ e H 
‘c H Bt 7 
7 N 
HO SY YH H ff OH 
ya \ 
H OH 


(c) 


These examples show three 
molecules (found in living 
organisms) that contain carbon 
atoms bonded in various ways 
to other carbon atoms and the 
atoms of other elements. (a) 
This molecule of stearic acid 
has a long chain of carbon 
atoms. (b) Glycine, a 
component of proteins, contains 
carbon, nitrogen, oxygen, and 
hydrogen atoms. (c) Glucose, a 
sugar, has a ring of five carbon 
atoms and one oxygen atom. 
The chemical formula for 
glucose is CgH)20¢ 


Carbohydrates 


Carbohydrates are macromolecules with which most consumers are 
somewhat familiar. To lose weight, some individuals adhere to “low-carb” 
diets. Athletes, in contrast, often “carb-load” before important competitions 
to ensure that they have sufficient energy to compete at a high level. 
Carbohydrates are, in fact, an essential part of our diet; grains, fruits, and 
vegetables are all natural sources of carbohydrates. Carbohydrates provide 
energy to the body, particularly through glucose, a simple sugar. 
Carbohydrates also have other important functions in humans, animals, and 
plants. 


Carbohydrates can be represented by the formula (CH»O),, where n is the 
number of carbon atoms in the molecule. In other words, the ratio of carbon 
to hydrogen to oxygen is 1:2:1 in carbohydrate molecules. Carbohydrates 
are classified into three subtypes: monosaccharides, disaccharides, and 
polysaccharides. 


Monosaccharides (mono- = “one”; sacchar- = “sweet”) are simple sugars, 
the most common of which is glucose. In monosaccharides, the number of 
carbon atoms usually ranges from three to six. Most monosaccharide names 
end with the suffix -ose. Depending on the number of carbon atoms in the 
sugar, they may be known as trioses (three carbon atoms), pentoses (five 
carbon atoms), and hexoses (six carbon atoms). 


The chemical formula for glucose is CgH; Og. In most living species, 
glucose is an important source of energy. During cellular respiration, energy 
is released from glucose, and that energy is used to help make adenosine 
triphosphate (ATP). Plants synthesize glucose using carbon dioxide and 
water by the process of photosynthesis, and the glucose, in turn, is used for 
the energy requirements of the plant. The excess synthesized glucose is 
often stored as starch that is broken down by other organisms that feed on 
plants. 


Galactose (part of lactose, or milk sugar) and fructose (found in fruit) are 
other common monosaccharides. Although glucose, galactose, and fructose 
all have the same chemical formula (CgH, Og), they differ structurally and 


chemically (and are known as isomers) because of differing arrangements 
of atoms in the carbon chain ([link)). 


Glucose Galactose Fructose 


Glucose, galactose, and fructose are 
isomeric monosaccharides, meaning that 
they have the same chemical formula but 

slightly different structures. 


Disaccharides (di- = “two”) form when two monosaccharides undergo a 
dehydration-synthesis reaction (a reaction in which the removal of a water 
molecule occurs). During this process, the hydroxyl group (-OH) of one 
monosaccharide combines with a hydrogen atom of another 
monosaccharide, releasing a molecule of water (H»O) and forming a 
covalent bond between atoms in the two sugar molecules. 


Common disaccharides include lactose, maltose, and sucrose. Lactose is a 
disaccharide consisting of the monomers glucose and galactose. It is found 
naturally in milk. Maltose, or malt sugar, is a disaccharide formed from a 
dehydration reaction between two glucose molecules. The most common 


disaccharide is sucrose, or table sugar, which is composed of the monomers 
glucose and fructose. 


A long chain of monosaccharides linked by covalent bonds is known as a 
polysaccharide (poly- = “many”). The chain may be branched or 
unbranched, and it may contain different types of monosaccharides. 
Polysaccharides may be very large molecules. Starch, glycogen, and 
cellulose are examples of polysaccharides. 


Starch is the stored form of sugars in plants and is made up of amylose and 
amylopectin (both polymers of glucose). Plants are able to synthesize 
glucose, and the excess glucose is stored as starch in different plant parts, 
including roots and seeds. The starch that is consumed by animals is broken 
down into smaller molecules, such as glucose. The cells can then absorb the 
glucose. 


Glycogen is the storage form of glucose in humans and other vertebrates, 
and is made up of monomers of glucose. Glycogen is the animal equivalent 
of starch and is a highly branched molecule usually stored in liver and 
muscle cells as a form of stored energy. Whenever glucose levels decrease, 
glycogen is broken down to release glucose. In the case of muscle cells, the 
glucose is used to produce ATP for energy-requiring processes. In the case 
of the liver, the glucose is released into the circulatory system to maintain 
blood sugar homeostasis. 


Cellulose is one of the most abundant natural biopolymers. The cell walls 
of plants are mostly made of cellulose, which provides structural support to 
the cell. Wood and paper are mostly cellulosic in nature. Cellulose is made 
up of glucose monomers that are linked by bonds between particular carbon 
atoms in the glucose molecule. 


Every other glucose monomer in cellulose is flipped over and packed 
tightly as extended long chains. This gives cellulose its rigidity and high 
tensile strength—which is so important to plant cells. Cellulose passing 
through our digestive system is called dietary fiber. While the glucose- 
glucose bonds in cellulose cannot be broken down by human digestive 
enzymes, animals such as cows, buffalos, and horses (examples of 
ruminants) are able to digest grass that is rich in cellulose and use it as a 


food source. In these animals, certain species of bacteria reside in the rumen 
(a part of their digestive system) and secrete the enzyme cellulase. The 
appendix also contains bacteria that break down cellulose, giving it an 
important role in the digestive systems of ruminants. Cellulases can break 
down cellulose into glucose monomers that can be used as an energy source 
by the animal. 


Thus, through differences in molecular structure, carbohydrates are able to 
serve the very different functions of energy storage (starch and glycogen) 
and structural support and protection (cellulose) ({link]). 


Starch Glycogen 
CH 20H CH20H CH20OH CH20H CH20H 


) Oo, O, ro) 
OH OH OH OH Hd \OH °° 
5 0 a 7 if CH,OH 
OH OH OH OH OH O 


OH ? 
CH20H CH CH 20H CH20H 
ie] ©. 0. Oo. 
OH OH OH OH 
HO O ie) ie} OH 
OH OH OH 
Cellulose Chitin 


ie ny 


oO fis X fis 
‘ “ 
ra iia 
ie Cho! eu 
ir fe) og OH 


CH,OH CH,OH 


Although their structures and functions differ, all 
polysaccharide carbohydrates are made up of 
monosaccharides and have the chemical formula 
(CH,O)n. 


Note: 

Careers in Action 

Registered Dietitian 

Obesity is a worldwide health concern, and many diseases, such as 
diabetes and heart disease, are becoming more prevalent because of 
obesity. This is one of the reasons why registered dietitians are increasingly 
sought after for advice. Registered dietitians help plan food and nutrition 
programs for individuals in various settings. They often work with patients 
in health-care facilities, designing nutrition plans to prevent and treat 
diseases. For example, dietitians may teach a patient with diabetes how to 
manage blood-sugar levels by eating the correct types and amounts of 
carbohydrates. Dietitians may also work in nursing homes, schools, and 
private practices. 

To become a registered dietitian, one needs to earn at least a bachelor’s 
degree in dietetics, nutrition, food technology, or a related field. In 
addition, registered dietitians must complete a supervised internship 
program and pass a national exam. Those who pursue careers in dietetics 
take courses in nutrition, chemistry, biochemistry, biology, microbiology, 
and human physiology. Dietitians must become experts in the chemistry 
and functions of food (proteins, carbohydrates, and fats). 


Lipids 


Lipids include a diverse group of compounds that are united by a common 
feature. Lipids are hydrophobic (“water-fearing”), or insoluble in water, 
because they are nonpolar molecules. This is because they are hydrocarbons 
that include only nonpolar carbon-carbon or carbon-hydrogen bonds. Lipids 
perform many different functions in a cell. Cells store energy for long-term 
use in the form of lipids called fats (or triglycerides). Lipids also provide 
insulation from the environment for plants and animals ([link]). For 
example, they help keep aquatic birds and mammals dry because of their 
water-repelling nature. Lipids are also the building blocks of many 
hormones and are an important constituent of the plasma membrane. Lipids 
include fats, oils, phospholipids, and steroids. 


Hydrophobic lipids in the fur of 
aquatic mammals, such as this river 
otter, protect them from the elements. 
(credit: Ken Bosma) 


A fat molecule, such as a triglyceride, consists of two main components— 
glycerol and fatty acids. Glycerol is an organic compound with three carbon 
atoms, five hydrogen atoms, and three hydroxyl (-OH) groups. Fatty acids 
have a long chain of hydrocarbons to which an acidic carboxyl group (- 
COOH) is attached, hence the name “fatty acid.” The number of carbons in 
the fatty acid may range from 4 to 36; most common are those containing 
12-18 carbons. In a fat molecule, a fatty acid is attached to each of the three 
oxygen atoms in the -OH groups of the glycerol molecule with a covalent 
bond ([link])created by dehydration-synthesis reactions. 


Saturated fatty acid Triglyceride 


Ho Ho Ho Hp 
H H H H H Cc Cc Cc Cc CH 
HO RR Rt Ue Ser ae ae ee 
c iG C Cc fe H—C—O~ He He He He 
i Hp H> He Hp He Ho Ho Hp Ho 
ie ie ie ie le 
a 
H—C—O Ho Hp H2 Hp 
Ho H2 H2 H2 
7 Bee on Be i er aa Oe ae a 
nsaturated fatty aci H.C wv H—-¢—07 Ho Hp Hp Hp 
H 
CH> 
Hoc 
a a eo ae 
No Ne No No NcoF ee Steroid 
|| H2 Ho Ho H it 
2 He He He 
HoC Cc 
‘ ne Hii \ 
CH2 H CH2 
O- ipi Za C. 
Phospholipid HoC b ZA we ZN Yom 
O-—P—O-CH, Cc HC Hp 
8 pee | I! LU 
Hae wor ee 
a a a a ae a 
Heb Nae a Se Se ee 
H2 Hp H2 He Hp 
CN H> H Ho Hp Hp Hp Ho He 
PO oh Oe gn PO OL OP On, 
H,C—O Cc Cc Cc Cc fe C Cc fe CHs 
He Ho Ho Ho He Hp Ho He 


Lipids include fats, such as triglycerides, which are made 
up of fatty acids and glycerol, phospholipids, and 
steroids. 


During this covalent bond formation, three water molecules are released. 
The three fatty acids in the fat may be similar or dissimilar. These fats are 
also called triglycerides because they have three fatty acids. Some fatty 
acids have common names that specify their origin. For example, palmitic 
acid, a saturated fatty acid, is derived from the palm tree. Arachidic acid is 
derived from Arachis hypogaea, the scientific name for peanuts. 


Fatty acids may be saturated or unsaturated. In a fatty acid chain, if there 
are only single bonds between neighboring carbons in the hydrocarbon 
chain, the fatty acid is saturated. Saturated fatty acids are saturated with 
hydrogen; in other words, the number of hydrogen atoms attached to the 


carbon skeleton is maximized. When the hydrocarbon chain contains a 
double bond, the fatty acid is an unsaturated fatty acid. 


Most unsaturated fats are liquid at room temperature and are called oils. If 
there is only one carbon-carbon double bond in the molecule, then it is 
known as a monounsaturated fat (e.g. olive oil), and if there is more than 
one carbon-carbon double bond, then it is known as a polyunsaturated fat 
(e.g. canola oil). 


Saturated fats tend to get packed tightly and are solid at room temperature. 
Animal fats with stearic acid and palmitic acid contained in meat, and the 
fat with butyric acid contained in butter, are examples of saturated fats. 
Mammals store fats in specialized cells called adipocytes, where globules of 
fat occupy most of the cell. In plants, fat or oil is stored in seeds and is used 
as a source of energy during embryonic development. 


Unsaturated fats or oils are usually of plant origin and contain unsaturated 
fatty acids. The double bond causes a bend or a “kink” that prevents the 
fatty acids from packing tightly, keeping them liquid at room temperature. 
Olive oil, corn oil, canola oil, and cod liver oil are examples of unsaturated 
fats. Unsaturated fats help to improve blood cholesterol levels, whereas 
saturated fats contribute to plaque formation in the arteries, which increases 
the risk of a heart attack. 


In the food industry, oils are artificially hydrogenated to make them semi- 
solid, leading to less spoilage and increased shelf life. Simply speaking, 
hydrogen gas is bubbled through oils to solidify them. During this 
hydrogenation process, double bonds of the cis-conformation in the 
hydrocarbon chain may be converted to double bonds in the trans- 
conformation. This forms a trans-fat from a cis-fat. The orientation of the 
double bonds affects the chemical properties of the fat ([link]). 


trans-fat molecule 


During the hydrogenation process, 
the orientation around the double 
bonds is changed, making a trans- 
fat from a cis-fat. This changes the 
chemical properties of the 
molecule. 


Margarine, some types of peanut butter, and shortening are examples of 
artificially hydrogenated trans-fats. Recent studies have shown that an 
increase in trans-fats in the human diet may lead to an increase in levels of 
low-density lipoprotein (LDL), or “bad” cholesterol, which, in turn, may 
lead to plaque deposition in the arteries, resulting in heart disease. Many 
fast food restaurants have recently eliminated the use of trans-fats, and U.S. 
food labels are now required to list their trans-fat content. 


Salmon, trout, and tuna are good sources of omega-3 fatty acids. Omega-3 
fatty acids are important in brain function and normal growth and 
development. They may also prevent heart disease and reduce the risk of 
cancer. 


Like carbohydrates, fats have received a lot of bad publicity. It is true that 
eating an excess of fried foods and other “fatty” foods leads to weight gain. 
However, fats do have important functions. Fats serve as long-term energy 


storage. They also provide insulation for the body. Therefore, “healthy” 
unsaturated fats in moderate amounts should be consumed on a regular 
basis. 


Phospholipids are the major constituent of the plasma membrane. Like 
fats, they are composed of fatty acid chains attached to a glycerol or similar 
backbone. Instead of three fatty acids attached, however, there are two fatty 
acids and the third carbon of the glycerol backbone is bound to a phosphate 
group. The phosphate group is modified by the addition of an alcohol. 


A phospholipid has both hydrophobic and hydrophilic regions. The fatty 
acid chains are hydrophobic and exclude themselves from water, whereas 
the phosphate is hydrophilic and interacts with water. 


Cells are surrounded by a membrane, which has a bilayer of phospholipids. 
The fatty acids of phospholipids face inside, away from water, whereas the 
phosphate group can face either the outside environment or the inside of the 
cell, which are both aqueous. 


Steroids 


Unlike the phospholipids and fats discussed earlier, steroids have a ring 
structure. Although they do not resemble other lipids, they are grouped with 
them because they are also hydrophobic. All steroids have four, linked 
carbon rings and several of them, like cholesterol, have a short tail. 


Cholesterol is a steroid. Cholesterol is mainly synthesized in the liver and is 
the precursor of many steroid hormones, such as testosterone and estradiol. 
It is also the precursor of vitamins E and K. Cholesterol is the precursor of 
bile salts, which help in the breakdown of fats and their subsequent 
absorption by cells. Although cholesterol is often spoken of in negative 
terms, it is necessary for the proper functioning of the body. It is a key 
component of the plasma membranes of animal cells. 


Note: 
Concept in Action 


[ml 


a 


rat le) 


i. 
openstax COLLEGE 


. 


For an additional perspective on lipids, explore “Biomolecules: The 
Lipids” through this interactive animation. 


Proteins 


Proteins are one of the most abundant organic molecules in living systems 
and have the most diverse range of functions of all macromolecules. 
Proteins may be structural, regulatory, contractile, or protective; they may 
serve in transport, storage, or membranes; or they may be toxins or 
enzymes. Each cell in a living system may contain thousands of different 
proteins, each with a unique function. Their structures, like their functions, 
vary greatly. They are all, however, polymers of amino acids, arranged in a 
linear sequence. 


The functions of proteins are very diverse because there are 20 different 
chemically distinct amino acids that form long chains, and the amino acids 
can be in any order. For example, proteins can function as enzymes or 
hormones. Enzymes, which are produced by living cells, are catalysts in 
biochemical reactions (like digestion) and are usually proteins. Catalysts 
speed up chemical reactions by lowering the amount of energy required to 
Start them. Each enzyme is specific for the substrate (a reactant that binds to 
an enzyme) upon which it acts. Enzymes can function to break molecular 
bonds, to rearrange bonds, or to form new bonds. An example of an enzyme 
is salivary amylase, which breaks down amylose, a component of starch. 


Hormones are chemical signaling molecules, usually proteins or steroids, 
secreted by an endocrine gland or group of endocrine cells that act to 
control or regulate specific physiological processes, including growth, 
development, metabolism, and reproduction. For example, insulin is a 
protein hormone that maintains blood glucose levels. 


Proteins have different shapes and molecular weights; some proteins are 
globular in shape whereas others are fibrous in nature. For example, 
hemoglobin is a globular protein, but collagen, found in our skin, is a 
fibrous protein. Protein shape is critical to its function. Changes in 
temperature, pH, and exposure to chemicals may lead to permanent changes 
in the shape of the protein, leading to a loss of function or denaturation (to 
be discussed in more detail later). All proteins are made up of different 
arrangements of the same 20 kinds of amino acids. 


Amino acids are the monomers that make up proteins. Each amino acid has 
the same fundamental structure, which consists of a central carbon atom 
bonded to an amino group (—NH>), a carboxyl group (-COOH), and a 
hydrogen atom. Every amino acid also has another variable atom or group 
of atoms bonded to the central carbon atom known as the R group. The R 
group is the only difference in structure between the 20 amino acids; 
otherwise, the amino acids are identical ({link]). 


Fundamental structure 
Hydrogen 
; H 
Amino | Carboxyl 


group group 
H2N——C——COOH 


Alanine Valine 


H H 


H2N—— C——COOH H2N—— C——COOH 


CH3 


Lysine Aspartic acid 


H 
H2N——C—COOH H»aN—C—COOH 
(CH2)4 CH2 


NH2 


Amino acids are made up of a 
central carbon bonded to an 
amino group (—NH>), a 
carboxyl group (-COOH), and a 
hydrogen atom. The central 
carbon’s fourth bond varies 
among the different amino 
acids, as seen in these examples 
of alanine, valine, lysine, and 
aspartic acid. 


The chemical nature of the R group determines the chemical nature of the 
amino acid within its protein (that is, whether it is acidic, basic, polar, or 
nonpolar). 


The sequence and number of amino acids ultimately determine a protein’s 
shape, size, and function. Each amino acid is attached to another amino acid 
by a covalent bond, known as a peptide bond, which is formed by a 
dehydration reaction. The carboxyl group of one amino acid and the amino 
group of a second amino acid combine, releasing a water molecule. The 
resulting bond is the peptide bond. 


The products formed by such a linkage are called polypeptides. While the 
terms polypeptide and protein are sometimes used interchangeably, a 
polypeptide is technically a polymer of amino acids, whereas the term 
protein is used for a polypeptide or polypeptides that have combined 
together, have a distinct shape, and have a unique function. 


Protein Structure 


As discussed earlier, the shape of a protein is critical to its function. To 
understand how the protein gets its final shape or conformation, we need to 
understand the four levels of protein structure: primary, secondary, tertiary, 
and quaternary ([link]). 


The unique sequence and number of amino acids in a polypeptide chain is 
its primary structure. The unique sequence for every protein is ultimately 
determined by the gene (i.e. a section of DNA) that encodes (i.e. has the 
information to make) the protein. Any change in the gene sequence may 
lead to a different amino acid being added to the polypeptide chain, causing 
a change in protein structure and function. In sickle cell anemia, the 
hemoglobin B chain has a single amino acid substitution, causing a change 
in both the structure and function of the protein. What is most remarkable to 
consider is that a hemoglobin molecule is made up of two alpha chains and 
two beta chains that each consist of about 150 amino acids. The molecule, 
therefore, has about 600 amino acids. The structural difference between a 
normal hemoglobin molecule and a sickle cell molecule—that dramatically 


decreases life expectancy in the affected individuals—is a single amino acid 
of the 600. 


Because of this change of one amino acid in the chain, the normally 
biconcave, or disc-shaped, red blood cells assume a crescent or “sickle” 
shape, which clogs arteries. This can lead to a myriad of serious health 
problems, such as breathlessness, dizziness, headaches, and abdominal pain 
for those who have this disease. 


Folding patterns resulting from interactions between the non-R group 
portions of amino acids give rise to the secondary structure of the protein. 
The most common are the alpha (a)-helix and beta (f)-pleated sheet 
structures. Both structures are held in shape by hydrogen bonds. In the 
alpha helix, the bonds form between every fourth amino acid and cause a 
twist in the amino acid chain. 


In the B-pleated sheet, the “pleats” are formed by hydrogen bonding 
between atoms on the backbone of the polypeptide chain. The R groups are 
attached to the carbons, and extend above and below the folds of the pleat. 
The pleated segments align parallel to each other, and hydrogen bonds form 
between the same pairs of atoms on each of the aligned amino acids. The a- 
helix and B-pleated sheet structures are found in many globular and fibrous 
proteins. 


The unique three-dimensional structure of a polypeptide is known as its 
tertiary structure. This structure is caused by chemical interactions between 
various amino acids and regions of the polypeptide. Primarily, the 
interactions among R groups create the complex three-dimensional tertiary 
structure of a protein. There may be ionic bonds formed between R groups 
on different amino acids, or hydrogen bonding beyond that involved in the 
secondary structure. When protein folding takes place, the hydrophobic R 
groups of nonpolar amino acids lay in the interior of the protein, whereas 
the hydrophilic R groups lay on the outside. The former types of 
interactions are also known as hydrophobic interactions. 


In nature, some proteins are formed from several polypeptides, also known 
as subunits, and the interaction of these subunits forms the quaternary 
structure. Weak interactions between the subunits help to stabilize the 


overall structure. For example, hemoglobin is a combination of four 
polypeptide subunits. 


Amino acids 
Primary protein structure 
sequence of a chain of 
amino acids 


Beta-pleated Secondary protein structure 

sheet hydrogen bonding of the peptide 
backbone causes the amino 
acids to fold into a repeating 
pattern 


Beta-pleated 
sheet 
Alpha helix 


The four levels of protein structure can 
be observed in these illustrations. (credit: 
modification of work by National Human 

Genome Research Institute) 


Quaternary protein structure 
protein consisting of more 
than one amino acid chain 


Each protein has its own unique sequence and shape held together by 
chemical interactions. If the protein is subject to changes in temperature, 
pH, or exposure to chemicals, the protein structure may change, losing its 


shape in what is known as denaturation. Denaturation is often reversible 
because the primary structure is preserved if the denaturing agent is 
removed, allowing the protein to resume its function. Sometimes 
denaturation is irreversible, leading to a loss of function. One example of 
protein denaturation can be seen when an egg is fried or boiled. The 
albumin protein in the liquid egg white is denatured when placed in a hot 
pan, changing from a clear substance to an opaque white substance. Not all 
proteins are denatured at high temperatures; for instance, bacteria that 
survive in hot springs have proteins that are adapted to function at those 
temperatures. 


Note: 
Concept in Action 


ti 
= openstax COLLEGE 
even 


For an additional perspective on proteins, explore “Biomolecules: The 
Proteins” through this interactive animation. 


Nucleic Acids 


Nucleic acids are key macromolecules in the continuity of life. They carry 
the genetic blueprint of a cell and carry instructions for the functioning of 
the cell. 


The two main types of nucleic acids are deoxyribonucleic acid (DNA) and 
ribonucleic acid (RNA). DNA is the genetic material found in all living 
organisms, ranging from single-celled bacteria to multicellular mammals. 


The other type of nucleic acid, RNA, is mostly involved in protein 
synthesis. The DNA molecules never leave the nucleus, but instead use an 
RNA intermediary to communicate with the rest of the cell. Other types of 
RNA are also involved in protein synthesis and its regulation. 


DNA and RNA are made up of monomers known as nucleotides. The 
nucleotides combine with each other to form a polynucleotide, DNA or 
RNA. Each nucleotide is made up of three components: a nitrogenous base, 
a pentose (five-carbon) sugar, and a phosphate group ((link]). Each 
nitrogenous base in a nucleotide is attached to a sugar molecule, which is 
attached to a phosphate group. DNA nucleotides contain the sugar 
deoxyribose and one of the four bases adenine (A),thymine (T), guanine (G), 
or cytosine (C). RNA nucleotides contain the sugar ribose and one of the 
four bases A,uracil (U),G,or C. 


N NH, 


il Nitrogenous base 
c= oO —_— a fe) 

oO 
Phosphate 


OH 
Sugar 


A nucleotide is made up of three 
components: a nitrogenous base, a 
pentose sugar, and a phosphate group. 


DNA Double-Helical Structure 


DNA has a double-helical structure ({link]). It is composed of two strands, 
or polymers, of nucleotides. Each strand is formed with bonds between 
phosphate and sugar groups of adjacent nucleotides (called a 
phosphodiester bond). The two strands are bonded to each other at their 
bases with hydrogen bonds, and the strands coil about each other along their 
length, hence the “double helix” description, which means a double spiral. 


The double-helix 
model shows DNA 
as two parallel 
strands of 
intertwining 
molecules. (credit: 
Jerome Walker, 
Dennis Myts) 


The alternating sugar and phosphate groups lie on the outside of each 
strand, forming the backbone of the DNA. The nitrogenous bases are 
stacked in the interior, like the steps of a staircase, and these bases pair; the 
pairs are bound to each other by hydrogen bonds. The bases pair in such a 
way that the distance between the backbones of the two strands is the same 
all along the molecule. 


Section Summary 


Living things are carbon-based because carbon plays such a prominent role 
in the chemistry of living things. The four covalent bonding positions of the 
carbon atom can give rise to a wide diversity of compounds with many 
functions, accounting for the importance of carbon in living things. 
Carbohydrates are a group of macromolecules that are a vital energy source 
for the cell, provide structural support to many organisms, and can be found 
on the surface of the cell as receptors or for cell recognition. Carbohydrates 
are Classified as monosaccharides, disaccharides, and polysaccharides, 
depending on the number of monomers in the molecule. 


Lipids are a class of macromolecules that are nonpolar and hydrophobic in 
nature. Major types include fats and oils, waxes, phospholipids, and 
steroids. Fats and oils are a stored form of energy and can include 
triglycerides. Fats and oils are usually made up of fatty acids and glycerol. 


Proteins are a class of macromolecules that can perform a diverse range of 
functions for the cell. They help in metabolism by providing structural 
support and by acting as enzymes, carriers or as hormones. The building 
blocks of proteins are amino acids. Proteins are organized at four levels: 
primary, secondary, tertiary, and quaternary. Protein shape and function are 
intricately linked; any change in shape caused by changes in temperature, 
pH, or chemical exposure may lead to protein denaturation and a loss of 
function. 


Nucleic acids are molecules made up of repeating units of nucleotides that 
direct cellular activities such as cell division and protein synthesis. Each 


nucleotide is made up of a pentose sugar, a nitrogenous base, and a 
phosphate group. There are two types of nucleic acids: DNA and RNA. 


Multiple Choice 


Exercise: 


Problem: An example of a monosaccharide is 


a. fructose 

b. glucose 

c. galactose 

d. all of the above 


Solution: 


D 


Exercise: 


Problem:Cellulose and starch are examples of 


a. monosaccharides 
b. disaccharides 

c. lipids 

d. polysaccharides 


Solution: 
D 
Exercise: 


Problem: Phospholipids are important components of 


a. the plasma membrane of cells 

b. the ring structure of steroids 

c. the waxy covering on leaves 

d. the double bond in hydrocarbon chains 


Solution: 


A 


Exercise: 


Problem:The monomers that make up proteins are called 


a. nucleotides 
b. disaccharides 
c. amino acids 
d. chaperones 


Solution: 


C 


Free Response 


Exercise: 
Problem: 


Explain at least three functions that lipids serve in plants and/or 
animals. 


Solution: 


Fat serves as a valuable way for animals to store energy. It can also 
provide insulation. Phospholipids and steroids are important 
components of cell membranes. 


Exercise: 


Problem: 


Explain what happens if even one amino acid is substituted for another 
in a polypeptide chain. Provide a specific example. 


Solution: 


A change in gene sequence can lead to a different amino acid being 
added to a polypeptide chain instead of the normal one. This causes a 


change in protein structure and function. For example, in sickle cell 
anemia, the hemoglobin £6 chain has a single amino acid substitution. 
Because of this change, the disc-shaped red blood cells assume a 
crescent shape, which can result in serious health problems. 


Glossary 


amino acid 
a monomer of a protein 


carbohydrate 
a biological macromolecule in which the ratio of carbon to hydrogen to 
oxygen is 1:2:1; carbohydrates serve as energy sources and structural 
support in cells 


cellulose 
a polysaccharide that makes up the cell walls of plants and provides 
structural support to the cell 


chitin 
a type of carbohydrate that forms the outer skeleton of arthropods, 
such as insects and crustaceans, and the cell walls of fungi 


denaturation 
the loss of shape in a protein as a result of changes in temperature, pH, 
or exposure to chemicals 


deoxyribonucleic acid (DNA) 
a double-stranded polymer of nucleotides that carries the hereditary 
information of the cell 


disaccharide 
two sugar monomers that are linked together by a peptide bond 


enzyme 
a catalyst in a biochemical reaction that is usually a complex or 
conjugated protein 


fat 
a lipid molecule composed of three fatty acids and a glycerol 
(triglyceride) that typically exists in a solid form at room temperature 


glycogen 
a storage carbohydrate in animals 


hormone 
a chemical signaling molecule, usually a protein or steroid, secreted by 
an endocrine gland or group of endocrine cells; acts to control or 
regulate specific physiological processes 


lipids 
a class of macromolecules that are nonpolar and insoluble in water 


macromolecule 
a large molecule, often formed by polymerization of smaller 
monomers 


monosaccharide 
a single unit or monomer of carbohydrates 


nucleic acid 
a biological macromolecule that carries the genetic information of a 
cell and carries instructions for the functioning of the cell 


nucleotide 
a monomer of nucleic acids; contains a pentose sugar, a phosphate 
group, and a nitrogenous base 


oil 
an unsaturated fat that is a liquid at room temperature 
phospholipid 


a major constituent of the membranes of cells; composed of two fatty 
acids and a phosphate group attached to the glycerol backbone 


polypeptide 


a long chain of amino acids linked by peptide bonds 


polysaccharide 
a long chain of monosaccharides; may be branched or unbranched 


protein 
a biological macromolecule composed of one or more chains of amino 
acids 


ribonucleic acid (RNA) 
a single-stranded polymer of nucleotides that is involved in protein 
synthesis 


saturated fatty acid 
a long-chain hydrocarbon with single covalent bonds in the carbon 
chain; the number of hydrogen atoms attached to the carbon skeleton is 
maximized 


starch 
a storage carbohydrate in plants 


steroid 
a type of lipid composed of four fused hydrocarbon rings 


trans-fat 
a form of unsaturated fat with the hydrogen atoms neighboring the 
double bond across from each other rather than on the same side of the 
double bond 


triglyceride 
a fat molecule; consists of three fatty acids linked to a glycerol 
molecule 


unsaturated fatty acid 
a long-chain hydrocarbon that has one or more than one double bonds 
in the hydrocarbon chain 


Introduction 
class="introduction' 


(a) Nasal 
sinus cells 
(viewed with 
a light 
microscope), 
(b) onion 
cells (viewed 
with a light 
microscope), 
and (c) Vibrio 
tasmaniensis 
bacterial cells 
(viewed using 
a scanning 
electron 
microscope) 
are from very 
different 
organisms, 
yet all share 
certain 
characteristic 
s of basic cell 
structure. 
(credit a: 
modification 
of work by 
Ed Uthman, 
MD; credit b: 
modification 
of work by 
Umberto 
Salvagnin; 
credit c: 


modification 
of work by 
Anthony 
D'Onofrio; 
scale-bar data 
from Matt 
Russell) 


Close your eyes and picture a brick wall. What is the basic building block 
of that wall? It is a single brick, of course. Like a brick wall, your body is 
composed of basic building blocks, and the building blocks of your body 

are cells. 


Your body has many kinds of cells, each specialized for a specific purpose. 
Just as a home is made from a variety of building materials, the human 
body is constructed from many cell types. For example, epithelial cells 
protect the surface of the body and cover the organs and body cavities 
within. Bone cells help to support and protect the body. Cells of the immune 
system fight invading bacteria. Additionally, red blood cells carry oxygen 
throughout the body. Each of these cell types plays a vital role during the 
growth, development, and day-to-day maintenance of the body. In spite of 
their enormous variety, however, all cells share certain fundamental 
characteristics. In this chapter, these characteristics will be examined in 
greater detail. 


Prokaryotic and Eukaryotic Cells 
By the end of this section, you will be able to: 


e Name examples of prokaryotic and eukaryotic organisms 
e Compare and contrast prokaryotic cells and eukaryotic cells 
¢ Describe the relative sizes of different kinds of cells 


Cells fall into one of two broad categories: prokaryotic and eukaryotic. The 
predominantly single-celled organisms of the domains Bacteria and 
Archaea are classified as prokaryotes (pro- = before; -karyon- = nucleus). 
Animal cells, plant cells, fungi, and protists are eukaryotes (eu- = true). 


Components of Prokaryotic Cells 


All cells share four common components: 1) a plasma membrane, an outer 
covering that separates the cell’s interior from its surrounding environment; 
2) cytoplasm, consisting of a jelly-like region within the cell in which other 
cellular components are found; 3) DNA, the genetic material of the cell; and 
4) ribosomes, particles that synthesize proteins. However, prokaryotes differ 
from eukaryotic cells in several ways. 


A prokaryotic cell is a simple, single-celled (unicellular) organism that 
lacks a nucleus, or any other membrane-bound organelle. We will shortly 
come to see that this is significantly different in eukaryotes. Prokaryotic 
DNA is found in the central part of the cell: a darkened region called the 
nucleoid ([link]). 


Cell 
membrane 


Chromosome Nucleoid region 
(DNA) 


This figure shows the generalized 
structure of a prokaryotic cell. 


Eukaryotic Cells 


In nature, the relationship between form and function is apparent at all 
levels, including the level of the cell, and this will become clear as we 
explore eukaryotic cells. The principle “form follows function” is found in 
many contexts. For example, birds and fish have streamlined bodies that 
allow them to move quickly through the medium in which they live, be it 
air or water. It means that, in general, one can deduce the function of a 
structure by looking at its form, because the two are matched. 


A eukaryotic cell is a cell that has a membrane-bound nucleus and other 
membrane-bound compartments or sacs, called organelles, which have 
specialized functions. The word eukaryotic means “true kernel” or “true 
nucleus,” alluding to the presence of the membrane-bound nucleus in these 
cells. The word “organelle” means “little organ,” and, as already mentioned, 
organelles have specialized cellular functions, just as the organs of your 
body have specialized functions. 


Cell Size 


At 0.1-5.0 micrometers (im; 1/1,000,000 of a meter) in diameter, 
prokaryotic cells are significantly smaller than eukaryotic cells, which have 
diameters ranging from 10-100 pm ({link]). The small size of prokaryotes 
allows ions and organic molecules that enter them to quickly spread to other 
parts of the cell. Similarly, any wastes produced within a prokaryotic cell 
can quickly move out. However, larger eukaryotic cells have evolved 
different structural adaptations to enhance cellular transport. Indeed, the 
large size of these cells would not be possible without these adaptations. In 
general, cell size is limited because volume increases much more quickly 
than does cell surface area. This is because volume is a cubic dimension 
and surface area is a squared dimension. For example, if X=2, then the 
surface area (x squared) is 4 and the volume (x cubed) is 8. If x =3, then the 
surface area is 9 and the volume is 27. As a cell becomes larger, it becomes 
more and more difficult for the cell to acquire sufficient materials to support 
the processes inside the cell, because the relative size of the surface area 
across which materials must be transported declines. 


Animal 
cell 


Mitochondria 


Protein 


iy 


Lipids Ostrich ‘Adult 
Bacteria egg female 


0.1 nm inm 10 nm 100 nm 1yum 10 um 100 pm 1mm 10 mm 100 mm 1m 
Naked eye 


Light microscope 


Electron microscope 


This figure shows the relative sizes of different kinds of cells 
and cellular components. An adult human is shown for 


comparison. Note that a light microscope is required to view 
both prokaryotic and eukaryotic cells. Note: 1000 nanometers 
equals 1 micrometer, 1000 micrometers equals 1 millimeter, 
and 1000 millimeters equals one meter. 


Section Summary 


Prokaryotes are predominantly single-celled organisms of the domains 
Bacteria and Archaea. All prokaryotes have plasma membranes, cytoplasm, 
ribosomes, a cell wall, DNA, and lack membrane-bound organelles. Many 
also have polysaccharide capsules. Prokaryotic cells range in diameter from 
0.1—5.0 ppm. 


Like a prokaryotic cell, a eukaryotic cell has a plasma membrane, 
cytoplasm, and ribosomes, but a eukaryotic cell is typically larger than a 
prokaryotic cell, has a true nucleus (meaning its DNA is surrounded by a 
membrane), and has other membrane-bound organelles that allow for 
compartmentalization of functions. Eukaryotic cells tend to be 10 to 100 
times the size of prokaryotic cells. 


Multiple Choice 


Exercise: 


Problem: Which of these do all prokaryotes and eukaryotes share? 


a. nuclear envelope 
b. cell walls 

c. organelles 

d. plasma membrane 


Solution: 


D 
Exercise: 


Problem: 


A typical prokaryotic cell compared to a 
eukaryotic cell. 


a. is smaller in size by a factor of 100 

b. is similar in size 

c. is smaller in size by a factor of one million 
d. is larger in size by a factor of 10 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


What are organelles and which type of cells (prokaryotic or 
eukaryotic) contains them? 


Solution: 
Organelles are membrane-bound compartments or sacs that have 
specialized functions in eukaryotic cells. 

Glossary 

eukaryotic cell 


a cell that has a membrane-bound nucleus and several other 
membrane-bound compartments or sacs 


organelle 
a membrane-bound compartment or sac within a cell 


prokaryotic cell 
a unicellular organism that lacks a nucleus or any other membrane- 
bound organelle 


A More Detailed Look at Eukaryotic Cells 
By the end of this section, you will be able to: 


e Describe the structure of eukaryotic animal cells 

e State the role of the plasma membrane 

e Summarize the functions of the major cell organelles 
e Describe the cytoskeleton and extracellular matrix 


At this point, it should be clear that eukaryotic cells have a more complex 
structure than do prokaryotic cells. Organelles and other cellular 
components allow for various functions to occur in the cell at the same 
time. Before discussing the functions of organelles within a eukaryotic cell, 
let us first examine two important components of the cell: the plasma 
membrane and the cytoplasm. 


Note: 
Art Connection 


This figure shows a typical animal cell. 


Nucleus Cytoskeleton 
Nuclear envelope: Microtubules: form the 
membrane enclosing | mitotic spindle and 
the nucleus. Protein-lined maintain cell shape. 
pores allow material to Centrosome: microtubule- 
move in and out. organizing center. 
Chromatin: DNA plus Intermediate filaments: 
associated proteins. fibrous proteins that hold 
Nucleolus: organelles in place. 


condensed region Microfilaments: 
where ribosomes fibrous proteins; 


are formed. form the cellular 
cortex. 
Peroxisome: Plasma 
metabolizes membrane 


waste 
Lysosome: 

digests food and 
waste materials. 


Golgi apparatus: 
modifies proteins. 


Endoplasmic 

reticulum 
Rough: associated 
with ribosomes; 
makes secretory and 
membrane proteins. 
Smooth: makes lipids. 


Cytoplasm 


Mitochondria: 
produce energy. 


(a) 


The Plasma Membrane 


Like prokaryotes, eukaryotic cells have a plasma membrane ((link]) made 
up of a phospholipid bilayer with embedded proteins that separates the 
internal contents of the cell from its surrounding environment. A 
phospholipid is a lipid molecule composed of two fatty acid chains, a 
glycerol backbone, and a phosphate group. The plasma membrane regulates 
the passage of some substances, such as organic molecules, ions, and water, 
preventing the passage of some to maintain internal conditions, while 
actively bringing in or removing others. Other compounds move passively 
across the membrane. 


Glycoprotein: protein with Glycolipid: lipid with 
lak carbohydrate attached J carbohydrate 
attached 


Peripheral membrane Phospholipid 
protein bilayer 
Integral membrane Cholesterol , 
protein i Protein channel 


Filaments of the cytoskeleton 


The plasma membrane is a phospholipid bilayer with 
embedded proteins. There are other components, such as 
cholesterol and carbohydrates, which can be found in the 

membrane in addition to phospholipids and protein. The phrase 
"fluid mosaic" is used to describe the structure of the plasma 
membrane because it is dynamic and contains numerous 
components. 


The plasma membranes of cells that specialize in absorption are folded into 
fingerlike projections called microvilli (singular = microvillus). This 
folding increases the surface area of the plasma membrane. Such cells are 
typically found lining the small intestine, the organ that absorbs nutrients 
from digested food. This is an excellent example of form matching the 
function of a structure. 


People with celiac disease have an immune response to gluten, which is a 
protein found in wheat, barley, and rye. The immune response damages 
microvilli, and thus, afflicted individuals cannot absorb nutrients. This leads 
to malnutrition, cramping, and diarrhea. Patients suffering from celiac 
disease must follow a gluten-free diet. 


The Cytoplasm 


The cytoplasm comprises the contents of a cell between the plasma 
membrane and the nuclear envelope (a structure to be discussed shortly). It 
is made up of organelles suspended in the gel-like cytosol, the cytoskeleton, 
and various chemicals. Even though the cytoplasm consists of 70 to 80 
percent water, it has a semi-solid consistency, which comes from the 
proteins within it. However, proteins are not the only organic molecules 
found in the cytoplasm. Glucose and other simple sugars, polysaccharides, 
amino acids, nucleic acids, fatty acids, and derivatives of glycerol are found 
there too. Ions of sodium, potassium, calcium, and many other elements are 
also dissolved in the cytoplasm. Many metabolic reactions, including 
protein synthesis, take place in the cytoplasm. 


The Endomembrane System 


The endomembrane system (endo = within) is a group of membranes and 
organelles ({link]) in eukaryotic cells that work together to modify, package, 
and transport lipids and proteins. It includes the nuclear envelope, 
lysosomes, and vesicles, the endoplasmic reticulum and Golgi apparatus, 
which we will cover shortly. Although not technically within the cell, the 
plasma membrane is included in the endomembrane system because, as you 
will see, it interacts with the other endomembranous organelles. 


The Nucleus 


Typically, the nucleus is the most prominent organelle in a cell. The 
nucleus (plural = nuclei) houses the cell’s DNA in the form of chromatin 
and directs the synthesis of ribosomes and proteins. Let us look at it in more 
detail ({link]). 


Endoplasmic 
reticulum 


Nucleolus 


Chromatin 


Nucleoplasm 


Nuclear pore 


Nuclear envelope 


The outermost boundary of the 
nucleus is the nuclear envelope. 
Notice that the nuclear envelope 
consists of two phospholipid bilayers 
(membranes)—an outer membrane 
and an inner membrane—in contrast 
to the plasma membrane ((link]), 
which consists of only one 
phospholipid bilayer. (credit: 
modification of work by NIGMS, 
NIH) 


The nuclear envelope is a double-membrane structure that constitutes the 
outermost portion of the nucleus ([link]). Both the inner and outer 
membranes of the nuclear envelope are phospholipid bilayers. 


The nuclear envelope is punctuated with pores that control the passage of 
ions, molecules, and RNA between the nucleoplasm and the cytoplasm. The 
DNA in the nucleus is too large to fit through the pores. 


To understand chromatin, it is helpful to first consider chromosomes. 
Chromosomes are structures within the nucleus that are made up of DNA 
(the hereditary material) and proteins. This combination of DNA and 
proteins is called chromatin. In eukaryotes, chromosomes are linear 


structures. Every species has a specific number of chromosomes in the 
nucleus of its body cells. For example, in humans, the chromosome number 
is 46, whereas in fruit flies, the chromosome number is eight. 


Chromosomes are only visible and distinguishable from one another when 
the cell is getting ready to divide. This is because the DNA condenses or 
compacts in preparation for cell division. When the cell is in the growth and 
maintenance phases of its life cycle, the chromosomes resemble an 
unwound, jumbled bunch of threads and the DNA is more accessible to be 
used to make proteins. 


We already know that the nucleus directs the synthesis of ribosomes, but 
how does it do this? Some chromosomes have sections of DNA that encode 
ribosomal RNA. A darkly staining area within the nucleus, called the 
nucleolus (plural = nucleoli), aggregates the ribosomal RNA with 
associated proteins to assemble the ribosomal subunits that are then 
transported through the nuclear pores into the cytoplasm. 


The Endoplasmic Reticulum 


The endoplasmic reticulum (ER) ((link]) is a series of interconnected 
membranous tubules that collectively modify proteins and synthesize lipids. 
However, these two functions are performed in separate areas of the 
endoplasmic reticulum: the rough endoplasmic reticulum and the smooth 
endoplasmic reticulum, respectively. 


The rough endoplasmic reticulum (RER) is so named because the 
ribosomes attached to its cytoplasmic surface give it a studded appearance 
when viewed through an electron microscope. 


The ribosomes synthesize proteins while attached to the ER, resulting in 
transfer of their newly synthesized proteins into the lumen of the RER 
where they undergo modifications such as folding or addition of sugars. The 
RER also makes phospholipids for cell membranes. 


If the phospholipids or modified proteins are not destined to stay in the 
RER, they will be packaged within vesicles and transported from the RER 
by budding from the membrane ([link]). Since the RER is engaged in 
modifying proteins that will be secreted from the cell, it is abundant in cells 
that secrete proteins, such as the liver. 


The smooth endoplasmic reticulum (SER) is continuous with the RER 
but has few or no ribosomes on its cytoplasmic surface (see [link]). The 
SER’s functions include synthesis of carbohydrates, lipids (including 
phospholipids), and steroid hormones; detoxification of medications and 
poisons; alcohol metabolism; and storage of calcium ions. 


The Golgi Apparatus 


We have already mentioned that vesicles can bud from the ER, but where 
do the vesicles go? Before reaching their final destination, the lipids or 
proteins within the transport vesicles need to be sorted, packaged, and 
tagged so that they wind up in the right place. The sorting, tagging, 
packaging, and distribution of lipids and proteins take place in the Golgi 
apparatus (also called the Golgi body), a series of flattened membranous 
sacs ([link]). 


18 e 
~s 8 trans face °_* 
7 iad 


* 


Golgi apparatus 


& 


The Golgi apparatus in this transmission 
electron micrograph of a white blood cell is 


visible as a stack of semicircular flattened 
rings in the lower portion of this image. 
Several vesicles can be seen near the Golgi 
apparatus. (credit: modification of work by 
Louisa Howard; scale-bar data from Matt 
Russell) 


The Golgi apparatus has a receiving face near the endoplasmic reticulum 
and a releasing face on the side away from the ER, toward the cell 
membrane. The transport vesicles that form from the ER travel to the 
receiving face, fuse with it, and empty their contents into the lumen of the 
Golgi apparatus. As the proteins and lipids travel through the Golgi, they 
undergo further modifications. The most frequent modification is the 
addition of short chains of sugar molecules. The newly modified proteins 
and lipids are then tagged with small molecular groups to enable them to be 
routed to their proper destinations. 


Finally, the modified and tagged proteins are packaged into vesicles that 
bud from the opposite face of the Golgi. While some of these vesicles, 
transport vesicles, deposit their contents into other parts of the cell where 
they will be used, others, secretory vesicles, fuse with the plasma 
membrane and release their contents outside the cell. 


The amount of Golgi in different cell types again illustrates that form 
follows function within cells. Cells that engage in a great deal of secretory 
activity (such as cells of the salivary glands that secrete digestive enzymes 
or cells of the immune system that secrete antibodies) have an abundant 
number of Golgi. 


Lysosomes 


cc 


In animal cells, the lysosomes are the cell’s “garbage disposal.” Digestive 
enzymes within the lysosomes aid the breakdown of proteins, 
polysaccharides, lipids, nucleic acids, and even worn-out organelles. In 


single-celled eukaryotes, lysosomes are important for digestion of the food 
they ingest and the recycling of organelles. These enzymes are active at a 
much lower pH (more acidic) than those located in the cytoplasm. Many 
reactions that take place in the cytoplasm could not occur at a low pH, thus 
the advantage of compartmentalizing the eukaryotic cell into organelles is 
apparent. 


Lysosomes also use their hydrolytic enzymes to destroy disease-causing 
organisms that might enter the cell. A good example of this occurs in a 
group of white blood cells called macrophages, which are part of your 
body’s immune system. In a process known as phagocytosis, a section of 
the plasma membrane of the macrophage invaginates (folds in) and engulfs 
a pathogen. The invaginated section, with the pathogen inside, then pinches 
itself off from the plasma membrane and becomes a vesicle. The vesicle 
fuses with a lysosome. The lysosome’s hydrolytic enzymes then destroy the 
pathogen ({link]). 


Bacterium Vesicle 


_\ 


Macrophage 


A macrophage has phagocytized a 
potentially pathogenic bacterium into 
a vesicle, which then fuses with a 
lysosome within the cell so that the 
pathogen can be destroyed. Other 
organelles are present in the cell, but 
for simplicity, are not shown. 


Vesicles 


Vesicles are membrane-bound sacs that function in storage and transport. 
Vesicles can fuse with other membranes within the cell system. 


Note: 
Art Connection 


Plasma membrane 


The endomembrane system works to modify, 
package, and transport lipids and proteins. 


(credit: modification of work by Magnus 
Manske) 


Ribosomes 


Ribosomes are the cellular structures responsible for protein synthesis. 
When viewed through an electron microscope, free ribosomes appear as 
either clusters or single tiny dots floating freely in the cytoplasm. 
Ribosomes may be attached to either the cytoplasmic side of the plasma 
membrane or the cytoplasmic side of the endoplasmic reticulum. Electron 
microscopy has shown that ribosomes consist of large and small subunits. 
Ribosomes are enzyme complexes that are responsible for protein synthesis. 


Because protein synthesis is essential for all cells, ribosomes are found in 
practically every cell, although they are smaller in prokaryotic cells. They 
are particularly abundant in immature red blood cells for the synthesis of 
hemoglobin, which functions in the transport of oxygen throughout the 
body. 


Mitochondria 


Mitochondria (singular = mitochondrion) are often called the 
“powerhouses” or “energy factories” of a cell because they are responsible 
for making adenosine triphosphate (ATP), the cell’s main energy-carrying 
molecule. The formation of ATP from the breakdown of glucose is known 
as cellular respiration. Mitochondria are oval-shaped, double-membrane 
organelles ({link]) that have their own ribosomes and DNA. Each 
membrane is a phospholipid bilayer embedded with proteins. The inner 
layer has folds called cristae, which increase the surface area of the inner 
membrane. The area surrounded by the folds is called the mitochondrial 
matrix. The cristae and the matrix have different roles in cellular 
respiration. 


In keeping with our theme of form following function, it is important to 
point out that muscle cells have a very high concentration of mitochondria 
because muscle cells need a lot of energy to contract. 


Mitochondrial 
matrix 


Cristae 


Outer 
membrane 


Inner 
membrane 


This transmission electron micrograph shows a 
mitochondrion as viewed with an electron 
microscope. Notice the inner and outer 
membranes, the cristae, and the mitochondrial 
matrix. (credit: modification of work by Matthew 
Britton; scale-bar data from Matt Russell) 


Section Summary 


Like a prokaryotic cell, a eukaryotic cell has a plasma membrane, 
cytoplasm, and ribosomes, but a eukaryotic cell is typically larger than a 
prokaryotic cell, has a true nucleus (meaning its DNA is surrounded by a 
membrane), and has other membrane-bound organelles that allow for 
compartmentalization of functions. The plasma membrane is a phospholipid 
bilayer embedded with proteins. The nucleolus within the nucleus is the site 
for ribosome assembly. Ribosomes are found in the cytoplasm or are 
attached to the cytoplasmic side of the plasma membrane or endoplasmic 
reticulum. They perform protein synthesis. Mitochondria perform cellular 


respiration and produce ATP. Vesicles are storage and transport 
compartments. 


The endomembrane system includes the nuclear envelope, the endoplasmic 
reticulum, Golgi apparatus, lysosomes, vesicles, as well as the plasma 


membrane. These cellular components work together to modify, package, 
tag, and transport membrane lipids and proteins. 


Art Connections 


Exercise: 


Problem: 


[link] Why does the cis face of the Golgi not face the plasma 
membrane? 


Solution: 
[link] Because that face receives chemicals from the ER, which is 
toward the center of the cell. 

Multiple Choice 


Exercise: 
Problem: 


Which of the following is found both in eukaryotic and prokaryotic 
cells? 


a. nucleus 

b. mitochondrion 
c. vessicle 

d. ribosome 


Solution: 


D 
Exercise: 
Problem: 


Which of the following is not a component of the endomembrane 
system? 


a. mitochondrion 

b. Golgi apparatus 

c. endoplasmic reticulum 
d. lysosome 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


In the context of cell biology, what do we mean by form follows 
function? What are at least two examples of this concept? 


Solution: 


“Form follows function” refers to the idea that the function of a body 
part dictates the form of that body part. As an example, organisms like 
birds or fish that fly or swim quickly through the air or water have 
streamlined bodies that reduce drag. At the level of the cell, in tissues 
involved in secretory functions, such as the salivary glands, the cells 
have abundant Golgi. 


Glossary 


cell wall 
a rigid cell covering made of cellulose in plants, peptidoglycan in 
bacteria, non-peptidoglycan compounds in Archaea, and chitin in fungi 
that protects the cell, provides structural support, and gives shape to 
the cell 


central vacuole 
a large plant cell organelle that acts as a storage compartment, water 
reservoir, and site of macromolecule degradation 


chloroplast 
a plant cell organelle that carries out photosynthesis 


cilium 
(plural: cilia) a short, hair-like structure that extends from the plasma 
membrane in large numbers and is used to move an entire cell or move 
substances along the outer surface of the cell 


cytoplasm 
the entire region between the plasma membrane and the nuclear 
envelope, consisting of organelles suspended in the gel-like cytosol, 
the cytoskeleton, and various chemicals 


cytoskeleton 
the network of protein fibers that collectively maintains the shape of 
the cell, secures some organelles in specific positions, allows 
cytoplasm and vesicles to move within the cell, and enables unicellular 
organisms to move 


cytosol 
the gel-like material of the cytoplasm in which cell structures are 
suspended 


desmosome 
a linkage between adjacent epithelial cells that forms when cadherins 
in the plasma membrane attach to intermediate filaments 


endomembrane system 


the group of organelles and membranes in eukaryotic cells that work 
together to modify, package, and transport lipids and proteins 


endoplasmic reticulum (ER) 
a series of interconnected membranous structures within eukaryotic 
cells that collectively modify proteins and synthesize lipids 


extracellular matrix 
the material, primarily collagen, glycoproteins, and proteoglycans, 
secreted from animal cells that holds cells together as a tissue, allows 
cells to communicate with each other, and provides mechanical 
protection and anchoring for cells in the tissue 


flagellum 
(plural: flagella) the long, hair-like structure that extends from the 
plasma membrane and is used to move the cell 


gap junction 
a channel between two adjacent animal cells that allows ions, 
nutrients, and other low-molecular weight substances to pass between 
the cells, enabling the cells to communicate 


Golgi apparatus 
a eukaryotic organelle made up of a series of stacked membranes that 
sorts, tags, and packages lipids and proteins for distribution 


lysosome 
an organelle in an animal cell that functions as the cell’s digestive 
component; it breaks down proteins, polysaccharides, lipids, nucleic 
acids, and even worn-out organelles 


mitochondria 
(singular: mitochondrion) the cellular organelles responsible for 
carrying out cellular respiration, resulting in the production of ATP, the 
cell’s main energy-carrying molecule 


nuclear envelope 


the double-membrane structure that constitutes the outermost portion 
of the nucleus 


nucleolus 
the darkly staining body within the nucleus that is responsible for 
assembling ribosomal subunits 


nucleus 
the cell organelle that houses the cell’s DNA and directs the synthesis 
of ribosomes and proteins 


peroxisome 
a small, round organelle that contains hydrogen peroxide, oxidizes 
fatty acids and amino acids, and detoxifies many poisons 


plasma membrane 
a phospholipid bilayer with embedded (integral) or attached 
(peripheral) proteins that separates the internal contents of the cell 
from its surrounding environment 


plasmodesma 
(plural: plasmodesmata) a channel that passes between the cell walls of 
adjacent plant cells, connects their cytoplasm, and allows materials to 
be transported from cell to cell 


ribosome 
a cellular structure that carries out protein synthesis 


rough endoplasmic reticulum (RER) 
the region of the endoplasmic reticulum that is studded with ribosomes 
and engages in protein modification 


smooth endoplasmic reticulum (SER) 
the region of the endoplasmic reticulum that has few or no ribosomes 
on its cytoplasmic surface and synthesizes carbohydrates, lipids, and 
steroid hormones; detoxifies chemicals like pesticides, preservatives, 
medications, and environmental pollutants, and stores calcium ions 


tight junction 
a firm seal between two adjacent animal cells created by protein 
adherence 


vacuole 
a membrane-bound sac, somewhat larger than a vesicle, that functions 


in cellular storage and transport 


vesicle 
a small, membrane-bound sac that functions in cellular storage and 
transport; its membrane is capable of fusing with the plasma 
membrane and the membranes of the endoplasmic reticulum and Golgi 
apparatus 


A More Detailed Look At The Cell Membrane 
By the end of this section, you will be able to: 


e Understand the fluid mosaic model of membranes 
e Describe the functions of phospholipids, proteins, and carbohydrates in 
membranes 


A cell’s plasma membrane defines the boundary of the cell and determines 
the nature of its contact with the environment. Cells exclude some 
substances, take in others, and excrete still others, all in controlled 
quantities. Plasma membranes enclose the borders of cells, but rather than 
being a static bag, they are dynamic and constantly in flux. The plasma 
membrane must be sufficiently flexible to allow certain cells, such as red 
blood cells and white blood cells, to change shape as they pass through 
narrow capillaries. These are the more obvious functions of a plasma 
membrane. In addition, the surface of the plasma membrane carries markers 
that allow cells to recognize one another, which is vital as tissues and 
organs form during early development, and which later plays a role in the 
“self” versus “non-self” distinction of the immune response. 


The plasma membrane also carries receptors, which are attachment sites for 
specific substances that interact with the cell. Each receptor is structured to 
bind with a specific substance. For example, surface receptors of the 
membrane create changes in the interior, such as changes in enzymes of 
metabolic pathways. These metabolic pathways might be vital for providing 
the cell with energy, making specific substances for the cell, or breaking 
down cellular waste or toxins for disposal. Receptors on the plasma 
membrane’s exterior surface interact with hormones or neurotransmitters, 
and allow their messages to be transmitted into the cell. Some recognition 
sites are used by viruses as attachment points. Although they are highly 
specific, pathogens like viruses may evolve to exploit receptors to gain 
entry to a cell by mimicking the specific substance that the receptor is 
meant to bind. This specificity helps to explain why human 
immunodeficiency virus (HIV) or any of the five types of hepatitis viruses 
invade only specific cells. 


Fluid Mosaic Model 


In 1972, S. J. Singer and Garth L. Nicolson proposed a new model of the 
plasma membrane that, compared to earlier understanding, better explained 
both microscopic observations and the function of the plasma membrane. 
This was called the fluid mosaic model. The model has evolved somewhat 
over time, but still best accounts for the structure and functions of the 
plasma membrane as we now understand them. The fluid mosaic model 
describes the structure of the plasma membrane as a mosaic of components 
—including phospholipids, cholesterol, proteins, and carbohydrates—in 
which the components are able to flow and change position, while 
maintaining the basic integrity of the membrane. Both phospholipid 
molecules and embedded proteins are able to diffuse rapidly and laterally in 
the membrane. The fluidity of the plasma membrane is necessary for the 
activities of certain enzymes and transport molecules within the membrane. 
Plasma membranes range from 5—10 nanometers (nm) thick. As a 
comparison, human red blood cells, visible via light microscopy, are 
approximately 8 micrometers (yim) thick, or approximately 1,000 times 
thicker than a plasma membrane. ({Llink]) 


Glycoprotein: protein with Glycolipid: lipid with 
i | 7 carbohydrate 
attached 


carbohydrate attached 


Peripheral membrane Phospholipid 
bilayer 


protein 
Integral membrane Cholesterol 


protein Protein channel 


Filaments of the cytoskeleton 


The fluid mosaic model of the plasma membrane 
structure describes the plasma membrane as a fluid 
combination of phospholipids, cholesterol, 
proteins, and carbohydrates. 


The plasma membrane is made up primarily of a bilayer of phospholipids 
with embedded proteins, carbohydrates, glycolipids, and glycoproteins, and, 
in animal cells, cholesterol. The amount of cholesterol in animal plasma 
membranes regulates the fluidity of the membrane and changes based on 
the temperature of the cell’s environment. In other words, cholesterol acts 
as antifreeze in the cell membrane and is more abundant in animals that live 
in cold climates. 


The main fabric of the membrane is composed of two layers of 
phospholipid molecules, and the polar ends of these molecules (which look 
like a collection of balls in an artist’s rendition of the model) ({link]) are in 
contact with aqueous fluid both inside and outside the cell. Thus, both 
surfaces of the plasma membrane are hydrophilic. In contrast, the interior of 
the membrane, between its two surfaces, is a hydrophobic or nonpolar 
region because of the fatty acid tails. This region has no attraction for water 
or other polar molecules. 


Proteins make up the second major chemical component of plasma 
membranes. Integral proteins are embedded in the plasma membrane and 
may span all or part of the membrane. Integral proteins may serve as 
channels or pumps to move materials into or out of the cell. Peripheral 
proteins are found on the exterior or interior surfaces of membranes, 
attached either to integral proteins or to phospholipid molecules. Both 
integral and peripheral proteins may serve as enzymes, as structural 
attachments for the fibers of the cytoskeleton, or as part of the cell’s 
recognition sites. 


Carbohydrates are the third major component of plasma membranes. They 
are always found on the exterior surface of cells and are bound either to 
proteins (forming glycoproteins) or to lipids (forming glycolipids). These 
carbohydrate chains may consist of 2-60 monosaccharide units and may be 
either straight or branched. Along with peripheral proteins, carbohydrates 
form specialized sites on the cell surface that allow cells to recognize each 
other. 


Note: 


Evolution in Action 

How Viruses Infect Specific Organs 

Specific glycoprotein molecules exposed on the surface of the cell 
membranes of host cells are exploited by many viruses to infect specific 
organs. For example, HIV is able to penetrate the plasma membranes of 
specific kinds of white blood cells called T-helper cells and monocytes, as 
well as some cells of the central nervous system. The hepatitis virus attacks 
only liver cells. 

These viruses are able to invade these cells, because the cells have binding 
sites on their surfaces that the viruses have exploited with equally specific 
glycoproteins in their coats. ({link]). The cell is tricked by the mimicry of 
the virus coat molecules, and the virus is able to enter the cell. Other 
recognition sites on the virus’s surface interact with the human immune 
system, prompting the body to produce antibodies. Antibodies are made in 
response to the antigens (or proteins associated with invasive pathogens). 
These same sites serve as places for antibodies to attach, and either destroy 
or inhibit the activity of the virus. Unfortunately, these sites on HIV are 
encoded by genes that change quickly, making the production of an 
effective vaccine against the virus very difficult. The virus population 
within an infected individual quickly evolves through mutation into 
different populations, or variants, distinguished by differences in these 
recognition sites. This rapid change of viral surface markers decreases the 
effectiveness of the person’s immune system in attacking the virus, because 
the antibodies will not recognize the new variations of the surface patterns. 


Cytoplasm 


HIV docks at and binds to the CD4 
receptor, a glycoprotein on the surface 
of T cells, before entering, or 
infecting, the cell. (credit: 
modification of work by US National 
Institutes of Health/National Institute 
of Allergy and Infectious Diseases) 


Section Summary 


The modern understanding of the plasma membrane is referred to as the 
fluid mosaic model. The plasma membrane is composed of a bilayer of 
phospholipids, with their hydrophobic, fatty acid tails in contact with each 
other. The landscape of the membrane is studded with proteins, some of 


which span the membrane. Some of these proteins serve to transport 
materials into or out of the cell. Carbohydrates are attached to some of the 
proteins and lipids on the outward-facing surface of the membrane. These 
form complexes that function to identify the cell to other cells. The fluid 
nature of the membrane owes itself to the configuration of the fatty acid 
tails, the presence of cholesterol embedded in the membrane (in animal 
cells), and the mosaic nature of the proteins and protein-carbohydrate 
complexes, which are not firmly fixed in place. Plasma membranes enclose 
the borders of cells, but rather than being a static bag, they are dynamic and 
constantly in flux. 


Multiple Choice 


Exercise: 
Problem: 


Which plasma membrane component can be either found on its surface 
or embedded in the membrane structure? 


a. protein 

b. cholesterol 
c. carbohydrate 
d. phospholipid 


Solution: 


A 
Exercise: 


Problem: 


The tails of the phospholipids of the plasma membrane are composed 
of and are 


a. phosphate groups; hydrophobic 
b. fatty acid groups; hydrophilic 


c. phosphate groups; hydrophilic 
d. fatty acid groups; hydrophobic 
Solution: 


D 


Free Response 


Exercise: 


Problem: 
Why is it advantageous for the cell membrane to be fluid in nature? 
Solution: 
The fluidity of the cell membrane is necessary for the operation of 
some enzymes and transport mechanisms within the membrane. 
Glossary 
fluid mosaic model 
a model of the structure of the plasma membrane as a mosaic of 


components, including phospholipids, cholesterol, proteins, and 
glycolipids, resulting in a fluid rather than static character 


Passive Transport Mechanisms 
By the end of this section, you will be able to: 


e Explain why and how passive transport occurs 

e Understand the processes of simple diffusion, facilitated diffusion, and 
osmosis 

¢ Define tonicity and describe its relevance to passive transport 

e Predict changes in osmosis and cell shape on the basis of tonicity 
differences 


Plasma membranes must allow certain substances to enter and leave a cell, 
while preventing harmful material from entering and essential material from 
leaving. In other words, plasma membranes are selectively permeable— 
they allow some substances through but not others. If they were to lose this 
selectivity, the cell would no longer be able to sustain itself, and it would be 
destroyed. Some cells require larger amounts of specific substances than do 
other cells; they must have a way of obtaining these materials from the 
extracellular fluids. This may happen passively, as certain materials move 
back and forth, or the cell may have special mechanisms that ensure 
transport. Most cells expend most of their energy, in the form of adenosine 
triphosphate (ATP), to create and maintain an uneven distribution of ions on 
the opposite sides of their membranes. The structure of the plasma 
membrane contributes to these functions, but it also presents some 
problems. 


The most direct forms of membrane transport are passive. Passive 
transport is a naturally occurring phenomenon and does not require the cell 
to expend energy to accomplish the movement. In passive transport, 
substances move from an area of higher concentration to an area of lower 
concentration in a process called diffusion. Concentration refers to the 
amount of a solute in a volume of solution. The greater the amount of solute 
in the volume, the higher the concentration. A physical space in which there 
is a different concentration of a single substance is said to have a 
concentration gradient. For example, if a drop of food coloring is added to 
a glass of water, the place where the dye lands represents a high solute 
concentration and the rest of the water represents a low solute 


concentration. Over time, the dye will passively move via diffusion until the 
concentration is equal throughout the water. 


Selective Permeability 


Recall that plasma membranes have hydrophilic and hydrophobic regions. 
This characteristic helps the movement of certain materials through the 
membrane and hinders the movement of others. Lipid-soluble material can 
easily slip through the hydrophobic lipid core of the membrane. Substances 
such as the fat-soluble vitamins A, D, E, and K readily pass through the 
plasma membranes in the digestive tract and other tissues. Fat-soluble drugs 
also gain easy entry into cells and are readily transported into the body’s 
tissues and organs. Molecules of oxygen and carbon dioxide, which are 
relative small and nonpolar, pass through by simple diffusion. 


Polar substances, with the exception of water, present problems for the 
membrane. While some polar molecules connect easily with the outside of a 
cell, they cannot readily pass through the lipid core of the plasma 
membrane. Additionally, whereas small ions could easily slip through the 
spaces in the mosaic of the membrane, their charge prevents them from 
doing so. Ions such as sodium, potassium, calcium, and chloride must have 
a special means of penetrating plasma membranes. Simple sugars and 
amino acids also need help with transport across plasma membranes. 


Diffusion 


Diffusion is a passive process of transport. A single substance tends to 
move from an area of high concentration to an area of low concentration 
until the concentration is equal across the space. You are familiar with 
diffusion of substances through the air. For example, think about someone 
opening a bottle of perfume in a room filled with people. The perfume is at 
its highest concentration in the bottle and is at its lowest at the edges of the 
room. The perfume vapor will diffuse, or spread away, from the bottle, and 
gradually, more and more people will smell the perfume as it spreads. 
Materials move within the cell’s cytosol by diffusion, and certain materials 
move through the plasma membrane by diffusion ([link]). Diffusion 
expends no energy. Rather the different concentrations of materials in 


different areas are a form of potential energy, and diffusion is the 
dissipation of that potential energy as materials move down their 
concentration gradients, from high to low. 


Lipid bilayer 
(plasma { 
membrane) 


TIME 


Diffusion through a permeable membrane follows the 
concentration gradient of a substance, moving the substance from 
an area of high concentration to one of low concentration. When 
the concentrations are equal on both sides of the membrane, a 
concentration gradient no longer exists and there is no longer net 
movement of solution in either direction.(credit: modification of 
work by Mariana Ruiz Villarreal) 


Each separate substance in a medium, such as the extracellular fluid, has its 
own concentration gradient, independent of the concentration gradients of 
other materials. Additionally, each substance will diffuse according to that 


gradient. 
Several factors affect the rate of diffusion: 


e Extent of the concentration gradient: The greater the difference in 
concentration, the more rapid the diffusion. The closer the distribution 


of the material gets to equal on both sides, the slower the rate of 
diffusion becomes. 

e Mass of the molecules diffusing: More massive molecules move more 
slowly, because it is more difficult for them to move between the 
molecules of the substance they are moving through; therefore, they 
diffuse more slowly. 

e Temperature: Higher temperatures increase the energy and therefore 
the movement of the molecules, increasing the rate of diffusion. 


Note: 
Concept in Action 


east 
Hi: 


wees, OPenstax COLLEGE” 

ite = ' 

ee o 
For an animation of the diffusion process in action, view this short video 
on cell membrane transport. 


Facilitated transport 


In facilitated transport, also called facilitated diffusion, material moves 
across the plasma membrane with the assistance of transmembrane proteins 
down a concentration gradient (from high to low concentration) without the 
expenditure of cellular energy. However, the substances that undergo 
facilitated transport would otherwise not diffuse easily or quickly across the 
plasma membrane. The solution to moving polar substances and other 
substances across the plasma membrane rests in the proteins that span its 
surface. The material being transported is first attached to protein or 
glycoprotein receptors on the exterior surface of the plasma membrane. 
This allows the material that is needed by the cell to be removed from the 
extracellular fluid. The substances are then passed to specific integral 


proteins that facilitate their passage, because they form channels or pores 
that allow certain substances to pass through the membrane. The integral 
proteins involved in facilitated transport are collectively referred to as 
transport proteins, and they function as either channels for the material or 
carriers. 


Osmosis 


Osmosis is the diffusion of water through a semipermeable membrane 
according to the concentration gradient of water across the membrane. 
Whereas diffusion transports material across membranes and within cells, 
osmosis transports only water across a membrane and the membrane limits 
the diffusion of solutes in the water. Osmosis is a special case of diffusion. 
Water, like other substances, moves from an area of higher concentration to 
one of lower concentration. Imagine a beaker with a semipermeable 
membrane, separating the two sides or halves ({link]). On both sides of the 
membrane, the water level is the same, but there are different 
concentrations on each side of a dissolved substance, or solute, that cannot 
cross the membrane. If the volume of the water is the same, but the 
concentrations of solute are different, then there are also different 
concentrations of water, the solvent, on either side of the membrane. 


Semipermeable membrane 


In osmosis, water always moves from an 
area of higher concentration (of water) to 


one of lower concentration (of water). In this 
system, the solute cannot pass through the 
selectively permeable membrane due to its 
size. 


A principle of diffusion is that the molecules move around and will spread 
evenly throughout the medium if they can. However, only the material 
capable of getting through the membrane will diffuse through it. In this 
example, the solute cannot diffuse through the membrane, but the water 
can. Water has a concentration gradient in this system. Therefore, water will 
diffuse down its concentration gradient, crossing the membrane to the side 
where it is less concentrated. This diffusion of water through the membrane 
—osmosis—will continue until the concentration gradient of water goes to 
zero. Osmosis proceeds constantly in living systems. 


Note: 
Concept in Action 


Oa eo 


—" 
meee OPENStAX COLLEGE” 


Watch this video that illustrates diffusion in hot versus cold solutions. 


Tonicity 


Tonicity describes the amount of solute in a solution. Three terms— 
hypotonic, isotonic, and hypertonic—are used to relate the concentration of 
solutes inside of a cell compared to the concentration of solutes in the fluid 
that contains the cells. In a hypotonic solution, such as tap water, the 


extracellular fluid has a lower concentration of solutes than the fluid inside 
the cell, and water enters the cell. (In living systems, the point of reference 
is always the cytoplasm, so the prefix hypo- means that the extracellular 
fluid has a lower concentration of solutes, than the cell cytoplasm.) It also 
means that the extracellular fluid has a higher concentration of water than 
does the cell. In this situation, water will follow its concentration gradient 
and enter the cell. This may cause an animal cell to burst, or lyse. Note in 
these cases that there is always a net movement of water (the solvent) 
towards the hypertonic solution by the process of osmosis. That is because 
the hypertonic solution has a lower concentration of water and the solute 
can't pass through the membrane. 


In a hypertonic solution (the prefix hyper- refers to the extracellular fluid 
having a higher concentration of solutes than the cell’s cytoplasm), the fluid 
contains less water than the cell does, such as seawater. Because the cell has 
a lower concentration of solutes, the water will leave the cell. In effect, the 
solute is drawing the water out of the cell. This may cause an animal cell to 
shrivel, or crenate. 


In an isotonic solution, the extracellular fluid has the same osmolarity as 
the cell. If the concentration of solutes of the cell matches that of the 
extracellular fluid, there will be no net movement of water into or out of the 
cell. Blood cells in hypertonic, isotonic, and hypotonic solutions take on 
characteristic appearances ({link]). 


Note: 
Art Connection 


Hypertonic Isotonic Hypotonic 
solution solution solution 


1.0 > > 


Osmotic pressure changes the shape of red blood 
cells in hypertonic, isotonic, and hypotonic 
solutions. Note the tonicity terms refer to the 
solution containing the cells versus the solution 
inside the cell. If a cell is immersed in a hypotonic 
solution, then the contents of the cell are 
hypertonic and there is a net movement of water 
into the cell.(credit: modification of work by 
Mariana Ruiz Villarreal) 


Section Summary 


The passive forms of transport, diffusion and osmosis, move material of 
small molecular weight. Substances diffuse from areas of high 
concentration to areas of low concentration, and this process continues until 
the substance is evenly distributed in a system. In solutions of more than 
one substance, each type of molecule diffuses according to its own 
concentration gradient. Many factors can affect the rate of diffusion, 
including concentration gradient, the sizes of the particles that are diffusing, 
and the temperature of the system. 


In living systems, diffusion of substances into and out of cells is mediated 
by the plasma membrane. Some materials diffuse readily through the 
membrane, but others are hindered, and their passage is only made possible 
by protein channels and carriers. The chemistry of living things occurs in 
aqueous solutions, and balancing the concentrations of those solutions is an 
ongoing problem. In living systems, diffusion of some substances would be 
slow or difficult without membrane proteins. 


Art Connections 


Exercise: 


Problem: 


[link] A doctor injects a patient with what he thinks is isotonic saline 
solution. The patient dies, and autopsy reveals that many red blood 
cells have been destroyed. Do you think the solution the doctor 
injected was really isotonic? 


Solution: 


[link] No, it must have been hypotonic, as a hypotonic solution would 
cause water to enter the cells, thereby making them burst. 


Multiple Choice 


Exercise: 


Problem: Water moves via osmosis 


a. throughout the cytoplasm 

b. from an area with a high concentration of other solutes to a lower 
one 

c. from an area with a low concentration of solutes to an area with a 
higher one 

d. from an area with a low concentration of water to one of higher 
concentration 


Solution: 


C 
Exercise: 
Problem: 
The principal force driving movement in diffusion is 
a. temperature 
b. particle size 


c. concentration gradient 
d. membrane surface area 


Free Response 


Exercise: 


Problem: Why does osmosis occur? 


Solution: 


Water moves through a semipermeable membrane in osmosis because 
there is a concentration gradient across the membrane of solute and 
solvent. The solute cannot effectively move to balance the 
concentration on both sides of the membrane, so water moves to 
achieve this balance. 


Glossary 


concentration gradient 
an area of high concentration across from an area of low concentration 


diffusion 
a passive process of transport of low-molecular weight material down 
its concentration gradient 


facilitated transport 
a process by which material moves down a concentration gradient 
(from high to low concentration) using integral membrane proteins 


hypertonic 
describes a solution in which extracellular fluid has higher osmolarity 
than the fluid inside the cell 


hypotonic 
describes a solution in which extracellular fluid has lower osmolarity 
than the fluid inside the cell 


isotonic 
describes a solution in which the extracellular fluid has the same 
osmolarity as the fluid inside the cell 


osmolarity 
the total amount of substances dissolved in a specific amount of 
solution 


osmosis 
the transport of water through a semipermeable membrane from an 
area of high water concentration to an area of low water concentration 
across a membrane 


passive transport 
a method of transporting material that does not require energy 


selectively permeable 
the characteristic of a membrane that allows some substances through 
but not others 


solute 
a substance dissolved in another to form a solution 


tonicity 
the amount of solute in a solution. 


Active Transport Mechanisms 
By the end of this section, you will be able to: 


e Describe how active transport can use ATP energy to move solutes 
against the concentration gradient 

e Describe the general process of endocytosis, including phagocytosis 

e Describe the general process of exocytosis 


Active transport mechanisms require the use of the cell’s energy, usually 
in the form of adenosine triphosphate (ATP). If a substance must move into 
the cell against its concentration gradient, that is, if the concentration of the 
substance inside the cell must be greater than its concentration in the 
extracellular fluid, the cell must use energy to move the substance. Some 
active transport mechanisms move small-molecular weight material, such as 
ions, through the membrane. 


In addition to moving small ions and molecules through the membrane, 
cells also need to remove and take in larger molecules and particles. Some 
cells are even capable of engulfing entire unicellular microorganisms. You 
might have correctly hypothesized that the uptake and release of large 
particles by the cell requires energy. A large particle, however, cannot pass 
through the membrane, even with energy supplied by the cell. 


Primary Active Transport 


There are several types of active transport. The principle one that will be 
discussed is primary active transport, which uses a combination of ATP 
energy and a transport protein to move substances across the membrane 
against the concentration gradient. ATP is hydrolyzed, via an enzyme- 
catalyzed reaction, to ADP and the lost phosphate group attaches to the 
protein. This joining causes a conformational change in the shape of the 
transport protein and the particular substance is moved across the 
membrane against the concentration gradient. An example of primary active 
transport is the sodium-potassium pump, which is involved in nerve 
impulses and is discussed in a later chapter. 


Endocytosis 


Endocytosis is a type of active transport that moves particles, such as large 
molecules, parts of cells, and even whole cells, into a cell. There are 
different variations of endocytosis, but all share a common characteristic: 
The plasma membrane of the cell invaginates, forming a pocket around the 
target particle. The pocket pinches off, resulting in the particle being 
contained in a newly created vacuole that is formed from the plasma 
membrane. 


Phagocytosis Pinocytosis Receptor-mediated 


endocytosis 


@ 


s 
a . * 
rs Large particle * 
2 . ~ " * 
A 
Plasma 
membrane 
Clathrin Receptor 


© 


Vacuole 


©... 
Coated vesicle 


(a) (b) (°c) 


Three variations of endocytosis are shown. (a) In one form of 
endocytosis, phagocytosis, the cell membrane surrounds the 
particle and pinches off to form an intracellular vacuole. (b) In 
another type of endocytosis, pinocytosis, the cell membrane 
surrounds a small volume of fluid and pinches off, forming a 
vesicle. (c) In receptor-mediated endocytosis, uptake of substances 
by the cell is targeted to a single type of substance that binds at the 
receptor on the external cell membrane. (credit: modification of 
work by Mariana Ruiz Villarreal) 


Phagocytosis is the process by which large particles, such as cells, are 
taken in by a cell. For example, when microorganisms invade the human 
body, a type of white blood cell called a neutrophil removes the invader 


through this process, surrounding and engulfing the microorganism, which 
is then destroyed by the neutrophil ((link]). 


Exocytosis 


In contrast to these methods of moving material into a cell is the process of 
exocytosis. Exocytosis is the opposite of the processes discussed above in 
that its purpose is to expel material from the cell into the extracellular fluid. 
A particle enveloped in membrane fuses with the interior of the plasma 
membrane. This fusion opens the membranous envelope to the exterior of 
the cell, and the particle is expelled into the extracellular space ([link]). 


Exocytosis 


Extracellular fluid 


SS Cyctoplasm 


Vesicle 


In exocytosis, a vesicle 
migrates to the plasma 
membrane, binds, and 
releases its contents to the 
outside of the cell. (credit: 
modification of work by 
Mariana Ruiz Villarreal) 


Section Summary 


Primary active transport uses energy stored in ATP to fuel the transport. 
Active transport of small molecular-size material uses integral proteins in 
the cell membrane to move the material—these proteins are analogous to 
pumps. Some pumps, which carry out primary active transport, couple 
directly with ATP to drive their action. 


Endocytosis methods require the direct use of ATP to fuel the transport of 
large particles such as macromolecules; parts of cells or whole cells can be 
engulfed by other cells in a process called phagocytosis. In phagocytosis, a 
portion of the membrane invaginates and flows around the particle, 
eventually pinching off and leaving the particle wholly enclosed by an 
envelope of plasma membrane. The cell expels waste and other particles 
through the reverse process, exocytosis. Wastes are moved outside the cell, 
pushing a membranous vesicle to the plasma membrane, allowing the 
vesicle to fuse with the membrane and incorporating itself into the 
membrane structure, releasing its contents to the exterior of the cell. 


Multiple Choice 


Exercise: 


Problem: 
Active transport must function continuously because 


a. plasma membranes wear out 

b. cells must be in constant motion 

c. facilitated transport opposes active transport 

d. diffusion is constantly moving the solutes in the other direction 


Solution: 


D 


Free Response 


Exercise: 


Problem: 


Where does the cell get energy for active transport processes? 


Solution: 


The cell harvests energy from ATP produced by its own metabolism to 
power active transport processes, such as pumps. 


Glossary 


active transport 
the method of transporting material that requires energy 


electrochemical gradient 
a gradient produced by the combined forces of the electrical gradient 
and the chemical gradient 


endocytosis 
a type of active transport that moves substances, including fluids and 
particles, into a cell 


exocytosis 
a process of passing material out of a cell 


phagocytosis 
a process that takes macromolecules that the cell needs from the 
extracellular fluid; a variation of endocytosis 


pinocytosis 
a process that takes solutes that the cell needs from the extracellular 


fluid; a variation of endocytosis 


receptor-mediated endocytosis 


a variant of endocytosis that involves the use of specific binding 
proteins in the plasma membrane for specific molecules or particles 


Introduction to the Central Dogma of Molecular Biology 
class="introduction" 


This is 
Dolly, the 
first sheep 
produced 

using a 
novel type 

of molecular 
genetic 
technology 
that 
involved 
transfer of 
the nucleus 
from an 
adult udder 
cell to an 
unfertilized 
egg whose 
nucleus had 
been 
removed. 
This egg 
was then 
transplanted 
into another 
female 
sheep to 
undergo 
developmen 
t during 
pregnancy. 


Sheep, as well as humans, normally begin life as a single cell called a 
fertilized egg or zygote. From this one cell, trillions of cells will ultimately 
be derived through the process of cell division. Prior to each cell division 
event, the DNA must replicate. Also, cells must produce proteins needed to 
accomplish specific functions. These events are described by the central 
dogma of molecular biology, which states that DNA contains information to 
replicate itself and that specific regions of the DNA (called genes) contains 
the information needed to make RNA, which is in turn used to produce 
needed proteins. In this chapter, we will learn more about the steps of these 
processes. 


DNA and RNA 
By the end of this section, you will be able to: 


¢ Describe the structures of DNA and RNA 
e Describe how eukaryotic DNA is arranged in the cell 


In the 1950s, Francis Crick and James Watson worked together at the 
University of Cambridge, England, to determine the structure of DNA. 
Other scientists, such as Linus Pauling and Maurice Wilkins, were also 
actively exploring this field. Pauling had discovered the secondary structure 
of proteins using X-ray crystallography. X-ray crystallography is a method 
for investigating molecular structure by observing the patterns formed by 
X-rays shot through a crystal of the substance. The patterns give important 
information about the structure of the molecule of interest. In Wilkins’ lab, 
researcher Rosalind Franklin was using X-ray crystallography to understand 
the structure of DNA. Watson and Crick were able to piece together the 
puzzle of the DNA molecule using Franklin's data ({link]). Watson and 
Crick also had key pieces of information available from other researchers 
such as Chargaff’s rules. Chargaff had shown that of the four kinds of 
monomers (nucleotides) present ina DNA molecule, two types were always 
present in equal amounts and the remaining two types were also always 
present in equal amounts. This meant they were always paired in some way. 
In 1962, James Watson, Francis Crick, and Maurice Wilkins were awarded 
the Nobel Prize in Medicine for their work in determining the structure of 
DNA. 


(b) 


Pioneering scientists (a) James Watson and Francis Crick 


are pictured here with American geneticist Maclyn 
McCarty. Scientist Rosalind Franklin discovered (b) the 
X-ray diffraction pattern of DNA, which helped to 
elucidate its double helix structure. (credit a: 
modification of work by Marjorie McCarty; b: 
modification of work by NIH) 


Now let’s consider the structure of the two types of nucleic acids, 
deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). The building 
blocks of DNA are nucleotides, which are made up of three parts: a 
deoxyribose (a 5-carbon sugar with the carbons designated as 1', 2', 3', 4' 
and 5'), a phosphate group attached to the 5'carbon, and a nitrogenous 
base attached to the 1'carbon([link]). There are four types of nitrogenous 
bases in DNA. Adenine (A) and guanine (G) are double-ringed purines, and 
cytosine (C) and thymine (T) are smaller, single-ringed pyrimidines. The 
nucleotide is named according to the nitrogenous base it contains. 


Pyrimidines 


° 
c A CH 
3 
NZ cH HN~ c~ 
iS e. 
Ca Sn 
H 


(e) 


Thymine 
T 


Purines 


NH2 
| 


N (e 

oe 
HC. Il | HC, ll | 
Ny 


Guanine Adenine 
G A 


(a) Each DNA nucleotide is made up of a sugar, a 
phosphate group, and a base. Four of the five carbon 
atoms in the sugar are not shown to simplify the diagram; 
each point on the ring is where a carbon (1' to 4') would 
be would be located; the position of the 5' carbon is 
above the ring at the point adjacent to an oxygen of the 
phosphate group. (b) Cytosine and thymine are 
pyrimidines. Guanine and adenine are purines. Note: As 


the 2' carbon is attached to an -OH group, the sugar 
shown is actually ribose, not deoxyribose as intended. 


The phosphate group of one nucleotide bonds covalently with the sugar 
molecule of the next nucleotide, and so on, forming a long polymer of 
nucleotide monomers. The sugar—phosphate groups line up in a “backbone” 
for each single strand of DNA, and the nucleotide bases stick out from this 
backbone. The carbon atoms of the five-carbon sugar are numbered 
clockwise from the oxygen as 1’, 2', 3', 4', and 5' (1' is read as “one prime”). 
The phosphate group is attached to the 5' carbon of one nucleotide and the 
3' carbon of the next nucleotide. In its natural state, each DNA molecule is 
actually composed of two single strands held together along their length 
with hydrogen bonds between the bases. 


Watson and Crick proposed that the DNA is made up of two strands that are 
twisted around each other to form a right-handed helix, called a double 
helix. Base-pairing takes place between a purine and pyrimidine: namely, A 
pairs with T, and G pairs with C. In other words, adenine and thymine are 
complementary base pairs, and cytosine and guanine are also 
complementary base pairs. This is the basis for Chargaff’s rule; because of 
their complementarity, there is as much adenine as thymine ina DNA 
molecule and as much guanine as cytosine. Adenine and thymine are 
connected by two hydrogen bonds, and cytosine and guanine are connected 
by three hydrogen bonds. The two strands are anti-parallel in nature; that is, 
one strand will have the 3' carbon of the sugar in the “upward” position, 
whereas the other strand will have the 5' carbon in the upward position. The 
diameter of the DNA double helix is uniform throughout because a purine 
(two rings) always pairs with a pyrimidine (one ring) and their combined 
lengths are always equal. ({link]). 


Hydrogen bonds 
Nitrogenous bases: Thymine _--H2N 
3 5° @==PAdenine 


S 
[== Thymine Os, ree rae . © 
—=—PGuanine -F O \=yj O © 


O 
EEX Cytosine ON ( wp 
1e) Oo *O 

HoN 


Adenine 


oO, _O N ow 
oe = a 
Base pair © o NY NH y—N O86 
sent Cytosine 0. 
Sugar HO Guanine He 9 5 
phosphate 
backbone 
Sugar-phosphate Bases Sugar-phosphate 
3 5’ backbone backbone 


(a) (b) 


DNA (a) forms a double stranded helix, and (b) 
adenine pairs with thymine and cytosine pairs with 
guanine. (credit a: modification of work by Jerome 

Walker, Dennis Myts) 


The Structure of RNA 


There is a second nucleic acid in all cells called ribonucleic acid, or RNA. 
Like DNA, RNA is a polymer of nucleotides. Each of the nucleotides in 
RNA is made up of a nitrogenous base, a five-carbon sugar, and a 
phosphate group. In the case of RNA, the five-carbon sugar is ribose, not 
deoxyribose. Ribose has a hydroxyl group at the 2' carbon, unlike 
deoxyribose, which has only a hydrogen atom ([link]). 


OH H 
Ribose Deoxyribose 


The difference between the ribose 


found in RNA and the deoxyribose 
found in DNA is that ribose has a 
hydroxyl group at the 2' carbon. 


RNA nucleotides contain the nitrogenous bases adenine, cytosine, and 
guanine. However, they do not contain thymine, which is instead replaced 
by uracil, symbolized by a “U.” RNA exists as a single-stranded molecule 
rather than a double-stranded helix. Molecular biologists have named 
several kinds of RNA on the basis of their function. These include 
messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA 
(rRNA)—molecules that are involved in the production of proteins from the 
DNA code. 


How DNA Is Arranged in the Cell 


DNA is a working molecule; it must be replicated when a cell is ready to 
divide, and it must be “read” to produce the molecules, such as proteins, to 
carry out the functions of the cell. For this reason, the DNA is protected and 
packaged in very specific ways. In addition, DNA molecules can be very 
long. Stretched end-to-end, the DNA molecules in a single human cell 
would come to a length of about 2 meters,or 6.5 feet. Thus, the DNA for a 
cell must be packaged in a very ordered way to fit and function within a 
structure (the cell) that is not visible to the naked eye. The chromosomes of 
prokaryotes are much simpler than those of eukaryotes in many of their 
features ({link]). Most prokaryotes contain a single, circular chromosome 
that is found in an area in the cytoplasm called the nucleoid. 


Nucleoid 
(folded 
chromosome) 


Eukaryote Prokaryote 


A eukaryote contains a well-defined nucleus, 
whereas in prokaryotes, the chromosome lies in the 
cytoplasm in an area called the nucleoid. 


The size of the genome in one of the most well-studied prokaryotes, 
Escherichia coli, is 4.6 million base pairs, which would extend a distance of 
about 1.6 millimeters (0.06 inches) if stretched out. So how does this fit 
inside a small bacterial cell? The DNA is twisted beyond the double helix in 
what is known as supercoiling. Some proteins are known to be involved in 
the supercoiling; other proteins and enzymes help in maintaining the 
supercoiled structure. 


Eukaryotes, whose chromosomes each consist of a linear DNA molecule, 
employ a different type of packing strategy to fit their DNA inside the 
nucleus ({link]). At the most basic level, DNA is wrapped around proteins 
known as histones to form structures called nucleosomes. The DNA is 
wrapped tightly around the histone core. This nucleosome is linked to the 
next one by a short strand of DNA that is free of histones. This is also 
known as the “beads on a string” structure; the nucleosomes are the “beads” 
and the short lengths of DNA between them are the “string.” The 
nucleosomes, with their DNA coiled around them, stack compactly onto 
each other to form a 30-nanometers—wide fiber. This fiber is further coiled 
into a thicker and more compact structure. At the metaphase stage of 
mitosis, when the chromosomes are lined up in the center of the cell, the 


chromosomes are at their most compacted. They are approximately 700 
nanometers in width, and are found in association with scaffold proteins. 


In interphase, the phase of the cell cycle between mitoses at which the 
chromosomes are decondensed, eukaryotic chromosomes have two distinct 
regions that can be distinguished by staining. There is a tightly packaged 
region that stains darkly, and a less dense region. The darkly staining 
regions usually contain genes that are not active, and are found in the 
regions of the centromere and telomeres. The lightly staining regions 
usually contain genes that are active, with DNA packaged around 
nucleosomes but not further compacted. 


Organization of Eukaryotic Chromosomes 


DNA double 
helix 


DNA wrapped 
around histone 


Nucleosomes 
coiled into a 
chromatin 
fiber 


Further 
condensation 
of chromatin 


Duplicated 
chromosome 


These figures illustrate the 
compaction of the eukaryotic 


chromosome. 


Note: 
Concept in Action 


— 
mess Openstax COLLEGE 


Route E 
De) age ee 


Watch this animation of DNA packaging. 


Section Summary 


The model of the double-helix structure of DNA was proposed by Watson 
and Crick. The DNA molecule is a polymer of nucleotides. Each nucleotide 
is composed of a nitrogenous base, a five-carbon sugar (deoxyribose), and a 
phosphate group. There are four nitrogenous bases in DNA, two purines 
(adenine and guanine) and two pyrimidines (cytosine and thymine). A DNA 
molecule is composed of two strands. Each strand is composed of 
nucleotides bonded together covalently between the phosphate group of one 
and the deoxyribose sugar of the next. From this backbone extend the bases. 
The bases of one strand bond to the bases of the second strand with 
hydrogen bonds. Adenine always bonds with thymine, and cytosine always 
bonds with guanine. The bonding causes the two strands to spiral around 
each other in a shape called a double helix. Ribonucleic acid (RNA) is a 
second nucleic acid found in cells. RNA is a single-stranded polymer of 
nucleotides. It also differs from DNA in that it contains the sugar ribose, 
rather than deoxyribose, and the nucleotide uracil rather than thymine. 


Various RNA molecules function in the process of forming proteins from 
the genetic code in DNA. 


Eukaryotes contain double-stranded linear DNA molecules packaged into 
chromosomes. The DNA helix is wrapped around proteins to form 
nucleosomes. The protein coils are further coiled, and during mitosis and 
meiosis, the chromosomes become even more greatly coiled to facilitate 
their movement. 


Multiple Choice 


Exercise: 


Problem: Which of the following does cytosine pair with? 


a. guanine 
b. thymine 
c. adenine 
d. a pyrimidine 


Solution: 


A 
Exercise: 
Problem: 


Prokaryotes contain a chromosome, and eukaryotes contain 
chromosomes. 


a. single-stranded circular; single-stranded linear 
b. single-stranded linear; single-stranded circular 
c. double-stranded circular; double-stranded linear 
d. double-stranded linear; double-stranded circular 


Solution: 


C 


Free Response 


Exercise: 


Problem: Describe the organization of the eukaryotic chromosome. 


Solution: 


The DNA is wound around proteins called histones. The histones then 
stack together in a compact form that creates a fiber that is 30-nm 
thick. The fiber is further coiled for greater compactness. 


Exercise: 


Problem: 
Describe the structure and complementary base pairing of DNA. 
Solution: 


A single strand of DNA is a polymer of nucleotides joined covalently 
between the phosphate group of one and the deoxyribose sugar of the 
next to form a phosphodiester “backbone” from which the nitrogenous 
bases stick out. In its natural state, DNA has two strands wound 
around each other in a double helix. The bases on each strand are 
bonded to each other with hydrogen bonds. Only specific bases bond 
with each other; adenine bonds with thymine, and cytosine bonds with 
guanine. 


Glossary 


deoxyribose 


a five-carbon sugar molecule with a hydrogen atom rather than a 
hydroxyl group in the 2' position; the sugar component of DNA 
nucleotides 


double helix 
the molecular shape of DNA in which two strands of nucleotides wind 
around each other in a spiral shape 


nitrogenous base 
a nitrogen-containing molecule that acts as a base; often referring to 
one of the purine or pyrimidine components of nucleic acids 


phosphate group 
a molecular group consisting of a central phosphorus atom bound to 
four oxygen atoms 


The Basics of DNA Replication 
By the end of this section, you will be able to: 


e Explain the process of DNA replication 
e Explain how mutations can cause an effect on the phenotype of an 
organism. 


When a cell divides, it is important that each daughter cell receives an 
identical copy of the DNA. This is accomplished by the process of DNA 
replication. The replication of DNA occurs during the synthesis phase, or S 
phase, of the cell cycle, before the cell enters mitosis or meiosis. 


The elucidation of the structure of the double helix provided a hint as to 
how DNA is copied. Recall that adenine nucleotides pair with thymine 
nucleotides, and cytosine with guanine. This means that the two strands are 
complementary to each other. For example, a strand of DNA witha 
nucleotide sequence of AGTCATGA will have a complementary strand 
with the sequence TCAGTACT ((link]). 

3! 


LL LR) De 
ee a ie ie a ee 


ai 


The two strands of DNA are 
complementary, meaning the sequence of 
bases in one strand can be used to create the 
correct sequence of bases in the other strand. 


Because of the complementarity of the two strands, having one strand 
means that it is possible to recreate the other strand. This model for 
replication suggests that the two strands of the double helix separate during 
replication, and each strand serves as a template from which the new 
complementary strand is copied ((Link]). 


Semi-conservative model of DNA Replication 


The semiconservative model of 
DNA replication is shown. Gray 
indicates the original DNA 
strands, and blue indicates newly 
synthesized DNA. 


During DNA replication, each of the two strands that make up the double 
helix serves as a template from which new strands are copied. The name of 
the enzyme that copies the DNA is called DNA polymerase. It joins the 
complementary nucleotides together to make up the new strand, which is 
complementary to the parental or “old” strand. Each new double helix 
consists of one parental strand and one new daughter strand. This is known 
as semiconservative replication. When two DNA copies are formed, they 
have an identical sequence of nucleotide bases and are divided equally into 
two daughter cells during cell division. Therefore, each of the two daughter 
cells has a complete copy of each chromosome. 


DNA Repair 


DNA polymerase can sometimes make an error by inserting a 
noncomplementary base during DNA replication. Most mistakes are 
quickly corrected; if they are not, they may result in a mutation—defined 
as a permanent change in the DNA sequence. Mutations in genes may lead 
to serious consequences because incorrect proteins are produced. 


Section Summary 


DNA replicates by a semi-conservative method in which each of the two 
parental DNA strands act as a template for new DNA to be synthesized. 
After replication, each DNA has one parental or “old” strand, and one 
daughter or “new” strand. 


Multiple Choice 


Exercise: 


Problem: DNA replicates by which of the following models? 


a. conservative 

b. semiconservative 
c. dispersive 

d. none of the above 


Solution: 


B 


Free Response 


Exercise: 


Problem: 


The sequence one strand of a DNA double helix is: *ATGGCTACAA 
Beginning at the * end, what is the complimentary sequence? 


Solution: 


TACCGATGTT 


Glossary 


DNA ligase 
the enzyme that catalyzes the joining of DNA fragments together 


DNA polymerase 
an enzyme that synthesizes a new strand of DNA complementary to a 
template strand 


helicase 
an enzyme that helps to open up the DNA helix during DNA 
replication by breaking the hydrogen bonds 


lagging strand 
during replication of the 3' to 5' strand, the strand that is replicated in 
short fragments and away from the replication fork 


leading strand 


the strand that is synthesized continuously in the 5' to 3' direction that 
is synthesized in the direction of the replication fork 


mismatch repair 
a form of DNA repair in which non-complementary nucleotides are 
recognized, excised, and replaced with correct nucleotides 


mutation 
a permanent variation in the nucleotide sequence of a genome 


nucleotide excision repair 
a form of DNA repair in which the DNA molecule is unwound and 
separated in the region of the nucleotide damage, the damaged 
nucleotides are removed and replaced with new nucleotides using the 
complementary strand, and the DNA strand is resealed and allowed to 
rejoin its complement 


Okazaki fragments 
the DNA fragments that are synthesized in short stretches on the 
lagging strand 


primer 
a short stretch of RNA nucleotides that is required to initiate 
replication and allow DNA polymerase to bind and begin replication 


replication fork 
the Y-shaped structure formed during the initiation of replication 


semiconservative replication 
the method used to replicate DNA in which the double-stranded 
molecule is separated and each strand acts as a template for a new 
strand to be synthesized, so the resulting DNA molecules are 
composed of one new strand of nucleotides and one old strand of 
nucleotides 


telomerase 
an enzyme that contains a catalytic part and an inbuilt RNA template; 
it functions to maintain telomeres at chromosome ends 


telomere 
the DNA at the end of linear chromosomes 


Transcription 
By the end of this section, you will be able to: 


e Explain the central dogma 
e Explain the main steps of transcription 
e Describe how eukaryotic mRNA is processed 


The second function of DNA (the first was replication) is to provide the 
information needed to construct the proteins necessary so that the cell can 
perform all of its functions. To do this, the DNA is “read” or transcribed 
into an mRNA molecule. The mRNA then provides the code to form a 
protein by a process called translation. Through the processes of 
transcription and translation, a protein is built with a specific sequence of 
amino acids that was originally encoded in the DNA. This module discusses 
the details of transcription. 


The Central Dogma of Molecular Biology: DNA Encodes RNA; 
RNA Encodes Protein 


The flow of genetic information in cells from DNA to mRNA to protein is 
described by the central dogma ([link]), which states that genes specify the 
sequences of mRNAs, which in turn specify the sequences of proteins. 


Protein 


The central dogma of molecular 


biology states that DNA encodes 
RNA, which in turn encodes 
protein. 


The copying of DNA to mRNA (i.e. transcription) is relatively 
straightforward, with one nucleotide being added to the mRNA strand for 
every complementary nucleotide read in the DNA strand. The translation to 
protein is more complex because groups of three mRNA nucleotides 
correspond to one amino acid of the protein sequence. However, as we shall 
see in the next module, the translation to protein is still systematic, such that 
nucleotides 1 to 3 correspond to amino acid 1, nucleotides 4 to 6 correspond 
to amino acid 2, and so on. The groups of three nucleotides that specify an 
amino acid are called codons. 


Transcription: from DNA to mRNA 


With the genes bound in the nucleus, transcription occurs in the nucleus of 
the cell and the mRNA transcript must be transported to the cytoplasm. 
Transcription occurs in three main stages: initiation, elongation, and 
termination. 


Initiation 


Transcription requires the DNA double helix to partially unwind in the 
region of mRNA synthesis. The region of unwinding is called a 
transcription bubble. The DNA sequence onto which the proteins and 
enzymes involved in transcription bind to initiate the process is called a 
promoter. In most cases, promoters exist upstream of the genes they 
regulate. The specific sequence of a promoter is very important because it 
determines whether the corresponding gene is transcribed all of the time, 
some of the time, or hardly at all ([link]). 


DNA RNA 
nontemplate 
strand 


Synthesis ——&, 


RNA polymerase 


DNA 
template 
strand Promoter 


The initiation of transcription begins 
when DNA is unwound, forming a 
transcription bubble. Enzymes and 

other proteins involved in 
transcription bind at the promoter. 


Elongation 


Transcription always proceeds from one of the two DNA strands, which is 
called the template strand. The mRNA product is complementary to the 
template strand and is almost identical to the other DNA strand, called the 
nontemplate strand, with the exception that RNA contains a uracil (U) in 
place of the thymine (T) found in DNA. During elongation, an enzyme 
called RNA polymerase proceeds along the DNA template adding 
nucleotides by base pairing with the DNA template in a manner similar to 
DNA replication, with the difference that an RNA strand is being 
synthesized that does not remain bound to the DNA template. As elongation 
proceeds, the DNA is continuously unwound ahead of the enzyme and 
rewound behind it ([link]). 


Nontemplate strand 


G 


GCACTC 
ATGCCGCA 4 


3’ 
G TACCACGTA 


Oirany; 4 
“Ection of Be eae 3 


ye 
o AI GGTGCAT 


5 


CS 
Uy 
TAcSSS¢o ts CACC CRO CAUS 


3 
TGecotcaGthS 


5! 


DNA RNA polymerase Template strand 


During elongation, RNA polymerase tracks along the 
DNA template, synthesizes mRNA in the 5' to 3 
direction, and unwinds then rewinds the DNA as it is 
read. 


Termination 


Once a gene is transcribed, the RNA polymerase needs to be instructed to 
dissociate from the DNA template and liberate the newly made mRNA. 
Depending on the gene being transcribed, there are two kinds of termination 
signals, but both involve repeated nucleotide sequences in the DNA 
template that result in RNA polymerase stalling, leaving the DNA template, 
and freeing the mRNA transcript. 


Eukaryotic RNA Processing 


The newly transcribed eukaryotic mRNAs must undergo several processing 
steps before they can be transferred from the nucleus to the cytoplasm and 
translated into a protein. 


The mRNA transcript is first coated in RNA-stabilizing proteins to prevent 
it from degrading while it is processed and exported out of the nucleus. This 
occurs while the pre-mRNA still is being synthesized by adding a special 


nucleotide “cap” to the 5' end of the growing transcript. In addition to 
preventing degradation, factors involved in protein synthesis recognize the 
cap to help initiate translation by ribosomes. 


Once elongation is complete, an enzyme then adds a string of 
approximately 200 adenine residues to the 3' end, called the poly-A tail. 
This modification further protects the pre-mRNA from degradation and 
signals to cellular factors that the transcript needs to be exported to the 
cytoplasm. 


Eukaryotic genes are composed of protein-coding sequences called exons 
(ex-on signifies that they are expressed) and intervening sequences called 
introns (int-ron denotes their intervening role). Introns are removed from 
the pre-mRNA during processing. Intron sequences in MRNA do not 
encode functional proteins. It is essential that all of a pre-mRNA’s introns 
be completely and precisely removed before protein synthesis so that the 
exons join together to code for the correct amino acids. If the process errs 
by even a single nucleotide, the sequence of the rejoined exons would be 
shifted, and the resulting protein would be nonfunctional. The process of 
removing introns and reconnecting exons is called splicing (({link]). Introns 
are removed and degraded while the pre-mRNA is still in the nucleus. 


Primary RNA transcript 


u RNA processing 


Spliced RNA 


5' cap Poly-A tail 


5’ untranslated 3’ untranslated 
region region 


Eukaryotic mRNA contains introns that 
must be spliced out. A 5' cap and 3' tail 
are also added. 


Section Summary 


mRNA synthesis is initiated at a promoter sequence on the DNA template. 
Elongation synthesizes new mRNA (called a pre-mRNA). Termination 
liberates the mRNA and occurs by mechanisms that stall the RNA 
polymerase and cause it to fall off the DNA template. Newly transcribed 
mRNAs are modified with a cap and a poly-A tail. These structures protect 
the mature mRNA from degradation and help export it from the nucleus. 
mRNAs also undergo splicing, in which introns are removed and exons are 
reconnected with single-nucleotide accuracy. Only finished mRNAs are 
exported from the nucleus to the cytoplasm. 


Multiple Choice 


Exercise: 


Problem: A promoter is 


a. a specific sequence of DNA nucleotides 
b. a specific sequence of RNA nucleotides 
c. a protein that binds to DNA 

d. an enzyme that synthesizes RNA 


Solution: 


A 
Exercise: 


Problem: 


Portions of eukaryotic MRNA sequence that are removed during RNA 
processing are 


da. exons 


b. caps 
c. poly-A tails 
d. introns 


Solution: 


D 


Glossary 


exon 
a sequence present in protein-coding mRNA after completion of pre- 
mRNA splicing 


intron 
non—protein-coding intervening sequences that are spliced from 
mRNA during processing 


mRNA 
messenger RNA; a form of RNA that carries the nucleotide sequence 
code for a protein sequence that is translated into a polypeptide 
sequence 


nontemplate strand 
the strand of DNA that is not used to transcribe mRNA; this strand is 
identical to the mRNA except that T nucleotides in the DNA are 
replaced by U nucleotides in the mRNA 


promoter 
a sequence on DNA to which RNA polymerase and associated factors 
bind and initiate transcription 


RNA polymerase 
an enzyme that synthesizes an RNA strand from a DNA template 
strand 


splicing 
the process of removing introns and reconnecting exons in a pre- 
mRNA 


template strand 
the strand of DNA that specifies the complementary mRNA molecule 


transcription bubble 
the region of locally unwound DNA that allows for transcription of 
mRNA 


Translation 
By the end of this section, you will be able to: 


e Describe the different steps in protein synthesis 

e Discuss the role of ribosomes in protein synthesis 

e Describe the genetic code and how the nucleotide sequence determines 
the amino acid and the protein sequence 


The synthesis of proteins is one of a cell’s most energy-consuming 
metabolic processes. In turn, proteins account for more mass than any other 
component of living organisms (with the exception of water), and proteins 
perform a wide variety of the functions of a cell. The process of translation, 
or protein synthesis, involves decoding an mRNA message into a 
polypeptide product. Amino acids are covalently strung together in lengths 
ranging from approximately 50 amino acids to more than 1,000. 


The Protein Synthesis Machinery 


In addition to the mRNA template, many other molecules contribute to the 
process of translation. The composition of each component may vary across 
species; for instance, ribosomes may consist of different numbers of 
ribosomal RNAs (rRNA) and polypeptides depending on the organism. 
However, the general structures and functions of the protein synthesis 
machinery are comparable from bacteria to human cells. Translation 
requires the input of an mRNA template, ribosomes, tRNAs, and various 
enzymatic factors ([link]). 


Amino acids 


Growing 


protein chain Ribosome 


tRNA 


mRNA 


The protein synthesis machinery 
includes the large and small 
subunits of the ribosome, mRNA, 
and tRNA. (credit: modification of 
work by NIGMS, NIH) 


Ribosomes are located in the cytoplasm and endoplasmic reticulum of 
eukaryotes. Ribosomes are made up of a large and a small subunit that 
come together for translation. The small subunit is responsible for binding 
the mRNA template, whereas the large subunit sequentially binds tRNAs, a 
type of RNA molecule that brings amino acids to the growing chain of the 
polypeptide. Each mRNA molecule is simultaneously translated by many 
ribosomes, all synthesizing protein in the same direction. 


Depending on the species, 40 to 60 types of tRNA exist in the cytoplasm. 
Serving as adaptors, specific tRNAs bind to sequences on the mRNA 
template and add the corresponding amino acid to the polypeptide chain. 
Therefore, tRNAs are the molecules that actually “translate” the language 
of RNA into the language of proteins. For each tRNA to function, it must 
have its specific amino acid bonded to it. In the process of tRNA 
“charging,” each tRNA molecule is bonded to its correct amino acid. 


The Genetic Code 


To summarize what we know to this point, the cellular process of 
transcription generates messenger RNA (mRNA), a mobile molecular copy 
of one or more genes with an alphabet of A, C, G, and uracil (U). 
Translation of the mRNA template converts nucleotide-based genetic 
information into a protein product. Protein sequences consist of 20 
commonly occurring amino acids; therefore, it can be said that the protein 
alphabet consists of 20 letters. Each amino acid is defined by a three- 
nucleotide sequence called the triplet codon. The relationship between a 
nucleotide codon and its corresponding amino acid is called the genetic 
code. 


Given the different numbers of “letters” in the mRNA and protein 
“alphabets,” combinations of nucleotides corresponded to single amino 
acids. Using a three-nucleotide code means that there are a total of 64 (4 x 4 
x 4) possible combinations; therefore, a given amino acid is encoded by 
more than one nucleotide triplet ({link]). 


Second letter 


uacl™ |ugc}ovs 


UAA Stop|UGA Stop 
UAG Stop|UGG Trp 


First letter 


® 
$ 
= 
E 
=< 
= 


U 
Cc 
A 
G 
U 
Cc 
A 
G 
U 
Cc 
A 
G 
U 
Cc 
A 
G 


This figure shows the genetic code for 
translating each nucleotide triplet, or 


codon, in mRNA into an amino acid 
or a termination signal in a nascent 
protein. (credit: modification of work 
by NIH) 


Three of the 64 codons terminate protein synthesis and release the 
polypeptide from the translation machinery. These triplets are called stop 
codons. Another codon, AUG, also has a special function. In addition to 
specifying the amino acid methionine, it also serves as the start codon to 
initiate translation. The reading frame for translation is set by the AUG start 
codon near the 5' end of the mRNA. The genetic code is universal. With a 
few exceptions, virtually all species use the same genetic code for protein 
synthesis, which is powerful evidence that all life on Earth shares a 
common origin. 


The Mechanism of Protein Synthesis 


Just as with mRNA synthesis, protein synthesis can be divided into three 
phases: initiation, elongation, and termination. 


Protein synthesis begins with the formation of an initiation complex. This 
complex involves the small ribosome subunit, the mRNA template,and a 

tRNA that interacts with the AUG start codon, and is linked to the amino 

acid methionine. 


In polypeptide elongation the large ribosomal subunit consists of three 
compartments: P, A, and E sites. The A site binds incoming charged tRNAs 
(tRNAs with their attached specific amino acids). The P site binds charged 
tRNAs carrying amino acids that have formed bonds with the growing 
polypeptide chain but have not yet dissociated from their corresponding 
tRNA. The E site releases dissociated tRNAs so they can be recharged with 
free amino acids. The ribosome shifts one codon at a time, catalyzing each 
process that occurs in the three sites. With each step, a charged tRNA enters 
the complex, the polypeptide becomes one amino acid longer, and an 
uncharged tRNA departs. 


Ribosome large 
subunit 


Small Ribosomal 
subunit 


Polypeptide chain 


Translation begins when a tRNA 
anticodon recognizes a codon on 
the mRNA. The large ribosomal 
subunit joins the small subunit, 
and a second tRNA is recruited. 
As the mRNA moves relative to 
the ribosome, the polypeptide 
chain is formed. Entry of a release 
factor into the A site terminates 
translation and the components 
dissociate. 


Termination of translation occurs when a stop codon (UAA, UAG, or UGA) 
is encountered. When the ribosome encounters the stop codon, the growing 
polypeptide is released and the ribosome subunits dissociate and leave the 
mRNA. After many ribosomes have completed translation, the mRNA is 
degraded so the nucleotides can be reused in another transcription reaction. 


Note: 
Concept in Action 


Etcta tll 
Ha 


openstax COLLEGE 


Transcribe a gene and translate it to protein using complementary pairing 
and the genetic code at this site. 


Section Summary 


The central dogma describes the flow of genetic information in the cell 
from genes to mRNA to proteins. Genes are used to make MRNA by the 
process of transcription; mRNA is used to synthesize proteins by the 
process of translation. The genetic code is the correspondence between the 
three-nucleotide mRNA codon and an amino acid. The genetic code is 
“translated” by the tRNA molecules, which associate a specific codon with 
a specific amino acid. The genetic code is degenerate because 64 triplet 
codons in mRNA specify only 20 amino acids and three stop codons. This 
means that more than one codon corresponds to an amino acid. Almost 
every species on the planet uses the same genetic code. 


The players in translation include the mRNA template, ribosomes, tRNAs, 
and various enzymatic factors. The small ribosomal subunit binds to the 
mRNA template. Translation begins at the initiating AUG on the mRNA. 
The formation of bonds occurs between sequential amino acids specified by 
the mRNA template according to the genetic code. The ribosome accepts 
charged tRNAs, and as it steps along the mRNA, it catalyzes bonding 
between the new amino acid and the end of the growing polypeptide. The 
entire mRNA is translated in three-nucleotide “steps” of the ribosome. 
When a stop codon is encountered, a release factor binds and dissociates the 
components and frees the new protein. 


Multiple Choice 


Exercise: 


Problem: 
The RNA components of ribosomes are synthesized in the 


a. cytoplasm 

b. nucleus 

c. nucleolus 

d. endoplasmic reticulum 


Solution: 


C 
Exercise: 


Problem: 


How long would the peptide be that is translated from this MRNA 
sequence: 5'-AUGGGCUACCGA-3'? 


ae ot 
WN O&O 


d.4 


Solution: 


D 


Free Response 


Exercise: 


Problem: 


Transcribe and translate the following DNA sequence (nontemplate 
strand): 5'-ATGGCCGGTTATTAAGCA-3' 


Solution: 


The mRNA would be: 5'-AUGGCCGGUUAUUAAGCA-3'. The 
protein would be: Met Ala Gly Tyr. Even though there are six codons, 
the fifth codon corresponds to a stop (UAA) so the sixth codon would 
not be translated. 


Glossary 


codon 
three consecutive nucleotides in mRNA that specify the addition of a 
specific amino acid or the release of a polypeptide chain during 
translation 


genetic code 
the amino acids that correspond to three-nucleotide codons of MRNA 


rRNA 
ribosomal RNA; molecules of RNA that combine to form part of the 
ribosome 


stop codon 
one of the three mRNA codons that specifies termination of translation 


start codon 
the AUG (or, rarely GUG) on an mRNA from which translation 
begins; always specifies methionine 


tRNA 
transfer RNA; an RNA molecule that contains a specific three- 
nucleotide anticodon sequence to pair with the mRNA codon and also 
binds to a specific amino acid 


Homeostasis 
By the end of this section, you will be able to: 


e Explain the concept of homeostasis 
e Describe the general process of thermoregulation in humans 


Before moving on to discussing organ systems, it is important to review the 
concept of internal balance. Homeostasis refers to the relatively stable state 
inside the body. Human organs and organ systems constantly adjust to 
internal and external changes in order to maintain this steady state. 
Examples of internal conditions maintained homeostatically are the level of 
blood glucose, body temperature, and blood calcium level. These conditions 
remain stable because of physiologic processes that result in negative 
feedback relationships. If the blood glucose or calcium rises, this sends a 
signal to organs responsible for lowering blood glucose or calcium. The 
signals that restore the normal levels are examples of negative feedback. 
When homeostatic mechanisms fail, the results can be unfavorable. 
Homeostatic mechanisms keep the body in dynamic equilibrium by 
constantly adjusting to the changes that the body’s systems encounter. Even 
when a person is inactive, he/she is maintaining this homeostatic 
equilibrium. An examples of a factor that is regulated homeostatically is 
body temperature in a process called thermoregulation. 


Homeostasis 


The goal of homeostasis is the maintenance of equilibrium around a specific 
value of some aspect of the body or its cells called a set point. While there 
are normal fluctuations from the set point, the body’s systems will usually 
attempt to go back to this point. A change in the internal or external 
environment is called a stimulus and is detected by a receptor; the response 
of the system is to adjust the activities of the system so the value moves 
back toward the set point. For instance, if the body becomes too warm, 
adjustments are made to cool it. If glucose levels in the blood rise after a 
meal, adjustments are made to lower them and to get the nutrient into 
tissues that need it or to store it for later use. 


When a change occurs in an animal’s environment, an adjustment must be 
made so that the internal environment of the body and cells remains stable. 
The receptor that senses the change in the environment is part of a feedback 
mechanism. The stimulus—temperature, glucose, or calcium levels—is 
detected by the receptor. The receptor sends information to a control center, 
often the brain, which relays appropriate signals to an effector organ that is 
able to cause an appropriate change, either up or down, depending on the 
information the sensor was sending. 


Thermoregulation 


Animals, such as humans, that maintain a constant body temperature in the 
face of differing environmental temperatures, are called endotherms. We 
are able to maintain this temperature by generating internal heat (a waste 
product of the cellular chemical reactions of metabolism) that keeps the 
cellular processes operating optimally even when the environment is cold. 


Endotherms use their circulatory systems to help maintain body 
temperature. Vasodilation, the opening up of arteries to the skin by 
relaxation of their smooth muscles, brings more blood and heat to the body 
surface, facilitating radiation and evaporative heat loss, cooling the body. 
Vasoconstriction, the narrowing of blood vessels to the skin by contraction 
of their smooth muscles, reduces blood flow in peripheral blood vessels, 
forcing blood toward the core and vital organs, conserving heat. 


Thermoregulation is coordinated by the nervous system ([link]). The 
processes of temperature control are centered in a region of the brain called 
the hypothalamus. The hypothalamus maintains the set point for body 
temperature through reflexes that cause vasodilation or vasoconstriction and 
shivering or sweating. The hypothalamus directs the responses that effect 
the changes in temperature loss or gain that return the body to the set point. 
The set point may be adjusted in some instances. During an infection, 
compounds called pyrogens are produced and circulate to the hypothalamus 
resetting the thermostat to a higher value. This allows the body’s 
temperature to increase to a new homeostatic equilibrium point in what is 
commonly called a fever. The increase in body heat makes the body less 


optimal for bacterial growth and increases the activities of cells so they are 
better able to fight the infection. 


Note: 
Art Connection 


Body temperature falls. Body temperature rises. 


N\A’ _\ 


Blood vessels constrict 
so that heat is conserved. 
Sweat glands do not 
secrete fluid. Shivering 


Blood vessels dilate, 
resulting in heat loss to the 
environment. Sweat glands 


secrete fluid. As the fluid 
evaporates, heat is lost 
from the body. 


Normal body 
temperature 

DP Heat is lost to 

Heat is retained. 


The body is able to regulate temperature in response to signals 
from the nervous system. 


(involuntary contraction of 
muscles) generates heat, 
which warms the body. 


Section Summary 


Homeostasis is a dynamic equilibrium that is maintained in body tissues 
and organs. It is dynamic because it is constantly adjusting to the changes 


that the systems encounter. It is an equilibrium because body functions are 
kept within a normal range, with some fluctuations around a set point. 


Art Connections 


Exercise: 
Problem: 
[link] When bacteria are destroyed by leukocytes, pyrogens are 
released into the blood. Pyrogens reset the body’s thermostat to a 


higher temperature, resulting in fever. How might pyrogens cause the 
body temperature to rise? 


Solution: 


[link] Pyrogens increase body temperature by causing the blood 
vessels to constrict, inducing shivering, and stopping sweat glands 
from secreting fluid. 


Review Questions 


Exercise: 


Problem: 


When faced with a sudden drop in environmental temperature, an 
endothermic animal will 


a. experience a drop in its body temperature 
b. wait to see if it goes lower 

c. increase muscle activity to generate heat 
d. add fur or fat to increase insulation 


Solution: 


G 


Exercise: 


Problem: What is the cause of a fever of 38.3 °C (101 °F)? 


a. too much heat produced by the body 

b. upward adjustment of the body temperature set point 
c. inadequate cooling mechanisms in the body 

d. the heat caused by a viral or bacterial infection 


Solution: 


B 


Free Response 


Exercise: 


Problem: Describe how the body’s mechanisms maintain homeostasis? 


Solution: 


The body has a sensor that detects a deviation of the state of the cells 
or the body from the set point. The information is relayed to a control 
center, usually the brain, where signals go to effectors. Those effectors 
cause a negative feedback response that moves the state of the body in 
a direction back toward the set point. 


Glossary 
ectotherm 
an organism that relies primarily on environmental heat sources to 


maintain its body temperature 


endotherm 


an organism that relies primarily on internal heat sources to maintain 
its body temperature 


interstitial fluid 
the fluid found between cells in the body, similar in constitution to the 
fluid component of blood, but without the high concentrations of 
proteins 


kidney 
the organ that performs excretory and osmoregulatory functions 


nephron 
the functional unit of the kidney 


osmoregulation 
the mechanism by which water and solute concentrations are 
maintained at desired levels 


osmotic balance 
the appropriate values of water and solute concentrations for a healthy 
organism 


renal artery 
the artery that delivers blood to the kidney 


renal vein 
the vein that drains blood from the kidney 


set point 
the target value of a physiological state in homeostasis 


ureter 
the urine-bearing tubes coming out of the kidney 


urethra 
the tube that conducts urine from the urinary bladder to the external 
environment 


urinary bladder 


the structure that the ureters empty the urine into 


The Digestive System 
By the end of this section, you will be able to: 


e Explain the processes of digestion (chemical and physical) and 
absorption 

e Explain the specialized functions of the organs involved in processing 
food in the body 

e Describe the ways in which organs work together to digest food and 
absorb nutrients 

e List different digestive enzymes, their location of action, and the 
nutrient that is their substrate 

e Describe how excess carbohydrates and energy are stored in the body 


All living organisms need nutrients to survive. While plants can obtain 
nutrients from their roots and the energy molecules required for cellular 
function through the process of photosynthesis, animals obtain their 
nutrients by the consumption of other organisms. At the cellular level, the 
biological molecules necessary for animal function are amino acids, lipid 
molecules, nucleotides, and simple sugars. However, the food consumed 
consists of protein, fat, and complex carbohydrates. Animals must convert 
these macromolecules into the simple molecules required for maintaining 
cellular function. The conversion of the food consumed to the nutrients 
required is a multistep process involving digestion and absorption. During 
digestion, food particles are broken down to smaller components, which are 
later absorbed by the body. This happens by both physical means, such as 
chewing, and by chemical means, via enzyme-catalyzed reactions. 


One of the challenges in human nutrition is maintaining a balance between 
food intake, storage, and energy expenditure. Taking in more food energy 
than is used in activity leads to storage of the excess in the form of fat 
deposits. The rise in obesity and the resulting diseases like type 2 diabetes 
makes understanding the role of diet and nutrition in maintaining good 
health all the more important. 


The Human Digestive System 


The process of digestion begins in the mouth (oral cavity) with the intake of 
food ({link]). The teeth play an important role in masticating (chewing) or 
physically breaking food into smaller particles. This action not only 
decreases the size of the food particles to facilitate swallowing, but also 
increases surface area for chemical digestion. The enzymes present in saliva 
(amylase and lipase) also begin to chemically break down food (starch and 
fats, respectively). The food is then swallowed and enters the esophagus— 
a long tube that connects the mouth to the stomach. Using peristalsis, or 
wave-like smooth-muscle contractions, the muscles of the esophagus push 
the food toward the stomach. The stomach contents are extremely acidic, 
with a pH between 1.5 and 2.5. This acidity kills microorganisms, breaks 
down food tissues, and activates digestive enzymes. Further breakdown of 
food takes place in the small intestine where bile produced by the liver, and 
enzymes produced by the small intestine and the pancreas, continue the 
process of digestion. The smaller molecules are absorbed into the blood 
stream through the epithelial cells lining the walls of the small intestine. 
The waste material travels on to the large intestine where water is absorbed 
and the drier waste material is compacted into feces; it is stored in the 
rectum until it is excreted through the anus. 


Oral cavity 


Esophagus 


Liver Stomach 


Gall bladder 


Small intestine 
Pancreas 


Cecum 


Large intestine 


The components of the human 
digestive system are shown. The 
GI tract is the tube that includes the 
oral cavity, esophagus, stomach, 
small intestine, large intestine, and 
rectum. The accessory organs are 
those that indirectly join to this 
tube via ducts and include the 
salivary glands, liver, gall bladder, 
and pancreas. 


Oral Cavity 


Both physical and chemical digestion begin in the mouth or oral cavity, 
which is the point of entry of food into the digestive system. The food is 
broken into smaller particles by mastication, the chewing action of the 


teeth. All mammals have teeth and can chew their food to begin the process 


of physically breaking it down into smaller particles. 


The chemical process of digestion begins during chewing as food mixes 
with saliva, produced by the salivary glands ((link]). Saliva contains 
mucus that moistens food and buffers the pH of the food. Saliva also 
contains lysozyme, which has antibacterial action. It also contains an 
enzyme called salivary amylase that begins the process of converting 
starches in the food into a disaccharide called maltose. Another enzyme 
called lipase is produced by cells in the tongue to break down fats. The 
chewing and wetting action provided by the teeth and saliva prepare the 
food into a mass called the bolus for swallowing. The tongue helps in 
swallowing—moving the bolus from the mouth into the pharynx. The 
pharynx opens to two passageways: the esophagus and the trachea. The 
esophagus leads to the stomach and the trachea leads to the lungs. The 
epiglottis is a flap of tissue that covers the tracheal opening during 
swallowing to prevent food from entering the lungs. 


Nasal cavity 


Salivary glands: 
Parotid 

Teeth Sublingual 
Submandibular 


(a) (b) 


(a) Digestion of food begins in the mouth. (b) Food is 


masticated by teeth and moistened by saliva secreted from the 
salivary glands. Enzymes in the saliva begin to digest starches 
and fats. With the help of the tongue, the resulting bolus is 
moved into the esophagus by swallowing. (credit: modification 
of work by Mariana Ruiz Villareal) 


Esophagus 


The esophagus is a tubular organ that connects the mouth to the stomach. 
The chewed and softened food (i.e. the bolus) passes through the esophagus 
after being swallowed. The smooth muscles of the esophagus undergo 
peristalsis (contractions) that pushes the food toward the stomach. The 
peristaltic wave is unidirectional—it moves food from the mouth the 
stomach, and reverse movement is not possible, except in the case of the 
vomit reflex. The peristaltic movement of the esophagus is an involuntary 
reflex; it takes place in response to the act of swallowing and you don't 
exert conscious control over it. 


Ring-like muscles called sphincters form valves in the digestive system. 
The gastro-esophageal sphincter (a.k.a. lower esophageal or cardiac 
sphincter) is located at the stomach end of the esophagus. In response to 
swallowing and the pressure exerted by the bolus of food, this sphincter 
opens, and the bolus enters the stomach. When there is no swallowing 
action, this sphincter is shut and prevents the contents of the stomach from 
traveling up the esophagus. Acid reflux or “heartburn” occurs when the 
acidic digestive juices escape back into the esophagus and the low pH 
irritates the unprotected surface. Prolonged and repeated exposure of the 
esophagus to this acidity can cause physical damage. 


Stomach 


A large part of protein digestion occurs in the stomach ({link]). The 
stomach is a saclike organ that secretes gastric digestive juices. 


Protein digestion is carried out by an enzyme called pepsin in the stomach 
chamber. The highly acidic environment kills many microorganisms in the 
food and, combined with the action of the enzyme pepsin, results in the 
catabolism of protein in the food. Chemical digestion is facilitated by the 
churning action of the stomach caused by contraction and relaxation of 
smooth muscles. The partially digested food and gastric juice mixture is 
called chyme. Gastric emptying occurs within two to six hours after a meal. 
Only a small amount of chyme is released into the small intestine at a time. 
The movement of chyme from the stomach into the small intestine is 
regulated by hormones, stomach distension and muscular reflexes that 
influence the pyloric sphincter. The low pH of the stomach will denature the 
amylase and lipase that were secreted in the mouth. Therefore, over time, 
chemical digestion of starches and fats will decrease in the stomach. 


The stomach lining is unaffected by pepsin and the acidity because pepsin is 
released in an inactive form (pepsinogen) that is activated by the low pH. 
The stomach also has a thick mucus lining that protects the underlying 
tissue. 


Small Intestine 


Chyme moves from the stomach to the small intestine. The small intestine 
is the organ where the digestion of protein, fats, and carbohydrates is 
completed. The small intestine is a long tube-like organ with a highly 
folded surface containing finger-like projections called the villi. The top 
surface of each villus has many microscopic projections called microvilli. 
The epithelial cells at the surface of these structures absorb nutrients from 
the digested food and release them to the bloodstream on the other side. 
Methods of transport previously discussed (e.g.active transport)are used 
during this movement. The villi and microvilli, with their many folds, 
increase the surface area of the small intestine and increase absorption 
efficiency of the nutrients. 


The human small intestine is over 6 m (19.6 ft) long and is divided into 
three parts: the duodenum, the jejunum and the ileum. The duodenum is 
separated from the stomach by the pyloric sphincter. The chyme is mixed 
with pancreatic juices, an alkaline/basic solution rich in bicarbonate that 
neutralizes the acidity of chyme from the stomach. This result raises the pH 
and creates an environment that is appropriate for enzymes. Pancreatic 
juices contain several digestive enzymes (amylase, trypsin, and lipase) that 
break down starches, proteins, and fats, respectively. Bile is produced in the 
liver and stored and concentrated in the gallbladder; it enters the duodenum 
through the bile duct. Bile contains bile salts, which make lipids accessible 
to the water-soluble enzymes. This is accomplished via a process called 
emulsification, a type of physical digestion. Bile keeps fat droplets from 
coming back together again, thus increasing the surface area available to 
lipase. The wall of the small intestines secrete disaccharidases, which 
faciltate digestion of disaccharides (e.g. maltose, sucrose, and lactose) into 
their respective monosaccharides. The monosaccharides, amino acids, bile 
salts, vitamins, and other nutrients are absorbed by the cells of the intestinal 
lining. 


The undigested food is sent to the colon from the ileum via peristaltic 
movements. The ileum ends and the large intestine begins at the ileocecal 
valve. The vermiform, “worm-like,” appendix is located at the ileocecal 
valve. The appendix of humans has a minor role in immunity. 


Large Intestine 


The large intestine reabsorbs the water from indigestible food material and 
processes the waste material ([link]). The human large intestine is much 
smaller in length compared to the small intestine but larger in diameter. It 
has three parts: the cecum, the colon, and the rectum. The cecum joins the 
ileum to the colon and is the receiving pouch for the waste matter. The 
colon is home to many bacteria or “intestinal flora” that aid in the digestive 
processes. The colon has four regions, the ascending colon, the transverse 
colon, the descending colon and the sigmoid colon. The main functions of 
the colon are to extract the water and mineral salts from undigested food, 
and to store waste material. 


Transverse 
colon 


Ascending 
colon 


Descending 
colon 


Cecum 


Vermiform Sigmoid 
appendix colon 
Rectum 


Anus 


The large intestine reabsorbs water from 
undigested food and stores waste until it is 
eliminated. (credit: modification of work by 
Mariana Ruiz Villareal) 


The rectum ([link]) stores feces until defecation. The feces are propelled 
using peristaltic movements during elimination. The anus is an opening at 
the far-end of the digestive tract and is the exit point for the waste material. 
Two sphincters regulate the exit of feces, the inner sphincter is involuntary 
and the outer sphincter is voluntary. 


Accessory Organs 


The organs discussed above are the organs of the digestive tract through 
which food passes. Accessory organs add secretions and enzymes that break 
down food into nutrients. Accessory organs include the salivary glands, the 
liver, the pancreas, and the gall bladder. The secretions of the liver, 
pancreas, and gallbladder are regulated by hormones in response to food 
consumption. 


The liver is the largest internal organ in humans and it plays an important 
role in digestion of fats and detoxifying blood. The liver produces bile, a 
digestive juice that is required for the breakdown of fats in the duodenum. 
The liver also processes the absorbed vitamins and fatty acids and 
synthesizes many plasma proteins. The gallbladder is a small organ that 
aids the liver by storing bile and concentrating bile salts. 


The pancreas secretes bicarbonate that neutralizes the acidic chyme and a 
variety of enzymes (trypsin, amylase, and lipase) for the digestion of 
proteins, carbohydrates, and fats, respectively. 


Note: 
Art Connection 


Liver 
Stomach 


Gallbladder 
Pancreas 


Colon 


Transverse colon Small Intestine 


A di | Duodenum 
scending colon Jejunum 
Descending colon ta - BTA” Ue lleum 


Cecum 


Appendix 


The stomach has an extremely acidic environment where most of 
the protein gets digested. (credit: modification of work by Mariana 
Ruiz Villareal) 


Nutrition 


The human diet should be well balanced to provide nutrients required for 
bodily function and the minerals and vitamins required for maintaining 
structure and regulation necessary for good health and reproductive 
capability ({link]). 


Vegetables ry 


Choose OV 


For humans, a balanced diet 
includes fruits, vegetables, 
grains, protein, and dairy. 
(credit: USDA) 


Note: 
Concept in Action 


. 
— . 
meee, OPENStAX COLLEGE 


ae 
(a) Ne. 


Explore this interactive United States Department of Agriculture website to 
learn more about each food group and the recommended daily amounts. 


The organic molecules required for building cellular material and tissues 
must come from food. During digestion, digestible carbohydrates are 
ultimately broken down into glucose and used to provide energy within the 
cells of the body. Complex carbohydrates, including polysaccharides, can 
be broken down into glucose through biochemical modification; however, 
humans do not produce the enzyme necessary to digest cellulose (fiber). 
The intestinal flora in the human gut are able to extract some nutrition from 
these plant fibers. These plant fibers are known as dietary fiber and are an 
important component of the diet. The excess sugars in the body are 
converted into glycogen and stored for later use in the liver and muscle 
tissue. Glycogen stores are used to fuel prolonged exertions, such as long- 
distance running, and to provide energy during food shortage. Fats are 
stored under the skin of mammals for insulation and energy reserves. 


Proteins in food are broken down during digestion and the resulting amino 
acids are absorbed. All of the proteins in the body must be formed from 
these amino-acid constituents; no proteins are obtained directly from food. 


Fats add flavor to food and promote a sense of satiety or fullness. Fatty 
foods are also significant sources of energy, and fatty acids are required for 
the construction of lipid membranes. Fats are also required in the diet to aid 
the absorption of fat-soluble vitamins and the production of fat-soluble 
hormones. 


While the animal body can synthesize many of the molecules required for 
function from precursors, there are some nutrients that must be obtained 
from food. These nutrients are termed essential nutrients, meaning they 


must be eaten, because the body cannot produce them. Essential nutrients 
include some fatty acids, some amino acids, vitamins, and minerals. 


Section Summary 


There are many organs that work together to digest food and absorb 
nutrients. The mouth is the point of ingestion and the location where both 
mechanical and chemical breakdown of food begins. Saliva contains an 
enzyme called amylase that breaks down carbohydrates and an enxyme 
lipase that breaks down triglycerides. The food bolus travels through the 
esophagus by peristaltic movements to the stomach. The stomach has an 
extremely acidic environment. The enzyme pepsin digests protein in the 
stomach. Further digestion and absorption take place in the small intestine. 
The large intestine reabsorbs water from the undigested food and stores 
waste until elimination. 


Carbohydrates, proteins, and fats are the primary components of food. 
Some essential nutrients are required for cellular function but cannot be 
produced by the animal body. These include vitamins (both fat and water 
soluble) , minerals, some fatty acids, and some amino acids. Food intake in 
more than necessary amounts is stored as glycogen in the liver and muscle 
cells, and in adipose tissue. Excess adipose storage can lead to obesity and 
serious health problems. 


Art Connections 


Exercise: 
Problem: 


[link] Which of the following statements about the digestive system is 
false? 


a. Chyme is a mixture of food and digestive juices that is produced 
in the stomach. 
b. Food enters the large intestine before the small intestine. 


c. In the small intestine, chyme mixes with bile, which emulsifies 
fats. 

d. The stomach is separated from the small intestine by the pyloric 
sphincter. 


Solution: 


[link] B 


Review Questions 


Exercise: 


Problem: Where does the majority of fat digestion take place? 


a. mouth 

b. stomach 

c. small intestine 
d. large intestine 


Solution: 
C 
Exercise: 
Problem:The bile from the liver is delivered to the 
a. stomach 
b. liver 


c. small intestine 
d. colon 


Solution: 


C 
Exercise: 
Problem: Which of the following statements is not true? 
a. Essential nutrients can be synthesized by the body. 
b. Vitamins are required in small quantities for bodily function. 
c. Some amino acids can be synthesized by the body, while others 


need to be obtained from diet. 
d. Vitamins come in two categories: fat-soluble and water-soluble. 


Solution: 


A 


Free Response 


Exercise: 


Problem: What is the role of the accessory organs in digestion? 


Solution: 


Accessory organs play an important role in producing and delivering 
digestive juices to the intestine during digestion and absorption. 
Specifically, the salivary glands, liver, pancreas, and gallbladder play 
important roles. Malfunction of any of these organs can lead to disease 
states. 


Glossary 
amylase 


an enzyme found in saliva and secreted by the pancreas that converts 
carbohydrates to maltose 


anus 
the exit point of the digestive system for waste material 


bile 
a digestive juice produced by the liver; important for digestion of 
lipids 


bolus 
a mass of food resulting from chewing action and wetting by saliva 


colon 
the largest portion of the large intestine consisting of the ascending 
colon, transverse colon, and descending colon 


chyme 
a mixture of partially digested food and stomach juices 


esophagus 
a tubular organ that connects the mouth to the stomach 


essential nutrient 
a nutrient that cannot be synthesized by the body; it must be obtained 
from food 


gallbladder 
the organ that stores and concentrates bile 


large intestine 
a digestive system organ that reabsorbs water from undigested material 
and processes waste matter 


liver 
an organ that produces bile for digestion and processes vitamins and 
lipids 


mineral 
an inorganic, elemental molecule that carries out important roles in the 
body 


oral cavity 
the point of entry of food into the digestive system 


pancreas 
a gland that secretes digestive juices 


pepsin 
an enzyme found in the stomach whose main role is protein digestion 


peristalsis 
wave-like movements of muscle tissue 


rectum 
the area of the body where feces is stored until elimination 


salivary gland 
one of three pairs of exocrine glands in the mammalian mouth that 
secretes saliva, a mix of watery mucus and enzymes 


small intestine 
the organ where digestion of protein, fats, and carbohydrates is 
completed 


stomach 
a saclike organ containing acidic digestive juices 


vitamin 
an organic substance necessary in small amounts to sustain life 


Introduction to Metabolism 
class="introduction" 


A 
hummingbir 
d needs 
energy to 
maintain 
prolonged 
flight. The 
bird obtains 
its energy 
from taking 
in food and 
transforming 
the energy 
contained in 
food 
molecules 
into forms of 
energy to 
power its 
flight 
through a 
series of 
biochemical 
reactions. 
(credit: 
modification 
of work by 
Cory 
Zanker) 


Virtually every task performed by living organisms requires energy. Energy 
is needed to perform heavy labor and exercise, but humans also use energy 
while thinking, and even during sleep. In fact, the living cells of every 
organism constantly use energy. Nutrients and other molecules are imported 
into the cell, metabolized (broken down) and possibly synthesized into new 
molecules, modified if needed, transported around the cell, and possibly 
distributed to the entire organism. For example, the large proteins that make 
up muscles are built from smaller molecules imported from dietary amino 
acids. Complex carbohydrates are broken down into simple sugars that the 
cell uses for energy. Just as energy is required to both build and demolish a 
building, energy is required for the synthesis and breakdown of molecules 
as well as the transport of molecules into and out of cells. In addition, 
processes such as ingesting and breaking down pathogenic bacteria and 
viruses, exporting wastes and toxins, and movement of the cell require 
energy. From where, and in what form, does this energy come? How do 
living cells obtain energy, and how do they use it? This chapter will discuss 
different forms of energy and the physical laws that govern energy transfer. 
This chapter will also describe how cells use energy and replenish it, and 
how chemical reactions in the cell are performed with great efficiency. 


Energy and Metabolism 
By the end of this section, you will be able to: 


e Explain what metabolic pathways are 

e State the first and second laws of thermodynamics 

e Explain the difference between kinetic and potential energy 
e Describe endergonic and exergonic reactions 

e Discuss how enzymes function as molecular catalysts 


Metabolic Pathways 


Cellular processes such as the building and breaking down of complex 
molecules occur through stepwise chemical reactions. Some of these 
chemical reactions are spontaneous and release energy, whereas others 
require energy to proceed. Just as living things must continually consume 
food to replenish their energy supplies, cells must continually produce more 
energy to replenish that used by the many energy-requiring chemical 
reactions that constantly take place. Together, all of the chemical reactions 
that take place inside cells, including those that consume or generate 
energy, are referred to as the cell’s metabolism. Consider the metabolism of 
sugar. This is a classic example of one of the many cellular processes that 
use and produce energy. Living things consume sugars as a major energy 
source, because sugar molecules have a great deal of energy stored within 
their bonds. For the most part, photosynthesizing organisms like plants 
produce these sugars. During photosynthesis, plants use energy (originally 
from sunlight) to convert carbon dioxide gas (CO>) into sugar molecules 
(like glucose: CgH; 0¢). They consume carbon dioxide and produce 
oxygen as a waste product. This reaction is summarized as: 

Equation: 


6CO, + 6H2O --> CgH}20¢ + 602 


Because this process involves synthesizing an energy-storing molecule, it 
requires energy input to proceed. During the light reactions of 
photosynthesis, energy is provided by a molecule called adenosine 
triphosphate (ATP), which is the primary energy currency of all cells. Just 


as the dollar is used as currency to buy goods, cells use molecules of ATP 
as energy currency to perform immediate work. In contrast, energy-storage 
molecules such as glucose are consumed only to be broken down to use 
their energy. The reaction that harvests the energy of a sugar molecule in 
cells requiring oxygen to survive can be summarized by the reverse reaction 
to photosynthesis. In this reaction, oxygen is consumed and carbon dioxide 
is released as a waste product. The reaction is summarized as: 

Equation: 


C.gH120¢ + 60, --> 6H,O + 6CO, 


Both of these reactions involve many steps. 


The processes of making and breaking down sugar molecules illustrate two 
examples of metabolic pathways. A metabolic pathway is a series of 
chemical reactions that takes a starting molecule and modifies it, step-by- 
step, through a series of metabolic intermediates, eventually yielding a final 
product. In the example of sugar metabolism, the first metabolic pathway 
synthesized sugar from smaller molecules, and the other pathway broke 
sugar down into smaller molecules. These two opposite processes—the first 
requiring energy and the second producing energy—are referred to as 
anabolic pathways (building polymers) and catabolic pathways (breaking 
down polymers into their monomers), respectively. Consequently, 
metabolism is composed of synthesis (anabolism) and degradation 
(catabolism) ({link]). 


It is important to know that the chemical reactions of metabolic pathways 
do not take place on their own. Each reaction step is facilitated, or 
catalyzed, by a protein called an enzyme. Enzymes are important for 
catalyzing all types of biological reactions—those that require energy as 
well as those that release energy. 


Metabolic pathways 


Anabolic: Small molecules are built into large ones. Energy is required. 


oeeo : = 0000 


Catabolic: Large molecules are broken down into small ones. Energy is released. 


©0002 — © © © O 


Catabolic pathways are those that generate energy by breaking 
down larger molecules. Anabolic pathways are those that 
require energy to synthesize larger molecules. Both types of 
pathways are required for maintaining the cell’s energy 
balance. 


Energy 


Thermodynamics refers to the study of energy and energy transfer 
involving physical matter. The matter relevant to a particular case of energy 
transfer is called a system, and everything outside of that matter is called 
the surroundings. For instance, when heating a pot of water on the stove, 
the system includes the stove, the pot, and the water. Energy is transferred 
within the system (between the stove, pot, and water). There are two types 
of systems: open and closed. In an open system, energy can be exchanged 
with its surroundings. The stovetop system is open because heat can be lost 
to the air. A closed system cannot exchange energy with its surroundings. 


Biological organisms are open systems. Energy is exchanged between them 
and their surroundings as they use energy from the sun to perform 
photosynthesis or consume energy-storing molecules and release energy to 
the environment by doing work and releasing heat. Like all things in the 
physical world, energy is subject to physical laws. The laws of 
thermodynamics govern the transfer of energy in and among all systems in 
the universe. 


In general, energy is defined as the ability to do work, or to create some 
kind of change. Energy exists in different forms. For example, electrical 
energy, light energy, and heat energy are all different types of energy. To 
appreciate the way energy flows into and out of biological systems, it is 
important to understand two of the physical laws that govern energy. 


Thermodynamics 


The first law of thermodynamics states that the total amount of energy in 
the universe is constant and conserved. In other words, there has always 
been, and always will be, exactly the same amount of energy in the 
universe. Energy exists in many different forms. According to the first law 
of thermodynamics, energy may be transferred from place to place or 
transformed into different forms, but it cannot be created or destroyed. The 
transfers and transformations of energy take place around us all the time. 
Light bulbs transform electrical energy into light and heat energy. Gas 
stoves transform chemical energy from natural gas into heat energy. Plants 
perform one of the most biologically useful energy transformations on 
earth: that of converting the energy of sunlight to chemical energy stored 
within organic molecules. Some examples of energy transformations are 
shown in [link]. 


The challenge for all living organisms is to obtain energy from their 
surroundings in forms that they can transfer or transform into usable energy 
to do work. Living cells have evolved to meet this challenge. Chemical 
energy stored within organic molecules such as sugars and fats is 
transferred and transformed through a series of cellular chemical reactions 
into energy within molecules of ATP. Energy in ATP molecules is easily 
accessible to do work. Examples of the types of work that cells need to do 
include building complex molecules, transporting materials, powering the 
motion of cilia or flagella, and contracting muscle fibers to create 
movement. 


Chemical energy Light energy 


> > 


Kinetic energy Chemical energy 


* 


Shown are some examples of energy 
transferred and transformed from one 
system to another and from one form to 
another. The food we consume provides our 
cells with the energy required to carry out 
bodily functions, just as light energy 
provides plants with the means to create the 
chemical energy they need. (credit "ice 
cream": modification of work by D. Sharon 
Pruitt; credit "kids": modification of work 
by Max from Providence; credit "leaf": 
modification of work by Cory Zanker) 


A living cell’s primary tasks of obtaining, transforming, and using energy to 
do work may seem simple. However, the second law of thermodynamics 
explains why these tasks are harder than they appear. The second law of 
thermodynamics says that energy will always be lost as heat in energy 
transfers or transformations. All energy transfers and transformations are 
never completely efficient. In every energy transfer, some amount of energy 
is lost in a form that is unusable. In most cases, this form is heat energy. 
Thermodynamically, heat energy is defined as the energy transferred from 
one system to another that is not work. For example, when a light bulb is 
turned on, some of the energy being converted from electrical energy into 
light energy is lost as heat energy. Likewise, some energy is lost as heat 
energy during cellular metabolic reactions. 


Potential and Kinetic Energy 


When an object is in motion, there is energy associated with that object. 
Think of a wrecking ball. Even a slow-moving wrecking ball can do a great 
deal of damage to other objects. Energy associated with objects in motion is 
called kinetic energy ((link]). A speeding bullet, a walking person, and the 
rapid movement of molecules in the air (which produces heat) all have 
kinetic energy. 


Now what if that same motionless wrecking ball is lifted two stories above 
ground with a crane? If the suspended wrecking ball is unmoving, is there 
energy associated with it? The answer is yes. The energy that was required 
to lift the wrecking ball did not disappear, but is now stored in the wrecking 
ball by virtue of its position and the force of gravity acting on it. This type 
of energy is called potential energy ((link]). If the ball were to fall, the 
potential energy would be transformed into kinetic energy until all of the 
potential energy was exhausted when the ball rested on the ground. 
Wrecking balls also swing like a pendulum; through the swing, there is a 
constant change of potential energy (highest at the top of the swing) to 
kinetic energy (highest at the bottom of the swing). Other examples of 
potential energy include the energy of water held behind a dam or a person 
about to skydive out of an airplane. 


Still water has potential energy; moving water, such as in 
a waterfall or a rapidly flowing river, has kinetic energy. 
(credit "dam": modification of work by "Pascal"/Flickr; 
credit "waterfall": modification of work by Frank 
Gualtieri) 


Potential energy is not only associated with the location of matter, but also 
with the structure of matter. Even a spring on the ground has potential 
energy if it is compressed; so does a rubber band that is pulled taut. On a 
molecular level, the bonds that hold the atoms of molecules together exist in 
a particular structure that has potential energy. Remember that anabolic 
cellular pathways require energy to synthesize complex molecules from 
simpler ones and catabolic pathways release energy when complex 
molecules are broken down. The fact that energy can be released by the 
breakdown of certain chemical bonds implies that those bonds have 
potential energy. In fact, there is potential energy stored within the bonds of 
all the food molecules we eat, which is eventually harnessed for use. This is 
because these bonds can release energy when broken. The type of potential 
energy that exists within chemical bonds, and is released when those bonds 
are broken, is called chemical energy. Chemical energy is responsible for 
providing living cells with energy from food. The release of energy occurs 
when the molecular bonds within food molecules are broken. 


Free and Activation Energy 


After learning that chemical reactions release energy when energy-storing 
bonds are broken, an important next question is the following: How is the 
energy associated with these chemical reactions quantified and expressed? 
How can the energy released from one reaction be compared to that of 
another reaction? A measurement of free energy is used to quantify these 
energy transfers. Recall that according to the second law of 
thermodynamics, all energy transfers involve the loss of some amount of 
energy in an unusable form such as heat. Free energy specifically refers to 
the energy associated with a chemical reaction that is available after the 
losses are accounted for. In other words, free energy is usable energy, or 
energy that is available to do work. 


If energy is released during a chemical reaction, then the change in free 
energy, signified as AG (delta G) will be a negative number. A negative 
change in free energy also means that the products of the reaction have less 
free energy than the reactants, because they release some free energy during 
the reaction. Reactions that have a negative change in free energy and 
consequently release free energy are called exergonic reactions. Think: 
exergonic means energy is exiting the system. These reactions are also 
referred to as spontaneous reactions, and their products have less stored 
energy than the reactants. An important distinction must be drawn between 
the term spontaneous and the idea of a chemical reaction occurring 
immediately. Contrary to the everyday use of the term, a spontaneous 
reaction is not one that suddenly or quickly occurs. The rusting of iron is an 
example of a spontaneous reaction that occurs slowly, little by little, over 
time. 


If a chemical reaction absorbs energy rather than releases energy on 
balance, then the AG for that reaction will be a positive value. In this case, 
the products have more free energy than the reactants. Thus, the products of 
these reactions can be thought of as energy-storing molecules. These 
chemical reactions are called endergonic reactions and they are non- 
spontaneous. An endergonic reaction will not take place on its own without 
the addition of free energy. 


There is another important concept that must be considered regarding 
endergonic and exergonic reactions. Exergonic reactions require a small 


amount of energy input to get going, before they can proceed with their 
energy-releasing steps. These reactions have a net release of energy, but still 
require some energy input in the beginning. This small amount of energy 
input necessary for all chemical reactions to occur is called the activation 
energy. 


Enzymes 


A substance that helps a chemical reaction to occur is called a catalyst, and 
the molecules that catalyze biochemical reactions are called enzymes. Most 
enzymes are proteins and perform the critical task of lowering the activation 
energies of chemical reactions inside the cell. Most of the reactions critical 
to a living cell happen too slowly at normal temperatures to be of any use to 
the cell. Without enzymes to speed up these reactions, life could not persist. 
Enzymes do this by binding to the reactant molecules and holding them in 
such a way as to make the chemical bond-breaking and -forming processes 
take place more easily. It is important to remember that enzymes do not 
change whether a reaction is exergonic (spontaneous) or endergonic. This is 
because they do not change the free energy of the reactants or products. 
They only reduce the activation energy required for the reaction to go 
forward ([link]). In addition, an enzyme itself is unchanged by the reaction 
it catalyzes. Once one reaction has been catalyzed, the enzyme is able to 
participate in other reactions. 


Activation 
energy 


reactants 


Reaction path 


Enzymes lower the activation energy 
of the reaction but do not change the 
free energy of the reaction. 


The chemical reactants to which an enzyme binds are called the enzyme’s 
substrates. There may be one or more substrates, depending on the 
particular chemical reaction. In some reactions, a single reactant substrate is 
broken down into multiple products. In others, two substrates may come 
together to create one larger molecule. Two reactants might also enter a 
reaction and both become modified, but they leave the reaction as two 
products. The location within the enzyme where the substrate binds is 
called the enzyme’s active site. The active site is where the “action” 
happens. Since enzymes are proteins, there is a unique combination of 
amino acid side chains within the active site. Each side chain is 
characterized by different properties. They can be large or small, weakly 
acidic or basic, hydrophilic or hydrophobic, positively or negatively 
charged, or neutral. The unique combination of side chains creates a very 
specific chemical environment within the active site. This specific 
environment is suited to bind to one specific chemical substrate (or 
substrates). 


Active sites are subject to influences of the local environment. Increasing 
the environmental temperature generally increases reaction rates, enzyme- 
catalyzed or otherwise. However, temperatures outside of an optimal range 
reduce the rate at which an enzyme catalyzes a reaction. Hot temperatures 
will eventually cause enzymes to denature, an irreversible change in the 
three-dimensional shape and therefore the function of the enzyme. Enzymes 
are also suited to function best within a certain pH and salt concentration 
range, and, as with temperature, extreme pH, and salt concentrations can 
cause enzymes to denature. 


Enzyme changes shape Products 
Substrate slightly as substrate binds 


[ ra site 5 / 


Substrate entering Enzyme/substrate Enzyme/product Products leaving 
the active site of complex complex the active site of 
the enzyme the enzyme 


In this diagram, a substrate binds the active site of 
an enzyme and, in the process, both the shape of 
the enzyme and the shape of the substrate change. 
The substrate is converted to product, which leaves 
the active site. 


Enzymes can also be regulated in ways that either promote or reduce 
enzyme activity. There are many kinds of molecules that inhibit or promote 
enzyme function, and various mechanisms by which they do so. In some 
cases of enzyme inhibition, an inhibitor molecule is similar enough to a 
substrate that it can bind to the active site and simply block the substrate 
from binding. When this happens, the enzyme is inhibited through 
competitive inhibition, because an inhibitor molecule competes with the 
substrate for binding to the active site. 


Section Summary 


Cells perform the functions of life through various chemical reactions. A 
cell’s metabolism refers to the combination of chemical reactions that take 
place within it. Catabolic reactions break down complex chemicals into 
simpler ones and are associated with energy release. Anabolic processes 
build complex molecules out of simpler ones and require energy. 


In studying energy, the term system refers to the matter and environment 
involved in energy transfers. Entropy is a measure of the disorder of a 
system. The physical laws that describe the transfer of energy are the laws 
of thermodynamics. The first law states that the total amount of energy in 
the universe is constant. The second law of thermodynamics states that 
every energy transfer involves some loss of energy in an unusable form, 
such as heat energy. Energy comes in different forms: kinetic, potential, and 
free. The change in free energy of a reaction can be negative (releases 
energy, exergonic) or positive (consumes energy, endergonic). All reactions 
require an initial input of energy to proceed, called the activation energy. 


Enzymes are chemical catalysts that speed up chemical reactions by 
lowering their activation energy. Enzymes have an active site with a unique 
chemical environment that fits particular chemical reactants for that 
enzyme, called substrates. Enzyme action is regulated to conserve resources 
and respond optimally to the environment. 


Review Questions 


Exercise: 


Problem: 
Which of the following is not an example of an energy transformation? 


a. Heating up dinner in a microwave 
b. Solar panels at work 

c. Formation of static electricity 

d. None of the above 


Solution: 


D 


Exercise: 


Problem: Which of the following is not true about enzymes? 


a. They are consumed by the reactions they catalyze. 

b. They are usually made of amino acids. 

c. They lower the activation energy of chemical reactions. 

d. Each one is specific to the particular substrate(s) to which it 
binds. 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


Does physical exercise to increase muscle mass involve anabolic 
and/or catabolic processes? Give evidence for your answer. 


Solution: 


Physical exercise involves both anabolic and catabolic processes. Body 
cells break down sugars to provide ATP to do the work necessary for 
exercise, such as muscle contractions. This is catabolism. Muscle cells 
also must repair muscle tissue damaged by exercise by building new 
muscle. This is anabolism. 


Glossary 


activation energy 
the amount of initial energy necessary for reactions to occur 


active site 
a specific region on the enzyme where the substrate binds 


allosteric inhibition 
the mechanism for inhibiting enzyme action in which a regulatory 
molecule binds to a second site (not the active site) and initiates a 
conformation change in the active site, preventing binding with the 
substrate 


anabolic 
describes the pathway that requires a net energy input to synthesize 
complex molecules from simpler ones 


bioenergetics 
the concept of energy flow through living systems 


catabolic 
describes the pathway in which complex molecules are broken down 
into simpler ones, yielding energy as an additional product of the 
reaction 


competitive inhibition 
a general mechanism of enzyme activity regulation in which a 
molecule other than the enzyme’s substrate is able to bind the active 
site and prevent the substrate itself from binding, thus inhibiting the 
overall rate of reaction for the enzyme 


endergonic 
describes a chemical reaction that results in products that store more 
chemical potential energy than the reactants 


enzyme 
a molecule that catalyzes a biochemical reaction 


exergonic 
describes a chemical reaction that results in products with less 
chemical potential energy than the reactants, plus the release of free 
energy 


feedback inhibition 
a mechanism of enzyme activity regulation in which the product of a 
reaction or the final product of a series of sequential reactions inhibits 
an enzyme for an earlier step in the reaction series 


heat energy 
the energy transferred from one system to another that is not work 


kinetic energy 
the type of energy associated with objects in motion 


metabolism 
all the chemical reactions that take place inside cells, including those 
that use energy and those that release energy 


noncompetitive inhibition 
a general mechanism of enzyme activity regulation in which a 
regulatory molecule binds to a site other than the active site and 
prevents the active site from binding the substrate; thus, the inhibitor 
molecule does not compete with the substrate for the active site; 
allosteric inhibition is a form of noncompetitive inhibition 


potential energy 
the type of energy that refers to the potential to do work 


substrate 
a molecule on which the enzyme acts 


thermodynamics 
the science of the relationships between heat, energy, and work 


Glycolysis 
By the end of this section, you will be able to: 


e Explain how ATP is used by the cell as an energy source 
e Describe the overall result in terms of molecules produced of the 
breakdown of glucose by glycolysis 


Even exergonic, energy-releasing reactions require a small amount of 
activation energy to proceed. However, consider endergonic reactions, 
which require much more energy input because their products have more 
free energy than their reactants. Within the cell, where does energy to power 
such reactions come from? The answer lies with an energy-supplying 
molecule called adenosine triphosphate, or ATP. ATP is a small, relatively 
simple molecule, but within its bonds contains the potential for a quick 
burst of energy that can be harnessed to perform cellular work. This 
molecule can be thought of as the primary energy currency of cells in the 
same way that money is the currency that people exchange for things they 
need. ATP is used to power the majority of energy-requiring cellular 
reactions. 


ATP in Living Systems 


A living cell cannot store significant amounts of free energy. Excess free 
energy would result in an increase of heat in the cell, which would denature 
enzymes and other proteins, and thus destroy the cell. Rather, a cell must be 
able to store energy safely and release it for use only as needed. Living cells 
accomplish this using ATP, which can be used to fill any energy need of the 
cell. How? It functions as a rechargeable battery. 


When ATP is broken down, usually by the removal of its terminal 
phosphate group, energy is released. This energy is used to do work by the 
cell, usually by the binding of the released phosphate to another molecule, 
thus activating it. For example, in the mechanical work of muscle 
contraction, ATP supplies energy to move the contractile muscle proteins. 


ATP Structure and Function 


At the heart of ATP is a molecule of adenosine monophosphate (AMP), 
which is composed of an adenine molecule bonded to both a ribose 
molecule and a single phosphate group ([link]). Ribose is a five-carbon 
sugar found in RNA and AMP is one of the nucleotides in RNA. The 
addition of a second phosphate group to this core molecule results in 
adenosine diphosphate (ADP); the addition of a third phosphate group 
forms adenosine triphosphate (ATP). 


Gamma Alpha = 
phosphate phosphate —N 
group group N 
fe) fe) fe) ll x » 
_ ill I| I| N 
F ms i ° ji - O " Adenine 
a: on Oo” 
Beta 
phosphate OH OH 
group 


Ribose 


The structure of ATP shows the basic 
components of a two-ring adenine, five- 
carbon ribose, and three phosphate 
groups. 


The addition of a phosphate group to a molecule requires a high amount of 
energy and results in a high-energy bond. Phosphate groups are negatively 
charged and thus repel one another when they are arranged in series, as they 
are in ADP and ATP. This repulsion makes the ADP and ATP molecules 
inherently unstable. The release of one or two phosphate groups from ATP, 
a process called hydrolysis, releases energy. Hydrolysis occurs when water 
is added to break the chemical bond and is the opposite of dehydration 
synthesis reactions discussed previously. 


Glycolysis 


You have read that nearly all of the energy used by living things comes to 
them in the bonds of the sugar, glucose. Glycolysis is the first step in the 
breakdown of glucose to extract energy for cell metabolism. Many living 
organisms carry out glycolysis as part of their metabolism. Glycolysis takes 
place in the cytoplasm of eukaryotic cells. 


Glycolysis begins with the six-carbon, ring-shaped structure of a single 
glucose molecule and ends with two molecules of a three-carbon sugar 
called pyruvate. Glycolysis consists of two distinct phases. In the first part 
of the glycolysis pathway, energy is used to make adjustments so that the 
six-carbon sugar molecule can be split evenly into two three-carbon 
pyruvate molecules. In the second part of glycolysis, ATP and 
nicotinamide-adenine dinucleotide (NADH) are produced ({link]). NAD+ is 
the form of the coenzyme that is able to accept electrons and hydrogen from 
the glucose. NADH carries the electrons to a later stage in metabolism to be 
used to provide energy (indirectly) to catalyze the endergonic reaction of 
adding a phosphate group to ADP to make ATP. 


If the cell cannot catabolize the pyruvate molecules further, it will harvest 
only two ATP molecules from one molecule of glucose. For example, 
mature mammalian red blood cells are only capable of glycolysis, which is 
their sole source of ATP. If glycolysis is interrupted, these cells would 
eventually die. 


es Glucose 
2 ATP 
2 ADP 


Fructose 
diphosphate 


foo” 
CCCOm—ECe CO 


Glyceraldehyde 3-phosphate Glyceraldehyde 3-phosphate 


NAD* NAD* 
NADH NADH 
2 ADP 2 ADP 
2 ATP 2 ATP 
OOO CCS) 


Pyruvate Pyruvate 


In glycolysis, a glucose 
molecule is converted into two 
pyruvate molecules. Notice that 

each of the two molecules has 
three carbon atoms, 
representing the six carbons that 
were present in the glucose that 
started the process. This means 
that no carbon dioxide is 
released in glycolysis, as the 
carbon to make it comes from 
the glucose molecule. 


Section Summary 


ATP functions as the energy currency for cells. It allows cells to store 
energy briefly and transport it within itself to support endergonic chemical 
reactions. The structure of ATP is that of an RNA nucleotide with three 
phosphate groups attached. As ATP is used for energy, a phosphate group is 
detached, and ADP is produced. Energy derived from glucose catabolism is 
used to recharge ADP into ATP. 


Glycolysis is the first pathway used in the breakdown of glucose to extract 
energy. Because it is used by nearly all organisms on earth, it must have 
evolved early in the history of life. Glycolysis consists of two parts: The 
first part prepares the six-carbon ring of glucose for separation into two 
three-carbon sugars. Energy from ATP is invested into the molecule during 
this step to energize the separation. The second half of glycolysis extracts 
ATP and high-energy electrons from hydrogen atoms and attaches them to 
NAD". Two ATP molecules are invested in the first half and four ATP 
molecules are formed during the second half. This produces a net gain of 
two ATP molecules per molecule of glucose for the cell. 


Multiple Choice 

Exercise: 
Problem: 
Energy is stored long-term in the bonds of and used short-term 
to perform work from a(n) molecule. 


a. ATP : glucose 

b. an anabolic molecule : catabolic molecule 
c. glucose : ATP 

d. a catabolic molecule : anabolic molecule 


Solution: 


G 


Exercise: 


Problem:The energy currency used by cells is 


a. ATP 

b. ADP 

c. AMP 

d. adenosine 


Solution: 


A 
Exercise: 


Problem: 


The glucose that enters the glycolysis pathway is split into two 
molecules of 


a. ATP 

b. phosphate 
c. NADH 

d. pyruvate 


Solution: 


D 


Glossary 


ATP 
(also, adenosine triphosphate) the cell’s energy currency 


glycolysis 
the process of breaking glucose into two three-carbon molecules with 
the production of ATP and NADH 


The Transition Reaction, Citric Acid/Kreb's Cycle and Electron Transport 
Chain/Oxidative Phosphorylation 
By the end of this section, you will be able to: 


e State the location of these reactions in the cell 

e Describe the overall outcome of the transition reaction, citric 
acid/Kreb's cycle and the electron transport chain/oxidative 
phosphorylation in terms of the products of each 

e Describe the relationships of glycolysis, transition reaction, citric 
acid/Kreb's cycle, and electron transport chain/oxidative 
phosphorylation in terms of their inputs and outputs. 


The Transition Reaction and Citric Acid/Kreb's Cycle 


In eukaryotic cells, the pyruvate molecules produced at the end of 
glycolysis are transported into mitochondria, which are sites of cellular 
respiration. If oxygen is available, aerobic respiration will go forward. In 
mitochondria, pyruvate will be transformed into a two-carbon acetyl group 
(by removing a molecule of carbon dioxide) that will be picked up by a 
carrier compound called coenzyme A (CoA), which is made from vitamin 
B. The resulting compound is called acetyl CoA. ((link]). This set of 
reactions is referred to as the transition reaction, as it happens during 
pyruvate transport into the mitochondria. The major function of acetyl CoA 
is to deliver the acetyl group (2 carbon fragment) derived from pyruvate to 
the next pathway in glucose catabolism, which is the citric acid/Kreb's 
cycle. Note that during the transition reaction, each pyruvate/pyruvic acid 
molecule loses one carbon as carbon dioxide and one molecule of NADH is 
produced. Therefore, a total of two molecules of carbon dioxide and two 
molecules of NADH are produced per glucose that started glycolysis. 


@.., 
eos 
7, y, 


Pyruvic acid Acetyl CoA 
NAD* NADH 


Citric 
acid 
cycle 


During the transition reaction, pyruvate is 
converted into acetyl-CoA before entering the 
citric acid/Kreb's cycle. 


Like the conversion of pyruvate to acetyl CoA, the citric acid cycle (also 
called the Kreb's cycle) in eukaryotic cells takes place in the matrix of the 
mitochondria. Unlike glycolysis, the citric acid cycle is a closed loop: The 
last part of the pathway regenerates the compound used in the first step. The 
eight steps of the cycle are a series of chemical reactions that produces two 
carbon dioxide molecules, one ATP molecule (or an equivalent), and 
reduced forms (NADH and FADH>) of NAD* and FAD", important 
coenzymes in the cell. Part of this is considered an aerobic pathway 
(oxygen-requiring) because the NADH and FADH) produced must transfer 
their electrons to the next pathway in the system, which will use oxygen. If 
oxygen is not present, this transfer does not occur. Note that per glucose 
that started glycolysis, processing of the two pyruvate/pyruvic acid 
molecules in the citric acid cycle will result in the production of a total of 
six NADH, two FADHb, and two ATP. Also note that at this point, a total of 
six molecules of carbon dioxide have been released, which accounts for the 
six carbons in the starting glucose molecule. The high-energy NADH and 
FADH) will be used in the last stage of aerobic respiration to produce 
additional ATP molecules. 


Electron Transport Chain/Oxidative Phosphorylation 


You have just read about two pathways in glucose catabolism—glycolysis 
and the citric acid cycle—that generate ATP. Most of the ATP generated 
during the aerobic catabolism of glucose, however, is not generated directly 
from these pathways. Rather, it derives from a process that begins with 
passing electrons through a series of chemical reactions to a final electron 
acceptor, oxygen. These reactions take place in specialized protein 
complexes located in the inner membrane of the mitochondria. The energy 
of the electrons is harvested and used to generate a electrochemical gradient 
of hydrogen ions across the inner mitochondrial membrane. The potential 
energy of this gradient is used to generate ATP by providing the energy to 
add phosphate groups to ADP molecules. The entirety of this process is 
called oxidative phosphorylation, as oxygen is required as the terminal 
electron acceptor and phosphate groups are added to ADP molecules. 


The electron transport chain ([link]a) is the last component of aerobic 
respiration and is the only part of metabolism that uses atmospheric oxygen. 
Oxygen continuously diffuses into plants for this purpose. In animals, 
oxygen enters the body through the respiratory system. Electron transport is 
a series of chemical reactions that resembles a bucket brigade in that 
electrons are passed rapidly from one component to the next, to the 
endpoint of the chain where oxygen is the final electron acceptor and water 
is produced. There are four complexes composed of proteins, labeled I 
through IV in [link]c, and the aggregation of these four complexes, together 
with associated mobile, accessory electron carriers, is called the electron 
transport chain. The electron transport chain is present in multiple copies 
in the inner mitochondrial membrane of eukaryotes and in the plasma 
membrane of prokaryotes. In each transfer of an electron through the 
electron transport chain, the electron loses energy, but with some transfers, 
the energy is stored as potential energy by using it to pump hydrogen ions 
across the inner mitochondrial membrane into the intermembrane space, 
creating an electrochemical gradient. 


Note: 
Art Connection 


(a) (b) 


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space 


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matrix 


Inner mitochondrial 
membrane 


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4 
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Citric 


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Matrix Ne 


(a) The electron transport chain is a set of molecules that supports a 
series of oxidation-reduction reactions. (b) ATP synthase is a 
complex, molecular machine that uses an H® gradient to regenerate 
ATP from ADP. (c) An overview of the entire process. 


MUN 


Electrons from NADH and FADH) are passed to protein complexes in the 
electron transport chain. As they are passed from one complex to another 
(there are a total of four), the electrons lose energy, and some of that energy 
is used to pump hydrogen ions from the mitochondrial matrix into the 
intermembrane space. In the fourth protein complex, the electrons are 
accepted by oxygen, the terminal acceptor. The oxygen with its extra 
electrons then combines with two hydrogen ions, further enhancing the 
electrochemical gradient, to form water. If there were no oxygen present in 
the mitochondrion, the electrons could not be removed from the system, and 
the entire electron transport chain would back up and stop. The 
mitochondria would be unable to generate new ATP in this way, and the cell 
would ultimately die from lack of energy. This is the reason we must 
breathe to draw in new oxygen. 


In the electron transport chain, the free energy from the series of reactions 
just described is used to pump hydrogen ions (via active transport) across 
the membrane. The uneven distribution of H* ions across the membrane 
establishes an electrochemical gradient, owing to the H* ions’ positive 
charge and their higher concentration on one side of the membrane. 


Hydrogen ions diffuse through the inner membrane through a membrane 
protein called ATP synthase ((link]b). This complex protein acts as a tiny 
generator, turned by the force of the hydrogen ions diffusing through it, 
down their electrochemical gradient from the intermembrane space, where 
there are many mutually repelling hydrogen ions to the matrix, where there 
are few. The turning of the parts of this molecular machine regenerate ATP 
from ADP and phosphate. 


Chemiosmosis (({link]c) is used to generate 90 percent of the ATP made 
during aerobic glucose catabolism. The result of the reactions is the 
production of ATP from the energy of the electrons removed from hydrogen 
atoms. These atoms were originally part of a glucose molecule. At the end 
of the electron transport system, the electrons are used to reduce an oxygen 
molecule to oxygen ions. The extra electrons on the oxygen ions attract 
hydrogen ions (protons) from the surrounding medium, and water is 
formed. 


ATP Yield 


The number of ATP molecules generated from the catabolism of glucose 
varies. In general, processing of each NADH yields approximately 3 ATP 
and each FADH) yields approximately 2 ATP. Overall, a total of 10 NADH 
and 2 FADH)> were produced in glycolysis, transition reaction, and the citric 
acid cycle per glucose molecule. This results in the production of 
approximately 34 ATP. Remember, that two additional ATP were produced 
directly in both glycolysis and the citric acid cycle, resulting in a total yield 
of 38 ATP per glucose. This represents an efficiency of approximately 35%, 
with the remaining energy potential lost as heat or other products. 


Note: 

Careers in Action 

Mitochondrial Disease Physician 

What happens when the critical reactions of cellular respiration do not 
proceed correctly? Mitochondrial diseases are genetic disorders of 
metabolism. Mitochondrial disorders can arise from mutations in nuclear 
or mitochondrial DNA, and they result in the production of less energy 
than is normal in body cells. Symptoms of mitochondrial diseases can 
include muscle weakness, lack of coordination, stroke-like episodes, and 
loss of vision and hearing. Most affected people are diagnosed in 
childhood, although there are some adult-onset diseases. Identifying and 
treating mitochondrial disorders is a specialized medical field. The 
educational preparation for this profession requires a college education, 
followed by medical school with a specialization in medical genetics. 
Medical geneticists can be board certified by the American Board of 
Medical Genetics and go on to become associated with professional 
organizations devoted to the study of mitochondrial disease, such as the 
Mitochondrial Medicine Society and the Society for Inherited Metabolic 
Disease. 


Section Summary 


The citric acid cycle is a series of chemical reactions that removes high- 
energy electrons and uses them in the electron transport chain to generate 
ATP. One molecule of ATP (or an equivalent) is produced per each turn of 
the cycle. 


The electron transport chain is the portion of aerobic respiration that uses 
free oxygen as the final electron acceptor for electrons removed from the 
intermediate compounds in glucose catabolism. The electrons are passed 
through a series of chemical reactions, with a small amount of free energy 
used at three points to transport hydrogen ions across the membrane. This 
contributes to the gradient used in chemiosmosis. As the electrons are 
passed from NADH or FADH> down the electron transport chain, they lose 
energy. The products of the electron transport chain are water and ATP. A 
number of intermediate compounds can be diverted into the anabolism of 
other biochemical molecules, such as nucleic acids, non-essential amino 
acids, sugars, and lipids. These same molecules, except nucleic acids, can 
serve as energy sources for the glucose pathway. 


Multiple Choice 


Exercise: 


Problem:What do the electrons added to NAD* do? 


a. They become part of a fermentation pathway. 

b. They go to another pathway for ATP production. 

c. They energize the entry of the acetyl group into the citric acid 
cycle. 

d. They are converted into NADP. 


Solution: 


B 


Exercise: 


Problem: What provides the energy for ATP synthase? 


a. the movement of electrons 

b. the movement of hydrogen atoms 
c. the movement of hydrogen ions 
d. the movement of glucose 

e. the movement of carbon dioxide 


Solution: 


C 


Free Response 


Exercise: 
Problem: 


We inhale oxygen when we breathe and exhale carbon dioxide. What 
is the oxygen used for and where does the carbon dioxide come from? 


Solution: 


The oxygen we inhale is the final electron acceptor in the electron 
transport chain and allows aerobic respiration to proceed, which is the 
most efficient pathway for harvesting energy in the form of ATP from 
food molecules. The carbon dioxide we breathe out is formed during 
the transition reaction and the citric acid cycle when the bonds in 
carbon compounds are broken. 


Glossary 


acetyl CoA 


the combination of an acetyl group derived from pyruvic acid and 
coenzyme A which is made from pantothenic acid (a B-group vitamin) 


ATP synthase 
a membrane-embedded protein complex that regenerates ATP from 
ADP with energy from protons diffusing through it 


chemiosmosis 
the movement of hydrogen ions down their electrochemical gradient 
across a membrane through ATP synthase to generate ATP 


citric acid cycle 
a series of enzyme-catalyzed chemical reactions of central importance 
in all living cells that harvests the energy in carbon-carbon bonds of 
sugar molecules to generate ATP; the citric acid cycle is an aerobic 
metabolic pathway because it requires oxygen in later reactions to 
proceed 


electron transport chain 
a series of four large, multi-protein complexes embedded in the inner 
mitochondrial membrane that accepts electrons from donor compounds 
and harvests energy from a series of chemical reactions to generate a 
hydrogen ion gradient across the membrane 


oxidative phosphorylation 
the production of ATP by the transfer of electrons down the electron 
transport chain to create a proton gradient that is used by ATP synthase 
to add phosphate groups to ADP molecules 


Fermentation 
By the end of this section, you will be able to: 


e Discuss the fundamental process of fermentation in human and and 
yeast cells, including the final products of fermentation 


In aerobic respiration, the final electron acceptor is an oxygen molecule, O>. 
If aerobic respiration occurs, then ATP will be produced using the energy of 
the high-energy electrons carried by NADH or FADH+s to the electron 
transport chain. If aerobic respiration does not occur, NADH must be 
reoxidized to NAD* for reuse as an electron carrier for glycolysis to 
continue. How is this done? Humans use an organic molecule 
(pyruvate/pyruvic acid)as the final electron acceptor. Processes that use an 
organic molecule to regenerate NAD* from NADH are collectively referred 
to as fermentation. 


Lactic Acid Fermentation 


The fermentation method used by animals and some bacteria like those in 
yogurt is lactic acid fermentation ({link]). This occurs routinely in 
mammalian red blood cells and in skeletal muscle that has insufficient 
oxygen supply to allow aerobic respiration to continue (that is, in muscles 
used to the point of fatigue). In muscles, lactic acid produced by 
fermentation must be removed by the blood circulation and brought to the 
liver for further metabolism. The chemical reaction of lactic acid 
fermentation is the following: 

Equation: 


Pyruvic acid + NADH + lactic acid + NAD* 


Note: 
Art Connection 


Lactic Acid Fermentation 


2 Pyruvate 


2 Lactate 


: 
E 
i 


Lactic acid fermentation is common in muscles 
that have become exhausted by use. 


Alcohol Fermentation 


Another familiar fermentation process is alcohol fermentation ([Link]), 
which produces ethanol, an alcohol. The alcohol fermentation reaction is 
the following: 


Pyruvic acid ———_—» CO, + Acetaldehyde 


Acetaldehyde Ethanol 


NADH NAD* 


The reaction resulting in alcohol 
fermentation is shown. 


In the first reaction, a carboxyl group is removed from pyruvic acid, 
releasing carbon dioxide as a gas. The loss of carbon dioxide reduces the 
molecule by one carbon atom, making acetaldehyde. The second reaction 
removes an electron from NADH, forming NAD* and producing ethanol 
from the acetaldehyde, which accepts the electron. The fermentation of 
pyruvic acid by yeast produces the ethanol found in alcoholic beverages 
({link]). If the carbon dioxide produced by the reaction is not vented from 
the fermentation chamber, for example in beer and sparkling wines, it 
remains dissolved in the medium until the pressure is released. Ethanol 
above 12 percent is toxic to yeast, so natural levels of alcohol in wine occur 
at a maximum of 12 percent. 


Fermentation of grape juice to 
make wine produces CO> as a 
byproduct. Fermentation tanks 
have valves so that pressure 
inside the tanks can be released. 


Section Summary 


If NADH cannot be metabolized through aerobic respiration, another 
electron acceptor is used. Most organisms will use some form of 
fermentation to accomplish the regeneration of NAD”, ensuring the 
continuation of glycolysis. The regeneration of NAD" in fermentation is not 
accompanied by ATP production; therefore, the potential for NADH to 
produce ATP using an electron transport chain is not utilized. 


Review Questions 


Exercise: 


Problem: 


Which of the following fermentation methods can occur in animal 
skeletal muscles deprived of oxygen? 


a. lactic acid fermentation 
b. alcohol fermentation 

c. mixed acid fermentation 
d. propionic fermentation 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


When muscle cells run out of oxygen, what happens to the potential 
for energy extraction from sugars and what pathways do the cell use? 


Solution: 


Without oxygen, the transition, the citric acid cycle, and the electron 
transport chain stop, so ATP is no longer generated through this 
mechanism, which extracts the greatest amount of energy from a sugar 
molecule. In addition, NADH accumulates, preventing glycolysis from 
going forward because of an absence of NAD”. Lactic acid 
fermentation uses the electrons in NADH to generate lactic acid from 
pyruvate, which allows glycolysis to continue and thus a smaller 
amount of ATP can be generated by the cell (2 versus 38 ATP per 
glucose). 


Glossary 


anaerobic cellular respiration 
the use of an electron acceptor other than oxygen to complete 
metabolism using electron transport-based chemiosmosis 


fermentation 
the steps that follow the partial oxidation of glucose via glycolysis to 
regenerate NAD"; occurs in the absence of oxygen and uses an organic 
compound as the final electron acceptor 


Introduction to the Cardiovascular System - Blood 
class="introduction" 
Blood Cells 


A single 
drop of 
blood 
contains 
millions of 
red blood 
cells, white 
blood cells, 
and 
platelets. 
One of each 
type is 
shown here 
(from left 
to right) 
isolated 
from a 
scanning 
electron 
micrograph 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


Identify the primary functions of blood, its fluid and cellular 
components, and its physical characteristics 

Identify the most important proteins and other solutes present in blood 
plasma 

Describe the formation of the formed element components of blood 
Discuss the structure and function of red blood cells and hemoglobin 
Explain the significance of AB and Rh blood groups in blood 
transfusions 

Discuss a variety of blood disorders 


The human body needs blood to deliver nutrients to and remove wastes 
from our trillions of cells. The heart pumps blood throughout the body in a 
network of blood vessels. Together, these three components—blood, heart, 
and vessels—makes up the cardiovascular system. This chapter focuses on 
the medium of transport: blood. 


An Overview of Blood 
By the end of this section, you will be able to: 


e Identify the primary functions of blood in transportation, defense, and 
maintenance of homeostasis 

e Name the fluid component of blood and the three major types of 
formed elements, and identify their relative proportions in a blood 
sample 

e Discuss the unique physical characteristics of blood 

e Identify the composition of blood plasma, including its most important 
solutes and plasma proteins 


Blood is a connective tissue. Like all connective tissues, it is made up of 
cellular elements and an extracellular matrix. The cellular elements— 
referred to as the formed elements— include red blood cells (RBCs), 
white blood cells (WBCs), and cell fragments called platelets. The 
extracellular matrix, called plasma, makes blood unique among connective 
tissues because it is fluid. This fluid, which is mostly water, perpetually 
suspends the formed elements and enables them to circulate throughout the 
body within the cardiovascular system. 


Functions of Blood 


The primary function of blood is to deliver oxygen and nutrients to and 
remove wastes from body cells, but that is only the beginning of the story. 
The specific functions of blood also include defense, distribution of heat, 
and maintenance of homeostasis. 


Transportation 


Nutrients from the foods you eat are absorbed in the digestive tract. Most of 
these travel in the bloodstream directly to the liver, where they are 
processed and released back into the bloodstream for delivery to body cells. 
Oxygen from the air you breathe diffuses into the blood, which moves from 
the lungs to the heart, which then pumps it out to the rest of the body. 
Moreover, endocrine glands scattered throughout the body release their 


products, called hormones, into the bloodstream, which carries them to 
distant target cells. Blood also picks up cellular wastes and byproducts, and 
transports them to various organs for removal. For instance, blood moves 
carbon dioxide to the lungs for exhalation from the body, and various waste 
products are transported to the kidneys and liver for excretion from the 
body in the form of urine or bile. 


Defense 


Many types of WBCs protect the body from external threats, such as 
disease-causing bacteria that have entered the bloodstream in a wound. 
Other WBCs seek out and destroy internal threats, such as cells with 
mutated DNA that could multiply to become cancerous, or body cells 
infected with viruses. 


When damage to the vessels results in bleeding, blood platelets and certain 
proteins dissolved in the plasma, the fluid portion of the blood, interact to 
block the ruptured areas of the blood vessels involved. This protects the 
body from further blood loss. 


Maintenance of Homeostasis 


Recall that body temperature is regulated via a classic negative-feedback 
loop. If you were exercising on a warm day, your rising core body 
temperature would trigger several homeostatic mechanisms, including 
increased transport of blood from your core to your body periphery, which 
is typically cooler. As blood passes through the vessels of the skin, heat 
would be dissipated to the environment, and the blood returning to your 
body core would be cooler. In contrast, on a cold day, blood is diverted 
away from the skin to maintain a warmer body core. In extreme cases, this 
may result in frostbite. 


Blood also helps to maintain the chemical balance of the body. Proteins and 
other compounds in blood act as buffers, which thereby help to regulate the 


pH of body tissues. Blood also helps to regulate the water content of body 
cells. 


Composition of Blood 


You have probably had blood drawn from a superficial vein in your arm, 
which was then sent to a lab for analysis. Some of the most common blood 
tests—for instance, those measuring lipid or glucose levels in plasma— 
determine which substances are present within blood and in what quantities. 
Other blood tests check for the composition of the blood itself, including 
the quantities and types of formed elements. 


One such test, called a hematocrit, measures the percentage of RBCs, 
clinically known as erythrocytes, in a blood sample. It is performed by 
spinning the blood sample in a specialized centrifuge, a process that causes 
the heavier elements suspended within the blood sample to separate from 
the lightweight, liquid plasma ({link]). Because the heaviest elements in 
blood are the erythrocytes, these settle at the very bottom of the hematocrit 
tube. Located above the erythrocytes is a pale, thin layer composed of the 
remaining formed elements of blood. These are the WBCGs, clinically 
known as leukocytes, and the platelets, cell fragments also called 
thrombocytes. This layer is referred to as the buffy coat because of its 
color; it normally constitutes less than 1 percent of a blood sample. Above 
the buffy coat is the blood plasma, normally a pale, straw-colored fluid, 
which constitutes the remainder of the sample. 


In normal blood, about 45 percent of a sample is erythrocytes. The 
hematocrit of any one sample can vary significantly, however, about 36—50 
percent, according to gender and other factors. Normal hematocrit values 
for females range from 37 to 47, with a mean value of 41; for males, 
hematocrit ranges from 42 to 52, with a mean of 47. The percentage of 
other formed elements, the WBCs and platelets, is extremely small so it is 
not normally considered with the hematocrit. So the mean plasma 
percentage is the percent of blood that is not erythrocytes: for females, it is 
approximately 59 (or 100 minus 41), and for males, it is approximately 53 
(or 100 minus 47). 

Composition of Blood 


Plasma: 

- Water, proteins, 

nutrients, hormones, 
etc. 


Buffy coat: 
- White blood cells, 
platelets 


Hematocrit: 
- Red blood cells 


Normal Blood: Anemia: Polycythemia: 
Q_ 37%-47% hematocrit Depressed Elevated 
O" 42%-52% hematocrit hematocrit % hematocrit % 


The cellular elements of blood include a 
vast number of erythrocytes and 
comparatively fewer leukocytes and 
platelets. Plasma is the fluid in which the 
formed elements are suspended. A sample 
of blood spun in a centrifuge reveals that 
plasma is the lightest component. It floats 
at the top of the tube separated from the 
heaviest elements, the erythrocytes, by a 
buffy coat of leukocytes and platelets. 
Hematocrit is the percentage of the total 
sample that is comprised of erythrocytes. 
Depressed and elevated hematocrit levels 
are shown for comparison. 


Characteristics of Blood 


When you think about blood, the first characteristic that probably comes to 
mind is its color. Blood that has just taken up oxygen in the lungs is bright 
red, and blood that has released oxygen in the tissues is a more dusky (i.e 
bluish) red. This is because hemoglobin is a pigment that changes color, 
depending upon the degree of oxygen saturation. 


The normal temperature of blood is slightly higher than normal body 
temperature—about 38 °C (or 100.4 °F), compared to 37 °C (or 98.6 °F) for 
an internal body temperature reading, although daily variations of 0.5 °C 
are normal. Although the surface of blood vessels is relatively smooth, as 
blood flows through them, it experiences some friction and resistance, 
especially as vessels age and lose their elasticity, thereby producing heat. 
This accounts for its slightly higher temperature. 


The pH of blood averages about 7.4; however, it can range from 7.35 to 
7.45 in a healthy person. Blood is therefore somewhat more basic (alkaline) 
on a chemical scale than pure water, which has a pH of 7.0. Blood contains 
numerous buffers that actually help to regulate pH. 


Blood constitutes approximately 8 percent of adult body weight. Adult 
males typically average about 5 to 6 liters of blood. Females average 4—5 
liters. 


Blood Plasma 


Like other fluids in the body, plasma is composed primarily of water: In 
fact, it is about 92 percent water. Dissolved or suspended within this water 
is a mixture of substances, most of which are proteins. There are literally 
hundreds of substances dissolved or suspended in the plasma, although 
many of them are found only in very small quantities. 


Plasma Proteins 


About 7 percent of the volume of plasma—nearly all that is not water—is 
made of proteins. These include several plasma proteins (proteins that are 
unique to the plasma), plus a much smaller number of regulatory proteins, 
including enzymes and some hormones. The major components of plasma 
are summarized in [link]. 


The three major groups of plasma proteins are as follows: 


e Albumin is the most abundant of the plasma proteins. Manufactured 
by the liver, albumin molecules serve as binding proteins—transport 
vehicles for fatty acids and steroid hormones. Recall that lipids are 
hydrophobic; however, their binding to albumin enables their transport 
in the watery plasma. Albumin is also the most significant contributor 
to the osmotic pressure of blood; that is, its presence holds water inside 
the blood vessels and draws water from the tissues, across blood vessel 
walls, and into the bloodstream. This in turn helps to maintain both 
blood volume and blood pressure. Albumin normally accounts for 
approximately 54 percent of the total plasma protein content, in 
clinical levels of 3.5—5.0 g/dL blood. 

e The second most common plasma proteins are the globulins. A 
heterogeneous group, there are three main subgroups known as alpha, 
beta, and gamma globulins. The alpha and beta globulins transport 
iron, lipids, and the fat-soluble vitamins A, D, E, and K to the cells; 
like albumin, they also contribute to osmotic pressure. The gamma 
globulins are proteins involved in immunity and are better known as an 
antibodies or immunoglobulins. Although other plasma proteins are 
produced by the liver, immunoglobulins are produced by specialized 
leukocytes known as plasma cells. Globulins make up approximately 
38 percent of the total plasma protein volume, in clinical levels of 1.0— 
1.5 g/dL blood. 

e The least abundant plasma protein is fibrinogen. Like albumin and the 
alpha and beta globulins, fibrinogen is produced by the liver. It is 
essential for blood clotting, a process described later in this chapter. 
Fibrinogen accounts for about 7 percent of the total plasma protein 
volume, in clinical levels of 0.2—0.45 g/dL blood. 


Other Plasma Solutes 


In addition to proteins, plasma contains a wide variety of other substances. 
These include various electrolytes, such as sodium, potassium, and calcium 
ions; dissolved gases, such as oxygen, carbon dioxide, and nitrogen; various 
organic nutrients, such as vitamins, lipids, glucose, and amino acids; and 
metabolic wastes. All of these nonprotein solutes combined contribute 
approximately 1 percent to the total volume of plasma. 


Note: 

Career Connection 

Phlebotomy and Medical Lab Technology 

Phlebotomists are professionals trained to draw blood (phleb- = “a blood 
vessel”; -tomy = “to cut”). When more than a few drops of blood are 
required, phlebotomists perform a venipuncture, typically of a surface vein 
in the arm. They perform a capillary stick on a finger, an earlobe, or the 
heel of an infant when only a small quantity of blood is required. An 
arterial stick is collected from an artery and used to analyze blood gases. 
After collection, the blood may be analyzed by medical laboratories or 
perhaps used for transfusions, donations, or research. While many allied 
health professionals practice phlebotomy, the American Society of 
Phlebotomy Technicians issues certificates to individuals passing a 
national examination, and some large labs and hospitals hire individuals 
expressly for their skill in phlebotomy. 

Medical or clinical laboratories employ a variety of individuals in technical 
positions: 


e Medical technologists (MT), also known as clinical laboratory 
technologists (CLT), typically hold a bachelor’s degree and 
certification from an accredited training program. They perform a 
wide variety of tests on various body fluids, including blood. The 
information they provide is essential to the primary care providers in 
determining a diagnosis and in monitoring the course of a disease and 
response to treatment. 

¢ Medical laboratory technicians (MLT) typically have an associate’s 
degree but may perform duties similar to those of an MT. 

e Medical laboratory assistants (MLA) spend the majority of their time 
processing samples and carrying out routine assignments within the 
lab. Clinical training is required, but a degree may not be essential to 
obtaining a position. 


Chapter Review 


Blood is a fluid connective tissue critical to the transportation of nutrients, 
gases, and wastes throughout the body; to defend the body against infection 
and other threats; and to the homeostatic regulation of pH, temperature, and 
other internal conditions. Blood is composed of formed elements— 
erythrocytes, leukocytes, and cell fragments called platelets—and a fluid 
extracellular matrix called plasma. More than 90 percent of plasma is water. 
The remainder is mostly plasma proteins—mainly albumin, globulins, and 
fibrinogen—and other dissolved solutes such as glucose, lipids, electrolytes, 
and dissolved gases. Blood is also slightly alkaline, and its temperature is 
slightly higher than normal body temperature. 


Critical Thinking Questions 


Exercise: 


Problem: 
Why would it be incorrect to refer to the formed elements as cells? 
Solution: 


The formed elements include erythrocytes and leukocytes, which are 
cells (although mature erythrocytes do not have a nucleus); however, 
the formed elements also include platelets, which are not true cells but 
cell fragments. 


Glossary 


albumin 
most abundant plasma protein, accounting for most of the osmotic 
pressure of plasma 


antibodies 
(also, immunoglobulins or gamma globulins) antigen-specific proteins 
produced by specialized B lymphocytes that protect the body by 
binding to foreign objects such as bacteria and viruses 


blood 
liquid connective tissue composed of formed elements—erythrocytes, 
leukocytes, and platelets—and a fluid extracellular matrix called 
plasma; component of the cardiovascular system 


buffy coat 
thin, pale layer of leukocytes and platelets that separates the 
erythrocytes from the plasma in a sample of centrifuged blood 


fibrinogen 
plasma protein produced in the liver and involved in blood clotting 


formed elements 
cellular components of blood; that is, erythrocytes, leukocytes, and 
platelets 


globulins 
heterogeneous group of plasma proteins that includes transport 
proteins, clotting factors, immune proteins, and others 


hematocrit 
(also, packed cell volume) volume percentage of erythrocytes in a 
sample of centrifuged blood 


immunoglobulins 
(also, antibodies or gamma globulins) antigen-specific proteins 
produced by specialized B lymphocytes that protect the body by 
binding to foreign objects such as bacteria and viruses 


packed cell volume (PCV) 
(also, hematocrit) volume percentage of erythrocytes present in a 
sample of centrifuged blood 


plasma 
in blood, the liquid extracellular matrix composed mostly of water that 
circulates the formed elements and dissolved materials throughout the 
cardiovascular system 


platelets 
(also, thrombocytes) one of the formed elements of blood that consists 
of cell fragments broken off from megakaryocytes 


red blood cells (RBCs) 
(also, erythrocytes) one of the formed elements of blood that transports 
oxygen 


white blood cells (WBCs) 
(also, leukocytes) one of the formed elements of blood that provides 
defense against disease agents and foreign materials 


Erythrocytes 
By the end of this section, you will be able to: 


¢ Describe the anatomy of erythrocytes 
e Explain the composition and function of hemoglobin 


The erythrocyte, commonly known as a red blood cell (or RBC), is by far 
the most common formed element: A single drop of blood contains millions 
of erythrocytes and just thousands of leukocytes. Specifically, males have 
about 5.4 million erythrocytes per microliter (uL) of blood, and females 
have approximately 4.8 million per pL. In fact, erythrocytes are estimated 
to make up about 25 percent of the total cells in the body. As you can 
imagine, they are quite small cells, with a mean diameter of only about 7-8 
micrometers (um). The primary functions of erythrocytes are to pick up 
inhaled oxygen from the lungs and transport it to the body’s tissues, and to 
pick up some (about 24 percent) carbon dioxide waste at the tissues and 
transport it to the lungs for exhalation. Erythrocytes remain within the 
vascular network. Although leukocytes typically leave the blood vessels to 
perform their defensive functions, movement of erythrocytes from the 
blood vessels is abnormal. 


Shape and Structure of Erythrocytes 


As an erythrocyte matures in the red bone marrow, it extrudes its nucleus 
and most of its other organelles. Lacking mitochondria, for example, they 
rely on fermentation. This means that they do not utilize any of the oxygen 
they are transporting, so they can deliver it all to the tissues. They also lack 
endoplasmic reticula and do not synthesize proteins, so they are unable to 
repair themselves. This is why the lifespan of a red blood cell is 
approximately 115 days. However, during this time, the red blood cell has 
traveled approximately 300 miles and made approximately 170,000 circuits 
through the heart (http://www.uptodate.com/contents/red-blood-cell- 
survival-normal-values-and-measurement). 


Erythrocytes are biconcave disks; that is, they are plump at their periphery 
and very thin in the center ({link]). Since they lack most organelles, there is 
more interior space for the presence of the hemoglobin molecules that, as 


you will see shortly, transport gases. The biconcave shape also provides a 
greater surface area across which gas exchange can occur, relative to its 
volume; a sphere of a similar diameter would have a lower surface area-to- 
volume ratio. In the capillaries, the oxygen carried by the erythrocytes can 
diffuse into the plasma and then through the capillary walls to reach the 
cells, whereas some of the carbon dioxide produced by the cells as a waste 
product diffuses into the capillaries to be picked up by the erythrocytes. 
Capillary beds are extremely narrow, slowing the passage of the 
erythrocytes and providing an extended opportunity for gas exchange to 
occur. However, the space within capillaries can be so minute that, despite 
their own small size, erythrocytes may have to fold in on themselves if they 
are to make their way through. Fortunately, their structural proteins are 
flexible, allowing them to bend over themselves to a surprising degree, then 
spring back again when they enter a wider vessel. 

Shape of Red Blood Cells 


4 


Erythrocytes are biconcave 
discs with very shallow centers. 
This shape optimizes the ratio 
of surface area to volume, 
facilitating gas exchange. It also 
enables them to fold up as they 


move through narrow blood 
vessels. 


Hemoglobin 


Hemoglobin is a large molecule made up of proteins and iron. It consists of 
four folded chains of a protein called globin, designated alpha 1 and 2, and 
beta 1 and 2 ({link]a). Each of these globin molecules is bound to a red 
pigment molecule called heme, which contains an ion of iron (Fe**) 
({link]b). 

Hemoglobin 


8 chain 2 


a chain 1 


(a) A molecule of hemoglobin contains four globin 
proteins, each of which is bound to one molecule of the 
iron-containing pigment heme. (b) A single erythrocyte 
can contain 300 million hemoglobin molecules, and thus 

more than 1 billion oxygen molecules. 


Each iron ion in the heme can bind to one oxygen molecule; therefore, each 
hemoglobin molecule can transport four oxygen molecules. An individual 
erythrocyte may contain about 300 million hemoglobin molecules, and 


therefore can bind to and transport up to 1.2 billion oxygen molecules (see 
[link]b). 


In the lungs, hemoglobin picks up oxygen, which binds to the iron ions, 
forming oxyhemoglobin. The bright red, oxygenated hemoglobin travels to 
the body tissues, where it releases some of the oxygen molecules, becoming 
darker red deoxyhemoglobin. Oxygen release depends on the need for 
oxygen in the surrounding tissues, so hemoglobin rarely if ever leaves all of 
its oxygen behind. In the capillaries, carbon dioxide enters the bloodstream. 
About 76 percent dissolves in the plasma, some of it remaining as dissolved 
COs, and the remainder forming bicarbonate ion. About 23—24 percent of it 
binds to the amino acids in hemoglobin, forming a molecule known as 
carbaminohemoglobin. From the capillaries, the hemoglobin carries 
carbon dioxide back to the lungs, where it releases it for exchange of 
oxygen. 


In patients with insufficient hemoglobin, the tissues may not receive 
sufficient oxygen, resulting in another form of anemia. In determining 
oxygenation of tissues, the value of greatest interest in healthcare is the 
percent saturation; that is, the percentage of hemoglobin sites occupied by 
oxygen in a patient’s blood. Clinically this value is commonly referred to 
simply as “percent sat.” 


Percent saturation is normally monitored using a device known as a pulse 
oximeter, which is applied to a thin part of the body, typically the tip of the 
patient’s finger. The device works by sending two different wavelengths of 
light (one red, the other infrared) through the finger and measuring the light 
with a photodetector as it exits. Hemoglobin absorbs light differentially 
depending upon its saturation with oxygen. The machine calibrates the 
amount of light received by the photodetector against the amount absorbed 
by the partially oxygenated hemoglobin and presents the data as percent 
saturation. Normal pulse oximeter readings range from 95-100 percent. 
Lower percentages reflect hypoxemia, or low blood oxygen. The term 
hypoxia is more generic and simply refers to low oxygen levels. Oxygen 
levels are also directly monitored from free oxygen in the plasma typically 
following an arterial stick. When this method is applied, the amount of 


oxygen present is expressed in terms of partial pressure of oxygen or simply 
pO, and is typically recorded in units of millimeters of mercury, mm Hg. 


Lifecycle of Erythrocytes 


Production of erythrocytes in the marrow occurs at the staggering rate of 
more than 2 million cells per second. For this production to occur, a number 
of raw materials must be present in adequate amounts. These include the 
same nutrients that are essential to the production and maintenance of any 
cell, such as glucose, lipids, and amino acids. However, erythrocyte 
production also requires several trace elements: iron, copper, zinc, and 
several types of B vitamins. 


Erythrocytes live up to 120 days in the circulation, after which the worn-out 
cells are removed by a type of phagocytic cell called a macrophage, 
located primarily within the bone marrow, liver, and spleen. The 
components of the degraded erythrocytes’ hemoglobin are further 
processed, with some being retained by the body and others being released 
in the urine and feces. 


The breakdown pigments formed from the destruction of hemoglobin can 
be seen in a variety of situations. At the site of an injury, biliverdin from 
damaged RBCs produces some of the dramatic colors associated with 
bruising. With a failing liver, bilirubin cannot be removed effectively from 
circulation and causes the body to assume a yellowish tinge associated with 
jaundice. Stercobilins within the feces produce the typical brown color 
associated with this waste. And the yellow of urine is associated with the 
urobilins. 


Disorders of Erythrocytes 


The size, shape, and number of erythrocytes, and the number of hemoglobin 
molecules can have a major impact on a person’s health. When the number 
of RBCs or hemoglobin is deficient, the general condition is called anemia. 
There are more than 400 types of anemia and more than 3.5 million 
Americans suffer from this condition. Anemia can be broken down into 
three major groups: those caused by blood loss, those caused by faulty or 


decreased RBC production, and those caused by excessive destruction of 
RBCs. The effects of the various anemias are widespread, because reduced 
numbers of RBCs or hemoglobin will result in lower levels of oxygen being 
delivered to body tissues. Since oxygen is required for tissue functioning, 
anemia produces fatigue, lethargy, and an increased risk for infection. An 
oxygen deficit in the brain impairs the ability to think clearly, and may 
prompt headaches and irritability. Lack of oxygen leaves the patient short of 
breath, even as the heart and lungs work harder in response to the deficit. 


Anemias caused by faulty or decreased RBC production include sickle cell 
anemia, iron deficiency anemia, vitamin deficiency anemia, and diseases of 
the bone marrow and stem cells. 


e A characteristic change in the shape of erythrocytes is seen in sickle 
cell disease (also referred to as sickle cell anemia). A genetic disorder, 
it is caused by production of an abnormal type of hemoglobin, called 
hemoglobin S, which delivers less oxygen to tissues and causes 
erythrocytes to assume a sickle (or crescent) shape, especially at low 
oxygen concentrations ({link]). These abnormally shaped cells can 
then become lodged in narrow capillaries because they are unable to 
fold in on themselves to squeeze through, blocking blood flow to 
tissues and causing a variety of serious problems from painful joints to 
delayed growth and even blindness and cerebrovascular accidents 
(strokes). Sickle cell anemia is a genetic condition particularly found 
in individuals of African descent. 


Sickle Cells 


Sickle cell anemia is caused by 
a mutation in one of the 
hemoglobin genes. Erythrocytes 
produce an abnormal type of 
hemoglobin, which causes the 
cell to take on a sickle or 
crescent shape. (credit: Janice 
Haney Carr) 


e Iron deficiency anemia is the most common type and results when the 
amount of available iron is insufficient to allow production of 
sufficient heme. This condition can occur in individuals with a 
deficiency of iron in the diet and is especially common in teens and 
children as well as in vegans and vegetarians. Additionally, iron 
deficiency anemia may be caused by either an inability to absorb and 
transport iron or slow, chronic bleeding. 

e Vitamin-deficient anemias generally involve insufficient vitamin B12 
and folate. 


o Pernicious anemia is caused by poor absorption of vitamin B12 
and is often seen in patients with Crohn’s disease (a severe 
intestinal disorder often treated by surgery), surgical removal of 
the intestines or stomach (common in some weight loss 
surgeries), intestinal parasites, and AIDS. 

o Pregnancies, some medications, excessive alcohol consumption, 
and some diseases such as celiac disease are also associated with 
vitamin deficiencies. It is essential to provide sufficient folic acid 
during the early stages of pregnancy to reduce the risk of 
neurological defects, including spina bifida, a failure of the neural 
tube to close. 


e Assorted disease processes can also interfere with the production and 
formation of RBCs and hemoglobin. If blood stem cells are defective 
or replaced by cancer cells, there will be insufficient quantities of 
RBCs produced. 


o Aplastic anemia is the condition in which there are deficient 
numbers of RBC stem cells. Aplastic anemia is often inherited, or 
it may be triggered by radiation, medication, chemotherapy, or 
infection. 

o Thalassemia is an inherited condition typically occurring in 
individuals from the Middle East, the Mediterranean, African, and 
Southeast Asia, in which maturation of the RBCs does not 
proceed normally. The most severe form is called Cooley’s 
anemia. 

o Lead exposure from industrial sources or even dust from paint 
chips of iron-containing paints or pottery that has not been 
properly glazed may also lead to destruction of the red marrow. 


In contrast to anemia, an elevated RBC count is called polycythemia and is 
detected in a patient’s elevated hematocrit. It can occur transiently in a 
person who is dehydrated; when water intake is inadequate or water losses 
are excessive, the plasma volume falls. As a result, the hematocrit rises. For 
reasons mentioned earlier, a mild form of polycythemia is chronic but 
normal in people living at high altitudes. Some elite athletes train at high 
elevations specifically to induce this phenomenon. Finally, a type of bone 


marrow disease called polycythemia vera (from the Greek vera = “true”) 
causes an excessive production of immature erythrocytes. Polycythemia 
vera can dangerously elevate the viscosity of blood, raising blood pressure 
and making it more difficult for the heart to pump blood throughout the 
body. It is a relatively rare disease that occurs more often in men than 
women, and is more likely to be present in elderly patients those over 60 
years of age. 


Chapter Review 


The most abundant formed elements in blood, erythrocytes are red, 
biconcave disks packed with an oxygen-carrying compound called 
hemoglobin. The hemoglobin molecule contains four globin proteins bound 
to a pigment molecule called heme, which contains an ion of iron. In the 
bloodstream, iron picks up oxygen in the lungs and drops it off in the 
tissues; the amino acids in hemoglobin then transport carbon dioxide from 
the tissues back to the lungs. Erythrocytes live approximately 115 days on 
average, and thus must be continually replaced. Worn-out erythrocytes are 
phagocytized by macrophages and their hemoglobin is broken down. The 
breakdown products are recycled or removed as wastes. Anemia is a 
deficiency of RBCs or hemoglobin, whereas polycythemia is an excess of 
RBCs. 


Review Questions 


Exercise: 


Problem: 


Which of the following statements about mature, circulating 
erythrocytes is true? 


a. They have no nucleus. 

b. They are packed with mitochondria. 

c. They survive for an average of 4 days. 
d. All of the above 


Solution: 


A 


Exercise: 


Problem:A molecule of hemoglobin 


a. is shaped like a biconcave disk packed almost entirely with iron 

b. contains four glycoprotein units studded with oxygen 

c. consists of four globin proteins, each bound to a molecule of 
heme 

d. can carry up to 120 molecules of oxygen 


Solution: 


C 
Exercise: 


Problem: 


The production of healthy erythrocytes depends upon the availability 
of 


a. Copper 
b. zinc 

c. vitamin By 

d. copper, zinc, and vitamin By 


Solution: 


D 


Exercise: 


Problem: 
Aging and damaged erythrocytes are removed from the circulation by 
a. myeoblasts 
b. monocytes 
c. macrophages 
d. mast cells 
Solution: 


C 


Critical Thinking Questions 


Exercise: 
Problem: 
A young woman has been experiencing unusually heavy menstrual 


bleeding for several years. She follows a strict vegan diet (no animal 
foods). She is at risk for what disorder, and why? 


Solution: 

She is at risk for anemia, because her unusually heavy menstrual 
bleeding results in excessive loss of erythrocytes each month. At the 
same time, her vegan diet means that she does not have dietary sources 
of heme iron. The non-heme iron she consumes in plant foods is not as 
well absorbed as heme iron. 


Glossary 


anemia 


deficiency of red blood cells or hemoglobin 


bilirubin 
yellowish bile pigment produced when iron is removed from heme and 
is further broken down into waste products 


biliverdin 
green bile pigment produced when the non-iron portion of heme is 
degraded into a waste product; converted to bilirubin in the liver 


carbaminohemoglobin 
compound of carbon dioxide and hemoglobin, and one of the ways in 
which carbon dioxide is carried in the blood 


deoxyhemoglobin 
molecule of hemoglobin without an oxygen molecule bound to it 


erythrocyte 
(also, red blood cell) mature myeloid blood cell that is composed 
mostly of hemoglobin and functions primarily in the transportation of 
oxygen and carbon dioxide 


ferritin 
protein-containing storage form of iron found in the bone marrow, 
liver, and spleen 


globin 
heme-containing globular protein that is a constituent of hemoglobin 


heme 
red, iron-containing pigment to which oxygen binds in hemoglobin 


hemoglobin 
oxygen-carrying compound in erythrocytes 


hemosiderin 
protein-containing storage form of iron found in the bone marrow, 
liver, and spleen 


hypoxemia 
below-normal level of oxygen saturation of blood (typically <95 
percent) 


macrophage 
phagocytic cell of the myeloid lineage; a matured monocyte 


oxyhemoglobin 
molecule of hemoglobin to which oxygen is bound 


polycythemia 
elevated level of hemoglobin, whether adaptive or pathological 


reticulocyte 
immature erythrocyte that may still contain fragments of organelles 


sickle cell disease 
(also, sickle cell anemia) inherited blood disorder in which 
hemoglobin molecules are malformed, leading to the breakdown of 
RBCs that take on a characteristic sickle shape 


thalassemia 
inherited blood disorder in which maturation of RBCs does not 
proceed normally, leading to abnormal formation of hemoglobin and 
the destruction of RBCs 


transferrin 
plasma protein that binds reversibly to iron and distributes it 
throughout the body 


Blood Typing and Transfusions 
By the end of this section, you will be able to: 


e Describe the two basic physiological consequences of transfusion of 
incompatible blood 

e Compare and contrast ABO and Rh blood groups 

Identify which blood groups may be safely transfused into patients with 

different ABO types 

e Discuss the pathophysiology of hemolytic disease of the newborn 


Blood transfusions in humans were risky procedures until the discovery of the 
major human blood groups by Karl Landsteiner, an Austrian biologist and 
physician, in 1900. Until that point, physicians did not understand that death 
sometimes followed blood transfusions, when the type of donor blood infused into 
the patient was incompatible with the patient’s own blood. Blood groups are 
determined by the presence or absence of specific marker molecules, called 
antigens, on the plasma membranes of erythrocytes. With their discovery, it became 
possible for the first time to match patient-donor blood types and prevent 
transfusion reactions and deaths. 


Antigens, Antibodies, and Transfusion Reactions 


Antigens are substances that the body does not recognize as belonging to the “self” 
and that therefore trigger a defensive response from the leukocytes (WBC) of the 
immune system. Here, we will focus on the role of immunity, antigens, and 
antibodies in blood transfusion reactions. 


Antigens are generally large proteins, but may include other classes of organic 
molecules, including carbohydrates, lipids, and nucleic acids. Following an 
infusion of incompatible blood, erythrocytes with foreign antigens appear in the 
bloodstream and trigger an immune response. Proteins called antibodies 
(immunoglobulins), which are produced by certain B lymphocytes called plasma 
cells, attach to the antigens on the plasma membranes of the infused erythrocytes 
and cause them to stick to one another (i.e. agglutinate). The clumps of 
erythrocytes block small blood vessels throughout the body, depriving tissues of 
oxygen and nutrients. As the erythrocyte clumps are degraded, in a process called 
hemolysis, their hemoglobin is released into the bloodstream. This hemoglobin 
travels to the kidneys, which are responsible for filtration of the blood. However, 
the load of hemoglobin released can easily overwhelm the kidney’s capacity to 
clear it, and the patient can quickly develop kidney failure. 


More than 50 antigens have been identified on erythrocyte membranes, but the 
most significant in terms of their potential harm to patients are classified in two 
groups: the ABO blood group and the Rh blood group. 


The ABO Blood Group 


Although the ABO blood group name consists of three letters, ABO blood typing 
designates the presence or absence of just two antigens, A and B. Both are 
glycoproteins. People whose erythrocytes have A antigens on their erythrocyte 
membrane surfaces are designated blood type A, and those whose erythrocytes 
have B antigens are blood type B. People can also have both A and B antigens on 
their erythrocytes, in which case they are blood type AB. People with neither A nor 
B antigens are designated blood type O. ABO blood types are genetically 
determined. 


Normally the body must be exposed to a foreign antigen before an antibody can be 
produced. This is not the case for the ABO blood group. Individuals with type A 
blood—without any prior exposure to incompatible blood—have preformed 
antibodies to the B antigen circulating in their blood plasma. These antibodies, 
referred to as anti-B antibodies, will cause agglutination and hemolysis if they ever 
encounter erythrocytes with B antigens. Similarly, an individual with type B blood 
has pre-formed anti-A antibodies. Individuals with type AB blood, which has both 
antigens, do not have preformed antibodies to either of these. People with type O 
blood lack antigens A and B on their erythrocytes, but both anti-A and anti-B 
antibodies circulate in their blood plasma. 


Rh Blood Groups 


The Rh blood group is classified according to the presence or absence of a second 
erythrocyte antigen identified as Rh. (It was first discovered in a type of primate 
known as a rhesus macaque, which is often used in research, because its blood is 
similar to that of humans.) Although dozens of Rh antigens have been identified, 
only one, designated D, is clinically important. Those who have the Rh D antigen 
present on their erythrocytes—about 85 percent of Americans—are described as 
Rh positive (Rh*) and those who lack it are Rh negative (Rh ). Note that the Rh 
group is distinct from the ABO group, so any individual, no matter their ABO 
blood type, may have or lack this Rh antigen. When identifying a patient’s blood 
type, the Rh group is designated by adding the word positive or negative to the 
ABO type. For example, A positive (A*) means ABO group A blood with the Rh 


antigen present, and AB negative (AB ) means ABO group AB blood without the 
Rh antigen. 


[link] summarizes the distribution of the ABO and Rh blood types within the 
United States. 


Summary of ABO and Rh Blood Types within the United States 


Blood African- Asian- Caucasian- Latino/Latina- 
Type Americans Americans Americans Americans 

At 24 27 33 29 

AS 2 0.5 7 2 

Bt 18 25 9 9 

B 1 0.4 2 1 

AB* 4 7 3 2 

AB™ 0.3 0.1 1 0.2 

O* 47 39 a7 53 

O- 4 1 8 4 


In contrast to the ABO group antibodies, which are preformed, antibodies to the Rh 
antigen are produced only in Rh’ individuals after exposure to the antigen. This 
process, called sensitization, occurs following a transfusion with Rh-incompatible 
blood or, more commonly, with the birth of an Rh* baby to an Rh” mother. 
Problems are rare in a first pregnancy, since the baby’s Rh’ cells rarely cross the 
placenta (the organ of gas and nutrient exchange between the baby and the mother). 
However, during or immediately after birth, the Rh’ mother can be exposed to the 
baby’s Rh’ cells ({link]). Research has shown that this occurs in about 13-14 
percent of such pregnancies. After exposure, the mother’s immune system begins 


to generate anti-Rh antibodies. If the mother should then conceive another Rh* 
baby, the Rh antibodies she has produced can cross the placenta into the fetal 
bloodstream and destroy the fetal RBCs. This condition, known as hemolytic 
disease of the newborn (HDN) or erythroblastosis fetalis, may cause anemia in 
mild cases, but the agglutination and hemolysis can be so severe that without 
treatment the fetus may die in the womb or shortly after birth. 

Erythroblastosis Fetalis 


Placenta 
Umbilical 
artery/vein 
(infant) 


Placental arteriole (maternal) 


Placental venule (maternal) 


II 


Maternal blood pool 


First exposure: 
Birth of first Rh* infant 


Embryonic chorion 
(isolates fetal blood 
from maternal 
blood pool) 


(1) During birth, Rh* 
fetal erythrocytes 
leak into maternal 


Infant blood 


blood after breakage 
of the embryonic 
chorion, which 
normally isolates 
the fetal and 
maternal blood. 


Rh* infant 
erythrocyte 


a Embryonic 
chorion 


| Rh” maternal 
| 


blood Maternal B cells 


are activated by 


1 \ Maternal Rh the Rh antigen 


\ \ antibody and produce large 
\ amounts of 
anti-Rh antibodies. 
. NN Second exposure: 
oN Rh* fetus 
f Infant blood 


Rh antibody titer in 
mother’s blood is 
elevated after first 
exposure. 


Rh* infant 
erythrocyte 


Embryonic 
chorion Rh antibodies are 
small enough 


to cross the 


Rh" maternal : ‘ 
blood embryonic chorion 

and attack the fetal 
Maternal Rh erythrocytes. 
antibody 


The first exposure of an Rh” mother to Rh* erythrocytes during 
pregnancy induces sensitization. Anti-Rh antibodies begin to 
circulate in the mother’s bloodstream. A second exposure occurs with 
a subsequent pregnancy with an Rh” fetus in the uterus. Maternal 
anti-Rh antibodies may cross the placenta and enter the fetal 
bloodstream, causing agglutination and hemolysis of fetal 
erythrocytes. 


A drug known as RhoGAM, short for Rh immune globulin, can temporarily 
prevent the development of Rh antibodies in the Rh” mother, thereby averting this 
potentially serious disease for the fetus. RhaoGAM antibodies destroy any fetal Rh* 
erythrocytes that may cross the placental barrier. RhoGAM is normally 
administered to Rh mothers during weeks 26-28 of pregnancy and within 72 
hours following birth. It has proven remarkably effective in decreasing the 
incidence of HDN. Earlier we noted that the incidence of HDN in an Rh* 
subsequent pregnancy to an Rh mother is about 13-14 percent without preventive 
treatment. Since the introduction of RhoGAM in 1968, the incidence has dropped 
to about 0.1 percent in the United States. 


Determining ABO Blood Types 


Clinicians are able to determine a patient’s blood type quickly and easily using 
commercially prepared antibodies. An unknown blood sample is allocated into 
separate wells. Into one well a small amount of anti-A antibody is added, and to 
another a small amount of anti-B antibody. If the antigen is present, the antibodies 
will cause visible agglutination of the cells ({link]). The blood should also be tested 
for Rh antibodies. 

Cross Matching Blood Types 


SAMPLE AB0+D 


Bathe oy - 4 ¥ 
Le i 


a Be att ot x 3 
a ie , 
Agglutinated ms aa 3s 
RBCs = Ape Se i 


Anti-A Anti-B Anti-D 


This sample of a commercially produced 
“bedside” card enables quick typing of both a 
recipient’s and donor’s blood before transfusion. 
The card contains three reaction sites or wells. 
One is coated with an anti-A antibody, one with 
an anti-B antibody, and one with an anti-D 
antibody (tests for the presence of Rh factor D). 
Mixing a drop of blood and saline into each well 
enables the blood to interact with a preparation 
of type-specific antibodies, also called anti- 
seras. Agglutination of RBCs in a given site 
indicates a positive identification of the blood 


antigens, in this case A and Rh antigens for 
blood type A*. For the purpose of transfusion, 
the donor’s and recipient’s blood types must 
match. 


ABO Transfusion Protocols 


To avoid transfusion reactions, it is best to transfuse only matching blood types; 
that is, a type B* recipient should ideally receive blood only from a type B* donor 
and so on. That said, in emergency situations, when acute hemorrhage threatens the 
patient’s life, there may not be time for cross matching to identify blood type. In 
these cases, blood from a universal donor—an individual with type O° blood— 
may be transfused. Recall that type O erythrocytes do not display A or B antigens. 
Thus, anti-A or anti-B antibodies that might be circulating in the patient’s blood 
plasma will not encounter any erythrocyte surface antigens on the donated blood 
and therefore will not be provoked into a response. One problem with this 
designation of universal donor is if the O" individual had prior exposure to Rh 
antigen, Rh antibodies may be present in the donated blood. Also, introducing type 
O blood into an individual with type A, B, or AB blood will nevertheless introduce 
antibodies against both A and B antigens, as these are always circulating in the type 
O blood plasma. This may cause problems for the recipient, but because the 
volume of blood transfused is much lower than the volume of the patient’s own 
blood, the adverse effects of the relatively few infused plasma antibodies are 
typically limited. Rh factor also plays a role. If Rh individuals receiving blood 
have had prior exposure to Rh antigen, antibodies for this antigen may be present in 
the blood and trigger agglutination to some degree. Although it is always preferable 
to cross match a patient’s blood before transfusing, in a true life-threatening 
emergency situation, this is not always possible, and these procedures may be 
implemented. 


A patient with blood type AB" is known as the universal recipient. This patient 
can theoretically receive any type of blood, because the patient’s own blood— 
having both A and B antigens on the erythrocyte surface—does not produce anti-A 
or anti-B antibodies. In addition, an Rh” patient can receive both Rh* and Rh™ 
blood. However, keep in mind that the donor’s blood will contain circulating 
antibodies, again with possible negative implications. [link] summarizes the blood 
types and compatibilities. 


At the scene of multiple-vehicle accidents, military engagements, and natural or 
human-caused disasters, many victims may suffer simultaneously from acute 
hemorrhage, yet type O blood may not be immediately available. In these 
circumstances, medics may at least try to replace some of the volume of blood that 
has been lost. This is done by intravenous administration of a saline solution that 
provides fluids and electrolytes in proportions equivalent to those of normal blood 
plasma. Research is ongoing to develop a safe and effective artificial blood that 
would carry out the oxygen-carrying function of blood without the RBCs, enabling 
transfusions in the field without concern for incompatibility. These blood 
substitutes normally contain hemoglobin- as well as perfluorocarbon-based oxygen 
Carriers. 

ABO Blood Group 


Blood Type 


Red Blood 
Cell Type 


sll? ye 


ea ou oe et 


Antibodies 
in Plasma = Ye “™ 4 \. 4N. 


Anti-A and Anti-B 


Antigens in 
Red blood t f 
Cell Aantigen B antigen A and B antigens None 
Blood Types 
, A, B, AB, O 
ee (AB* is the Ois ie 
E universal recipient) universal donor) 
mergency 


This chart summarizes the characteristics of 
the blood types in the ABO blood group. See 
the text for more on the concept of a universal 
donor or recipient. 


Chapter Review 


Antigens are nonself molecules, usually large proteins, which provoke an immune 
response. In transfusion reactions, antibodies attach to antigens on the surfaces of 
erythrocytes and cause agglutination and hemolysis. ABO blood group antigens are 
designated A and B. People with type A blood have A antigens on their 


erythrocytes, whereas those with type B blood have B antigens. Those with AB 
blood have both A and B antigens, and those with type O blood have neither A nor 
B antigens. The blood plasma contains preformed antibodies against the antigens 
not present on a person’s erythrocytes. 


A second group of blood antigens is the Rh group, the most important of which is 
Rh D. People with Rh’ blood do not have this antigen on their erythrocytes, 
whereas those who are Rh* do. About 85 percent of Americans are Rh*. When a 
woman who is Rh” becomes pregnant with an Rh* fetus, her body may begin to 
produce anti-Rh antibodies. If she subsequently becomes pregnant with a second 
Rh’ fetus and is not treated preventively with RhoGAM, the fetus will be at risk for 
an antigen-antibody reaction, including agglutination and hemolysis. This is known 
as hemolytic disease of the newborn. 


Cross matching to determine blood type is necessary before transfusing blood, 
unless the patient is experiencing hemorrhage that is an immediate threat to life, in 
which case type O' blood may be transfused. 


Review Questions 


Exercise: 


Problem: 


The process in which antibodies attach to antigens, causing the formation of 
masses of linked cells, is called 


a. sensitization 
b. coagulation 
c. agglutination 
d. hemolysis 
Solution: 
Cc 
Exercise: 


Problem:People with ABO blood type O 


a. have both antigens A and B on their erythrocytes 


b. lack both antigens A and B on their erythrocytes 

c. have neither anti-A nor anti-B antibodies circulating in their blood 
plasma 

d. are considered universal recipients 


Solution: 


B 
Exercise: 


Problem: 


Hemolytic disease of the newborn is a risk during a subsequent pregnancy in 
which 


a. a type AB mother is carrying a type O fetus 
b. a type O mother is carrying a type AB fetus 
c. an Rh* mother is carrying an Rh” fetus 

d. an Rh” mother is carrying a second Rh’ fetus 


Solution: 


D 


Critical Thinking Questions 


Exercise: 
Problem: 
Following a motor vehicle accident, a patient is rushed to the emergency 
department with multiple traumatic injuries, causing severe bleeding. The 


patient’s condition is critical, and there is no time for determining his blood 
type. What type of blood is transfused, and why? 


Solution: 


In emergency situations, blood type O' will be infused until cross matching 
can be done. Blood type O is called the universal donor blood because the 


erythrocytes have neither A nor B antigens on their surface, and the Rh factor 
is negative. 


Exercise: 


Problem: 


In preparation for a scheduled surgery, a patient visits the hospital lab for a 
blood draw. The technician collects a blood sample and performs a test to 
determine its type. She places a sample of the patient’s blood in two wells. To 
the first well she adds anti-A antibody. To the second she adds anti-B 
antibody. Both samples visibly agglutinate. Has the technician made an error, 
or is this a normal response? If normal, what blood type does this indicate? 


Solution: 


The lab technician has not made an error. Blood type AB has both A and B 
surface antigens, and neither anti-A nor anti-B antibodies circulating in the 
plasma. When anti-A antibodies (added to the first well) contact A antigens on 
AB erythrocytes, they will cause agglutination. Similarly, when anti-B 
antibodies contact B antigens on AB erythrocytes, they will cause 
agglutination. 


References 


American Red Cross (US). Blood types [Internet]. c2013 [cited 2013 Apr 3]. 


Glossary 


ABO blood group 
blood-type classification based on the presence or absence of A and B 
glycoproteins on the erythrocyte membrane surface 


agglutination 
clustering of cells into masses linked by antibodies 


cross matching 
blood test for identification of blood type using antibodies and small samples 
of blood 


hemolysis 
destruction (lysis) of erythrocytes and the release of their hemoglobin into 
circulation 


hemolytic disease of the newborn (HDN) 
(also, erythroblastosis fetalis) disorder causing agglutination and hemolysis in 
an Rh* fetus or newborn of an Rh” mother 


Rh blood group 
blood-type classification based on the presence or absence of the antigen Rh 
on the erythrocyte membrane surface 


universal donor 
individual with type O" blood 


universal recipient 
individual with type AB* blood 


Introduction to the Cardiovascular System - Heart 
class="introduction" 
Human Heart 


This artist’s 
conception 
of the human 
heart 
suggests a 
powerful 
engine—not 
inappropriat 
e fora 
muscular 
pump that 
keeps the 
body 
continually 
supplied 
with blood. 
(credit: 
Patrick J. 
Lynch) 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


e Identify and describe the interior and exterior parts of the human heart 
e Describe the path of blood through the cardiac circuits 

e Describe the size, shape, and location of the heart 

e¢ Compare cardiac muscle to skeletal and smooth muscle 

e Explain the cardiac conduction system 

e Describe the process and purpose of an electrocardiogram 

e Explain the cardiac cycle 

e Describe the effects of exercise on heart rate 

e Identify other factors affecting heart rate 


In this chapter, you will explore the remarkable pump that propels the blood 
into the vessels. There is no single better word to describe the function of 
the heart other than “pump,” since its contraction develops the pressure that 
ejects blood into the major vessels: the aorta and pulmonary trunk. From 
these vessels, the blood is distributed to the remainder of the body. 
Although the connotation of the term “pump” suggests a mechanical device 
made of steel and plastic, the anatomical structure is a living, sophisticated 
muscle. As you read this chapter, try to keep these twin concepts in mind: 
pump and muscle. 


Although the term “heart” is an English word, cardiac (heart-related) 
terminology can be traced back to the Latin term, “kardia.” Cardiology is 
the study of the heart, and cardiologists are the physicians who deal 
primarily with the heart. 


Heart Anatomy 
By the end of this section, you will be able to: 


e Describe the location and position of the heart within the body cavity 

e Describe the internal and external anatomy of the heart 

e Relate the structure of the heart to its function as a pump 

e Compare systemic circulation to pulmonary circulation 

e Identify the veins and arteries of the coronary circulation system 

e Trace the pathway of oxygenated and deoxygenated blood thorough 
the chambers of the heart 


The vital importance of the heart is obvious. If one assumes an average rate 
of contraction of 75 contractions per minute, a human heart would contract 
approximately 108,000 times in one day, more than 39 million times in one 
year, and nearly 3 billion times during a 75-year lifespan. Each of the major 
pumping chambers of the heart ejects approximately 70 mL blood per 
contraction in a resting adult. This would be equal to 5.25 liters of fluid per 
minute and approximately 14,000 liters per day. Over one year, that would 
equal 10,000,000 liters or 2.6 million gallons of blood sent through roughly 
60,000 miles of vessels. In order to understand how that happens, it is 
necessary to understand the anatomy and physiology of the heart. 


Location of the Heart 


The human heart is located within the thoracic cavity and is separated from 
the other structures by a tough membrane known as the pericardium, or 
pericardial sac. 

Position of the Heart in the Thorax 


/ Thoracic 
Diaphragm r&) aorta 


Inferior vena cava 
Esophagus 


Sagittal view 


Mediastinum 


; Arch of aorta 
Superior vena cava 


Right lung Pulmonary trunk 


Right auricle Left auricle 


Right atrium Left lung 


Right ventricle Left ventricle 


Ribs (cut) Pericardial cavity 


ia 


Apex of heart 


Diaphragm 


Edge of parietal Edge of parietal 
pleura (cut) pericardium (cut) 


The heart is located within the thoracic cavity, medially 
between the lungs in the mediastinum. It is about the size 
of a fist, is broad at the top, and tapers toward the base. 


Note: 

Everyday Connection 

CPR 

The position of the heart in the torso between the vertebrae and sternum 
(see [link] for the position of the heart within the thorax) allows for 
individuals to apply an emergency technique known as cardiopulmonary 
resuscitation (CPR) if the heart of a patient should stop. By applying 
pressure with the flat portion of one hand on the sternum in the area 


between the line at T4 and T9 ((link]), it is possible to manually compress 
the blood within the heart enough to push some of the blood within it into 
the pulmonary and systemic circuits. This is particularly critical for the 
brain, as irreversible damage and death of neurons occur within minutes of 
loss of blood flow. Current standards call for compression of the chest at 
least 5 cm deep and at a rate of 100 compressions per minute, a rate equal 
to the beat in “Staying Alive,” recorded in 1977 by the Bee Gees. If you 
are unfamiliar with this song, a version is available on www.youtube.com. 
At this stage, the emphasis is on performing high-quality chest 
compressions, rather than providing artificial respiration. CPR is generally 
performed until the patient regains spontaneous contraction or is declared 
dead by an experienced healthcare professional. 

When performed by untrained or overzealous individuals, CPR can result 
in broken ribs or a broken sternum, and can inflict additional severe 
damage on the patient. It is also possible, if the hands are placed too low 
on the sternum, to manually drive the xiphoid process into the liver, a 
consequence that may prove fatal for the patient. Proper training is 
essential. This proven life-sustaining technique is so valuable that virtually 
all medical personnel as well as concerned members of the public should 
be certified and routinely recertified in its application. CPR courses are 
offered at a variety of locations, including colleges, hospitals, the 
American Red Cross, and some commercial companies. They normally 
include practice of the compression technique on a mannequin. 

CPR Technique 


If the heart should stop, CPR can maintain 
the flow of blood until the heart resumes 
beating. By applying pressure to the 
sternum, the blood within the heart will be 
squeezed out of the heart and into the 
circulation. Proper positioning of the 
hands on the sternum to perform CPR 
would be between the lines at T4 and T9. 


Shape and Size of the Heart 


A typical heart is approximately the size of your fist: 12 cm (5 in) in length, 
8 cm (3.5 in) wide, and 6 cm (2.5 in) in thickness. Given the size difference 
between most members of the sexes, the weight of a female heart is 
approximately 250-300 grams (9 to 11 ounces), and the weight of a male 
heart is approximately 300-350 grams (11 to 12 ounces). The heart of a 
well-trained athlete, especially one specializing in aerobic sports, can be 
considerably larger than this. Cardiac muscle responds to exercise in a 
manner similar to that of skeletal muscle. That is, exercise results in the 
addition of protein myofilaments that increase the size of the individual 
cells without increasing their numbers, a concept called hypertrophy. Hearts 
of athletes can pump blood more effectively at lower rates than those of 
nonathletes. Enlarged hearts are not always a result of exercise; they can 
result from diseases, such as hypertrophic cardiomyopathy. 


Chambers and Circulation through the Heart 


The human heart consists of four chambers: The left side and the right side 
each have one atrium and one ventricle. Each of the upper chambers, the 
right atrium (plural = atria) and the left atrium, acts as a receiving chamber 
and contracts to push blood into the lower chambers, the right ventricle and 
the left ventricle. The ventricles serve as the primary pumping chambers of 
the heart, propelling blood to the lungs or to the rest of the body. 


There are two distinct but linked circuits in the human circulation called the 
pulmonary and systemic circuits. Although both circuits transport blood and 
everything it carries, we can initially view the circuits from the point of 
view of gases. The pulmonary circuit transports blood to and from the 
lungs, where it picks up oxygen and delivers carbon dioxide for exhalation. 
The systemic circuit transports oxygenated blood to virtually all of the 
tissues of the body and returns relatively deoxygenated blood and carbon 
dioxide to the heart to be sent back to the pulmonary circulation. 


The right ventricle pumps deoxygenated blood into the pulmonary trunk, 
which leads toward the lungs and splits into the left and right pulmonary 
arteries. These vessels in turn branch many times before reaching the 
pulmonary capillaries, where gas exchange occurs: Carbon dioxide exits 
the blood and oxygen enters. The pulmonary trunk arteries and their 
branches are the only arteries in the post-natal body that carry relatively 
deoxygenated blood. Highly oxygenated blood returning from the 
pulmonary capillaries in the lungs passes through a series of vessels that 
join together to form the pulmonary veins—the only post-natal veins in the 
body that carry highly oxygenated blood. The pulmonary veins conduct 
blood into the left atrium, which pumps the blood into the left ventricle, 
which in turn pumps oxygenated blood into the aorta and on to the many 
branches of the systemic circuit. Eventually, these vessels will lead to the 
systemic capillaries, where exchange with the tissue fluid and cells of the 
body occurs. In this case, oxygen and nutrients exit the systemic capillaries 
to be used by the cells in their metabolic processes, and carbon dioxide and 
waste products will enter the blood. 


The blood exiting the systemic capillaries is lower in oxygen concentration 
than when it entered. The capillaries will ultimately unite to form venules, 
joining to form ever-larger veins, eventually flowing into the two major 
systemic veins, the superior vena cava and the inferior vena cava, which 
return blood to the right atrium. The blood in the superior and inferior 
venae cavae flows into the right atrium, which pumps blood into the right 
ventricle. This process of blood circulation continues as long as the 
individual remains alive. Understanding the flow of blood through the 
pulmonary and systemic circuits is critical to all health professions ({link]). 
Dual System of the Human Blood Circulation 


Aorta 


Left pulmonary 
Right pulmonary arteries 


arteries 
Pulmonary trunk 


Left atrium 
Right pulmonary 
veins Left pulmonary 
veins 
Pulmonary 
semilunar 
valve 


Aortic semilunar 
valve 


Mitral valve 
Right atrium 
Tricuspid valve Left ventricle 


Right ventricle 


Systemic Systemic 
veins from capillaries 
upper body of upper 


body 


Systemic 
arteries to 


Pulmona 
es upper body 


capillaries 
in lungs 

Pulmonary 
Right atrium trunk 
Left atrium 
Right 


ventricle Left 

\ ventricle 
Systemic 
veins from 


Systemic 


lower body arteries to 
lower body 

Systemic 

capillaries 


of lower body 


Blood flows from the right atrium to the right ventricle, 
where it is pumped into the pulmonary circuit. The blood in 
the pulmonary artery branches is low in oxygen but 
relatively high in carbon dioxide. Gas exchange occurs in 
the pulmonary capillaries (oxygen into the blood, carbon 
dioxide out), and blood high in oxygen and low in carbon 
dioxide is returned to the left atrium. From here, blood 
enters the left ventricle, which pumps it into the systemic 
circuit. Following exchange in the systemic capillaries 
(oxygen and nutrients out of the capillaries and carbon 


dioxide and wastes in), blood returns to the right atrium and 
the cycle is repeated. 


Membranes, Surface Features, and Layers 


Layers 


The wall of the heart is composed of three layers of unequal thickness. 
From superficial to deep, these are the epicardium, the myocardium, and the 
endocardium. The outermost layer of the wall of the heart is also the 
innermost layer of the pericardium, the epicardium, or the visceral 
pericardium discussed earlier. 


The middle and thickest layer is the myocardium, made largely of cardiac 
muscle cells. It is built upon a framework of collagenous fibers, plus the 
blood vessels that supply the myocardium and the nerve fibers that help 
regulate the heart. It is the contraction of the myocardium that pumps blood 
through the heart and into the major arteries. The muscle pattern is elegant 
and complex, as the muscle cells swirl and spiral around the chambers of 
the heart. They form a figure 8 pattern around the atria and around the bases 
of the great vessels. Deeper ventricular muscles also form a figure 8 around 
the two ventricles and proceed toward the apex. More superficial layers of 
ventricular muscle wrap around both ventricles. This complex swirling 
pattern allows the heart to pump blood more effectively than a simple linear 
pattern would. [link] illustrates the arrangement of muscle cells. 

Heart Musculature 


Atrial 
musculature 


Ventricular 
musculature 


The swirling pattern of 
cardiac muscle tissue 
contributes significantly to 
the heart’s ability to pump 
blood effectively. 


Although the ventricles on the right and left sides pump the same amount of 
blood per contraction, the muscle of the left ventricle is much thicker and 
better developed than that of the right ventricle. In order to overcome the 
high resistance required to pump blood into the long systemic circuit, the 
left ventricle must generate a great amount of pressure. The right ventricle 
does not need to generate as much pressure, since the pulmonary circuit is 
shorter and provides less resistance. [link] illustrates the differences in 
muscular thickness needed for each of the ventricles. 

Differences in Ventricular Muscle Thickness 


Left ventricle 


Right ventricle 


Relaxed Contracted 


The myocardium in the left ventricle is significantly 
thicker than that of the right ventricle. Both ventricles 
pump the same amount of blood, but the left ventricle 

must generate a much greater pressure to overcome 

greater resistance in the systemic circuit. The 
ventricles are shown in both relaxed and contracting 
states. Note the differences in the relative size of the 
lumens, the region inside each ventricle where the 
blood is contained. 


Internal Structure of the Heart 


Recall that the heart’s contraction cycle follows a dual pattern of circulation 
—the pulmonary and systemic circuits—because of the pairs of chambers 
that pump blood into the circulation. In order to develop a more precise 
understanding of cardiac function, it is first necessary to explore the internal 
anatomical structures in more detail. 


Septa of the Heart 


There are four openings that allow blood to move from the atria into the 
ventricles and from the ventricles into the pulmonary trunk and aorta. 
Located in each of these openings between the atria and ventricles is a 
valve, a specialized structure that ensures one-way flow of blood. The 
valves between the atria and ventricles are known generically as 
atrioventricular (AV) valves. The valves at the openings that lead to the 
pulmonary trunk and aorta are known generically as semilunar valves. 
Internal Structures of the Heart 


Aorta 


Superior vena cava Left pulmonary artery 


Right pulmonary artery Left atrium 


Pulmonary trunk Left pulmonary veins 
Right pulmonary 
veins Mitral (bicuspid) valve 


Right atrium 


. Aortic valve 
Fossa ovalis 


Tricuspid valve Pulmonary valve 


Right ventricle Left ventricle 


Chordae tendineae Papillary muscle 
———— Interventricular septum 
Epicardium 
Myocardium 
Endocardium 


Trabeculae carneae 


Moderator band 


Inferior vena cava 


Anterior view 


This anterior view of the heart shows the four 
chambers, the major vessels and their early branches, 
as well as the valves. 


Right Atrium 


The right atrium serves as the receiving chamber for blood returning to the 
heart from the systemic circulation. The two major systemic veins, the 
superior and inferior venae cavae, and the large coronary vein called the 
coronary sinus that drains the heart myocardium empty into the right 


atrium. The superior vena cava drains blood from regions abover the 
diaphragm: the head, neck, upper limbs, and the thoracic region. It empties 
into the superior and posterior portions of the right atrium. The inferior 
vena cava drains blood from areas below the diaphragm: the lower limbs 
and abdominal and pelvic region of the body. It, too, empties into the 
posterior portion of the atria, but is below the opening of the superior vena 
cava. The majority of the internal heart structures discussed in this and 
subsequent sections are illustrated in the provided figure. 


The atria receive venous blood on a nearly continuous basis, preventing 
venous flow from stopping while the ventricles are contracting. While most 
ventricular filling occurs while the atria are relaxed, they do demonstrate a 
contractile phase and actively pump blood into the ventricles just prior to 
ventricular contraction. The opening between the atrium and ventricle is 
guarded by the tricuspid valve. 


Right Ventricle 


The right ventricle receives blood from the right atrium through the 
tricuspid valve. Each flap of the valve is attached to strong strands of 
connective tissue, the chordae tendineae, literally “tendinous cords,” or 
sometimes more poetically referred to as “heart strings.” There are several 
chordae tendineae associated with each of the flaps. They are composed of 
approximately 80 percent collagenous fibers with the remainder consisting 
of elastic fibers and endothelium. They connect each of the flaps to a 
papillary muscle. 


When the myocardium of the ventricle contracts, pressure within the 
ventricular chamber rises. Blood, like any fluid, flows from higher pressure 
to lower pressure areas, in this case, toward the pulmonary trunk and the 
atrium. To prevent any potential backflow, the papillary muscles also 
contract, generating tension on the chordae tendineae. This prevents the 
flaps of the valves from being forced into the atria and regurgitation of the 
blood back into the atria during ventricular contraction. [link] shows 
papillary muscles and chordae tendineae attached to the tricuspid valve. 
Chordae Tendineae and Papillary Muscles 


Chordae tendineae 
Papillary muscles 


Trabeculae carneae 


In this frontal section, you can see papillary 
muscles attached to the tricuspid valve on 
the right as well as the mitral valve on the 

left via chordae tendineae. (credit: 
modification of work by “PV 
KS”/flickr.com) 


When the right ventricle contracts, it ejects blood into the pulmonary trunk, 
which branches into the left and right pulmonary arteries that carry it to 
each lung. The superior surface of the right ventricle begins to taper as it 
approaches the pulmonary trunk. At the base of the pulmonary trunk is the 
pulmonary semilunar valve that prevents backflow from the pulmonary 
trunk. 


Left Atrium 


After exchange of gases in the pulmonary capillaries, blood returns to the 
left atrium high in oxygen via one of the four pulmonary veins. Blood flows 
nearly continuously from the pulmonary veins back into the atrium, which 
acts as the receiving chamber, and from here through an opening into the 


left ventricle. Most blood flows passively into the heart while both the atria 
and ventricles are relaxed, but toward the end of the ventricular relaxation 
period, the left atrium will contract, pumping blood into the ventricle. This 
atrial contraction accounts for approximately 20 percent of ventricular 
filling. The opening between the left atrium and ventricle is guarded by the 
mitral valve. 


Left Ventricle 


Recall that, although both sides of the heart will pump the same amount of 
blood, the muscular layer is much thicker in the left ventricle compared to 
the right (see [link]). The mitral valve is connected to papillary muscles via 
chordae tendineae. 


The left ventricle is the major pumping chamber for the systemic circuit; it 
ejects blood into the aorta through the aortic semilunar valve. 


Heart Valve Structure and Function 


A transverse section through the heart slightly above the level of the 
atrioventricular septum reveals all four heart valves along the same plane 
({link]). The valves ensure unidirectional blood flow through the heart. 
Between the right atrium and the right ventricle is the right 
atrioventricular valve, or tricuspid valve. It typically consists of three 
flaps, or leaflets, made of endocardium reinforced with additional 
connective tissue. The flaps are connected by chordae tendineae to the 
papillary muscles, which control the opening and closing of the valves. 
Heart Valves 


Posterior 


Tricuspid valve Bicuspid (mitral) 


Right 
side of 
heart 


Aortic valve Pulmonary valve 


Anterior 


With the atria and major vessels removed, all 
four valves are clearly visible, although it is 
difficult to distinguish the three separate cusps 
of the tricuspid valve. 


Emerging from the right ventricle at the base of the pulmonary trunk is the 
pulmonary semilunar valve or the right semilunar valve. The pulmonary 
valve is comprised of three small flaps of endothelium reinforced with 
connective tissue. When the ventricle relaxes, the pressure differential 
causes blood to flow back into the ventricle from the pulmonary trunk. This 
flow of blood fills the pocket-like flaps of the pulmonary valve, causing the 
valve to close and producing an audible sound ("Lub"). Unlike the 
atrioventricular valves, there are no papillary muscles or chordae tendineae 
associated with the pulmonary valve. 


Located at the opening between the left atrium and left ventricle is the 
mitral valve, also called the bicuspid valve or the left atrioventricular 
valve. Structurally, this valve consists of two cusps compared to the three 
cusps of the tricuspid valve. In a clinical setting, the valve is referred to as 
the mitral valve, rather than the bicuspid valve. The two cusps of the mitral 


valve are attached by chordae tendineae to two papillary muscles that 
project from the wall of the ventricle. 


At the base of the aorta is the aortic semilunar valve, or the aortic valve, 
which prevents backflow from the aorta. It normally is composed of three 
flaps. When the ventricle relaxes and blood attempts to flow back into the 
ventricle from the aorta, blood will fill the cusps of the valve, causing it to 
close and producing an audible sound ("dub/dup"). 


In [link]a, the two atrioventricular valves are open and the two semilunar 
valves are closed. This occurs when both atria and ventricles are relaxed 
and when the atria contract to pump blood into the ventricles. [link]b shows 
a frontal view. Although only the left side of the heart is illustrated, the 
process is virtually identical on the right. 

Blood Flow from the Left Atrium to the Left Ventricle 


Posterior 


Tricuspid 
valve 
(open) 

< 


Bicuspid (mitral) valve 


(closed) 


Anterior Aploned) 


(a) Mitral 
valve 
(open) 


Aortic valve 
(Closed) 


Chordae 
tendineae 
(loose) 


Papillary 
muscle 
(relaxed) 


(b) 


(a) A transverse section through the heart illustrates 


the four heart valves. The two atrioventricular valves 
are open; the two semilunar valves are closed. The 
atria and vessels have been removed. (b) A frontal 

section through the heart illustrates blood flow 

through the mitral valve. When the mitral valve is 

open, it allows blood to move from the left atrium to 

the left ventricle. The aortic semilunar valve is closed 

to prevent backflow of blood from the aorta to the left 

ventricle. 


[link]a shows the atrioventricular valves closed while the two semilunar 
valves are open. This occurs when the ventricles contract to eject blood into 
the pulmonary trunk and aorta. Closure of the two atrioventricular valves 
prevents blood from being forced back into the atria. This stage can be seen 
from a frontal view in [link]b. 

Blood Flow from the Left Ventricle into the Great Vessels 


Posterior 


Tricuspid Bicuspid (mitral) valve 
valve —— ~ £ (closed) 
(closed) “a . A 


Left 
side of \\\ . \ side of 


heart 


Aortic 
valve 
(open) 


Pulmonary 
valve 
Anterior open) 
(a) Mitral 
valve 
(closed) 


Aortic valve 
(open) 
Chordae 
tendineae 
(tight) 
Papillary 
muscle 
(contracted) 


(b) 


(a) A transverse section through the heart illustrates 
the four heart valves during ventricular contraction. 
The two atrioventricular valves are closed, but the two 
semilunar valves are open. The atria and vessels have 
been removed. (b) A frontal view shows the closed 
mitral (bicuspid) valve that prevents backflow of 
blood into the left atrium. The aortic semilunar valve 
is open to allow blood to be ejected into the aorta. 


When the ventricles begin to contract, pressure within the ventricles rises 
and blood flows toward the area of lowest pressure, which is initially in the 
atria. This backflow causes the cusps of the tricuspid and mitral (bicuspid) 
valves to close. These valves are tied down to the papillary muscles by 
chordae tendineae. During the relaxation phase of the cardiac cycle, the 


papillary muscles are also relaxed and the tension on the chordae tendineae 
is slight (see [link]b). However, as the myocardium of the ventricle 
contracts, so do the papillary muscles. This creates tension on the chordae 
tendineae (see [link]b), helping to hold the cusps of the atrioventricular 
valves in place and preventing them from being blown back into the atria. 


The aortic and pulmonary semilunar valves lack the chordae tendineae and 
papillary muscles associated with the atrioventricular valves. Instead, they 
consist of pocket-like folds of endocardium reinforced with additional 
connective tissue. When the ventricles relax and the change in pressure 
forces the blood toward the ventricles, the blood presses against these cusps 
and seals the openings. 


Note: 


meme OPENStAX COLLEGE” 
— 


F 


coe 


Visit this site to observe an echocardiogram of actual heart valves opening 
and closing. Although much of the heart has been “removed” from this gif 
loop so the chordae tendineae are not visible, why is their presence more 
critical for the atrioventricular valves (tricuspid and mitral) than the 
semilunar (aortic and pulmonary) valves? 


Note: 

Disorders of the... 

Heart Valves 

When heart valves do not function properly, they are often described as 
incompetent and result in valvular heart disease, which can range from 
benign to lethal. Some of these conditions are congenital, that is, the 
individual was born with the defect, whereas others may be attributed to 


disease processes or trauma. Some malfunctions are treated with 
medications, others require surgery, and still others may be mild enough 
that the condition is merely monitored since treatment might trigger more 
Serious Consequences. 

Valvular disorders are often caused by carditis, or inflammation of the 
heart. One common trigger for this inflammation is rheumatic fever, or 
scarlet fever, an autoimmune response to the presence of a bacterium, 
Streptococcus pyogenes, normally a disease of childhood. 

While any of the heart valves may be involved in valve disorders, mitral 
regurgitation is the most common, detected in approximately 2 percent of 
the population, and the pulmonary semilunar valve is the least frequently 
involved. When a valve malfunctions, the flow of blood to a region will 
often be disrupted. The resulting inadequate flow of blood to this region 
will be described in general terms as an insufficiency. The specific type of 
insufficiency is named for the valve involved: aortic insufficiency, mitral 
insufficiency, tricuspid insufficiency, or pulmonary insufficiency. 

If one of the cusps of the valve is forced backward by the force of the 
blood, the condition is referred to as a prolapsed valve. Prolapse may occur 
if the chordae tendineae are damaged or broken, causing the closure 
mechanism to fail. The failure of the valve to close properly disrupts the 
normal one-way flow of blood and results in regurgitation, when the blood 
flows backward from its normal path. Using a stethoscope, the disruption 
to the normal flow of blood produces a heart murmur. 

Stenosis is a condition in which the heart valves become rigid and may 
calcify over time. The loss of flexibility of the valve interferes with normal 
function and may cause the heart to work harder to propel blood through 
the valve, which eventually weakens the heart. Aortic stenosis affects 
approximately 2 percent of the population over 65 years of age, and the 
percentage increases to approximately 4 percent in individuals over 85 
years. Occasionally, one or more of the chordae tendineae will tear or the 
papillary muscle itself may die as a component of a myocardial infarction 
(heart attack). In this case, the patient’s condition will deteriorate 
dramatically and rapidly, and immediate surgical intervention may be 
required. 

Auscultation, or listening to a patient’s heart sounds, is one of the most 
useful diagnostic tools, since it is proven, safe, and inexpensive. The term 
auscultation is derived from the Latin for “to listen,” and the technique has 


been used for diagnostic purposes as far back as the ancient Egyptians. 
Valve and septal disorders will trigger abnormal heart sounds. If a valvular 
disorder is detected or suspected, a test called an echocardiogram, or 
simply an “echo,” may be ordered. Echocardiograms are sonograms of the 
heart and can help in the diagnosis of valve disorders as well as a wide 
variety of heart pathologies. 


Note: 


[= aC 


Visit this site for a free download, including excellent animations and 
audio of heart sounds. 


Note: 

Career Connection 

Cardiologist 

Cardiologists are medical doctors that specialize in the diagnosis and 
treatment of diseases of the heart. After completing 4 years of medical 
school, cardiologists complete a three-year residency in internal medicine 
followed by an additional three or more years in cardiology. Following this 
10-year period of medical training and clinical experience, they qualify for 
a rigorous two-day examination administered by the Board of Internal 
Medicine that tests their academic training and clinical abilities, including 
diagnostics and treatment. After successful completion of this examination, 
a physician becomes a board-certified cardiologist. Some board-certified 
cardiologists may be invited to become a Fellow of the American College 
of Cardiology (FACC). This professional recognition is awarded to 
outstanding physicians based upon merit, including outstanding 


credentials, achievements, and community contributions to cardiovascular 
medicine. 


Note: 
uae 
—_ 7 
= openstax COLLEGE” 


Visit this site to learn more about cardiologists. 


Note: 

Career Connection 

Cardiovascular Technologist/Technician 

Cardiovascular technologists/technicians are trained professionals who 
perform a variety of imaging techniques, such as sonograms or 
echocardiograms, used by physicians to diagnose and treat diseases of the 
heart. Nearly all of these positions require an associate degree, and these 
technicians earn a median salary of $49,410 as of May 2010, according to 
the U.S. Bureau of Labor Statistics. Growth within the field is fast, 
projected at 29 percent from 2010 to 2020. 

There is a considerable overlap and complementary skills between cardiac 
technicians and vascular technicians, and so the term cardiovascular 
technician is often used. Special certifications within the field require 
documenting appropriate experience and completing additional and often 
expensive certification examinations. These subspecialties include 
Certified Rhythm Analysis Technician (CRAT), Certified Cardiographic 
Technician (CCT), Registered Congenital Cardiac Sonographer (RCCS), 
Registered Cardiac Electrophysiology Specialist (RCES), Registered 
Cardiovascular Invasive Specialist (RCIS), Registered Cardiac 


Sonographer (RCS), Registered Vascular Specialist (RVS), and Registered 
Phlebology Sonographer (RPhS). 


Note: 
[=] [a] 
ih 
=> openstax COLLEGE” 
ine t 
[yr 


Visit this site for more information on cardiovascular 
technologists/technicians. 


Coronary Circulation 


You will recall that the heart is a remarkable pump composed largely of 
cardiac muscle cells that are incredibly active throughout life. Like all other 
cells, a cardiomyocyte requires a reliable supply of oxygen and nutrients, 
and a way to remove wastes, so it needs a dedicated, complex, and 
extensive coronary circulation. And because of the critical and nearly 
ceaseless activity of the heart throughout life, this need for a blood supply is 
even greater than for a typical cell. However, coronary circulation is not 
continuous; rather, it cycles, reaching a peak when the heart muscle is 
relaxed and nearly ceasing while it is contracting. 


Coronary Arteries and Veins 


Coronary arteries supply blood to the myocardium and other components 
of the heart. The first portion of the aorta after it arises from the left 
ventricle gives rise to the coronary arteries (right and left), which bring 
freshly oxygenated blood to the tissues of both sides of the heart. A 


coronary artery blockage often results in death of the cells (due to 
myocardial infarction/heart attack) supplied by the particular blood vessel. 
Coronary veins drain the heart and generally parallel the large surface 
arteries. 


Note: 

Diseases of the... 

Heart: Myocardial Infarction 

Myocardial infarction (MI) is the formal term for what is commonly 
referred to as a heart attack. It normally results from a lack of blood flow 
(ischemia) and oxygen (hypoxia) to a region of the heart, resulting in death 
of the cardiac muscle cells. An MI often occurs when a coronary artery is 
blocked by the buildup of atherosclerotic plaque consisting of lipids, 
cholesterol and fatty acids, and white blood cells, primarily macrophages. 
It can also occur when a portion of an unstable atherosclerotic plaque 
travels through the coronary arterial system and lodges in one of the 
smaller vessels. The resulting blockage restricts the flow of blood and 
oxygen to the myocardium and causes death of the tissue. MIs may be 
triggered by excessive exercise, in which the partially occluded artery is no 
longer able to pump sufficient quantities of blood, or severe stress, which 
may induce spasm of the smooth muscle in the walls of the vessel. 

In the case of acute MI, there is often sudden pain beneath the sternum 
called angina pectoris, often radiating down the left arm in males but not in 
female patients. Until this anomaly between the sexes was discovered, 
many female patients suffering MIs were misdiagnosed and sent home. In 
addition, patients typically present with difficulty breathing and shortness 
of breath, irregular heartbeat, nausea and vomiting, sweating, anxiety, and 
fainting, although not all of these symptoms may be present. Many of the 
symptoms are shared with other medical conditions, including anxiety 
attacks and simple indigestion, so differential diagnosis is critical. It is 
estimated that between 22 and 64 percent of MIs present without any 
symptoms. 

Immediate treatments for MI are essential and include administering 
supplemental oxygen, aspirin that helps to break up clots, and 
nitroglycerine administered sublingually (under the tongue) to facilitate its 


absorption. Despite its unquestioned success in treatments and use since 
the 1880s, the mechanism of nitroglycerine is still incompletely understood 
but is believed to involve the release of nitric oxide, a known vasodilator, 
and endothelium-derived releasing factor, which also relaxes the smooth 
muscle in the tunica media of coronary vessels. Longer-term treatments 
include injections of thrombolytic agents such as streptokinase that 
dissolve the clot, the anticoagulant heparin, balloon angioplasty and stents 
to open blocked vessels, and bypass surgery to allow blood to pass around 
the site of blockage. If the damage is extensive, coronary replacement with 
a donor heart or coronary assist device, a sophisticated mechanical device 
that supplements the pumping activity of the heart, may be employed. 
Despite the attention, development of artificial hearts to augment the 
severely limited supply of heart donors has proven less than satisfactory 
but will likely improve in the future. 


Coronary Artery Disease 


Note: 

Coronary artery disease is the leading cause of death worldwide. It occurs 
when the buildup of plaque—a fatty material including cholesterol, 
connective tissue, white blood cells, and some smooth muscle cells— 
within the walls of the arteries obstructs the flow of blood and decreases 
the flexibility or compliance of the vessels. This condition is called 
atherosclerosis, a hardening of the arteries that involves the accumulation 
of plaque. As the coronary blood vessels become occluded, the flow of 
blood to the tissues will be restricted, a condition called ischemia that 
causes the cells to receive insufficient amounts of oxygen, called hypoxia. 
[link] shows the blockage of coronary arteries highlighted by the injection 
of dye. Some individuals with coronary artery disease report pain radiating 
from the chest called angina pectoris, but others remain asymptomatic. If 
untreated, coronary artery disease can lead to MI or a heart attack. 
Atherosclerotic Coronary Arteries 


> ~ 


Blockage of common trunk “wy 
of left coronary artery 


In this coronary angiogram (X-ray), the dye 
makes visible two occluded coronary 
arteries. Such blockages can lead to 
decreased blood flow (ischemia) and 
insufficient oxygen (hypoxia) delivered to 
the cardiac tissues. If uncorrected, this can 
lead to cardiac muscle death (myocardial 
infarction). 


The disease progresses slowly and often begins in children and can be seen 
as fatty “streaks” in the vessels. It then gradually progresses throughout 
life. Well-documented risk factors include smoking, family history, 
hypertension, obesity, diabetes, high alcohol consumption, lack of exercise, 
stress, and hyperlipidemia or high circulating levels of lipids in the blood. 
Treatments may include medication, changes to diet and exercise, 
angioplasty with a balloon catheter, insertion of a stent, or coronary bypass 
procedure. 


Angioplasty is a procedure in which the occlusion is mechanically widened 
with a balloon. A specialized catheter with an expandable tip is inserted 
into a superficial vessel, normally in the leg, and then directed to the site of 
the occlusion. At this point, the balloon is inflated to compress the plaque 
material and to open the vessel to increase blood flow. Then, the balloon is 
deflated and retracted. A stent consisting of a specialized mesh is typically 
inserted at the site of occlusion to reinforce the weakened and damaged 
walls. Stent insertions have been routine in cardiology for more than 40 
years. 

Coronary bypass surgery may also be performed. This surgical procedure 
grafts a replacement vessel obtained from another, less vital portion of the 
body to bypass the occluded area. This procedure is clearly effective in 
treating patients experiencing a MI, but overall does not increase longevity. 
Nor does it seem advisable in patients with stable although diminished 
cardiac capacity since frequently loss of mental acuity occurs following the 
procedure. Long-term changes to behavior, emphasizing diet and exercise 
plus a medicine regime tailored to lower blood pressure, lower cholesterol 
and lipids, and reduce clotting are equally as effective. 


Chapter Review 


The heart resides within the pericardial sac. The walls of the heart are 
composed of three layers of tissue, including a thick myocardium. The 
human heart consists of a pair of atria, which receive blood and pump it into 
a pair of ventricles, which pump blood into the vessels. The right atrium 
receives systemic blood relatively low in oxygen and pumps it into the right 
ventricle, which pumps it into the pulmonary circuit. Exchange of oxygen 
and carbon dioxide occurs in the lungs, and blood high in oxygen returns to 
the left atrium, which pumps blood into the left ventricle, which in turn 
pumps blood into the aorta and the remainder of the systemic circuit. The 
two openings between the atria and ventricles are guarded by the 
atrioventricular valves, the right tricuspid valve and the left mitral valve, 
which prevent the backflow of blood when the ventricles contract. Each is 
attached to chordae tendineae that extend to the papillary muscles, which 
are extensions of the myocardium, to prevent the valves from being blown 


back into the atria. The pulmonary semilunar valve is located at the base of 
the pulmonary trunk, and the left semilunar valve is located at the base of 
the aorta. The right and left coronary arteries are the first to branch off the 
aorta. Cardiac veins parallel the cardiac arteries and eventually drain into 
the right atrium. 


Review Questions 


Exercise: 


Problem: 


Which of the following is not important in preventing backflow of 
blood? 


a. chordae tendineae 
b. papillary muscles 
c. AV valves 

d. endocardium 


Solution: 


D 


Exercise: 
Problem: Which valve separates the left atrium from the left ventricle? 
a. mitral 
b. tricuspid 
c. pulmonary 
d. aortic 


Solution: 


A 


Exercise: 


Problem: 


Which of the following lists the valves in the order through which the 
blood flows from the vena cava through the heart? 


a. tricuspid, pulmonary semilunar, bicuspid, aortic semilunar 
b. mitral, pulmonary semilunar, bicuspid, aortic semilunar 

c. aortic semilunar, pulmonary semilunar, tricuspid, bicuspid 
d. bicuspid, aortic semilunar, tricuspid, pulmonary semilunar 


Solution: 


A 
Exercise: 


Problem: 


Which chamber initially receives blood from the systemic circuit? 


a. left atrium 

b. left ventricle 
c. right atrium 
d. right ventricle 


Solution: 


C 


Exercise: 


Problem:The myocardium would be the thickest in the 


a. left atrium 
b. left ventricle 
c. right atrium 


d. right ventricle 


Solution: 


B 


Critical Thinking Questions 


Exercise: 


Problem: 


Describe how the valves keep the blood moving in one direction. 
Solution: 


When the ventricles contract and pressure begins to rise in the 
ventricles, there is an initial tendency for blood to flow back 
(regurgitate) to the atria. However, the papillary muscles also contract, 
placing tension on the chordae tendineae and holding the 
atrioventricular valves (tricuspid and mitral) in place to prevent the 
valves from prolapsing and being forced back into the atria. The 
semilunar valves (pulmonary and aortic) lack chordae tendineae and 
papillary muscles, but do not face the same pressure gradients as do 
the atrioventricular valves. As the ventricles relax and pressure drops 
within the ventricles, there is a tendency for the blood to flow 
backward. However, the valves, consisting of reinforced endothelium 
and connective tissue, fill with blood and seal off the opening 
preventing the return of blood. 


Exercise: 


Problem: 


Why is the pressure in the pulmonary circulation lower than in the 
systemic circulation? 


Solution: 


The pulmonary circuit consists of blood flowing to and from the lungs, 
whereas the systemic circuit carries blood to and from the entire body. 
The systemic circuit is far more extensive, consisting of far more 
vessels and offers much greater resistance to the flow of blood, so the 
heart must generate a higher pressure to overcome this resistance. This 
can be seen in the thickness of the myocardium in the ventricles. 


Glossary 


anastomosis 
(plural = anastomoses) area where vessels unite to allow blood to 
circulate even if there may be partial blockage in another branch 


anterior cardiac veins 
vessels that parallel the small cardiac arteries and drain the anterior 
surface of the right ventricle; bypass the coronary sinus and drain 
directly into the right atrium 


anterior interventricular artery 
(also, left anterior descending artery or LAD) major branch of the left 
coronary artery that follows the anterior interventricular sulcus 


anterior interventricular sulcus 
sulcus located between the left and right ventricles on the anterior 
surface of the heart 


aortic valve 
(also, aortic semilunar valve) valve located at the base of the aorta 


atrioventricular septum 
cardiac septum located between the atria and ventricles; 
atrioventricular valves are located here 


atrioventricular valves 
one-way valves located between the atria and ventricles; the valve on 
the right is called the tricuspid valve, and the one on the left is the 
mitral or bicuspid valve 


atrium 
(plural = atria) upper or receiving chamber of the heart that pumps 
blood into the lower chambers just prior to their contraction; the right 
atrium receives blood from the systemic circuit that flows into the right 
ventricle; the left atrium receives blood from the pulmonary circuit 
that flows into the left ventricle 


auricle 
extension of an atrium visible on the superior surface of the heart 


bicuspid valve 
(also, mitral valve or left atrioventricular valve) valve located between 
the left atrium and ventricle; consists of two flaps of tissue 


cardiac notch 
depression in the medial surface of the inferior lobe of the left lung 
where the apex of the heart is located 


cardiac skeleton 
(also, skeleton of the heart) reinforced connective tissue located within 
the atrioventricular septum; includes four rings that surround the 
openings between the atria and ventricles, and the openings to the 
pulmonary trunk and aorta; the point of attachment for the heart valves 


cardiomyocyte 
muscle cell of the heart 


chordae tendineae 
string-like extensions of tough connective tissue that extend from the 
flaps of the atrioventricular valves to the papillary muscles 


circumflex artery 
branch of the left coronary artery that follows coronary sulcus 


coronary arteries 
branches of the ascending aorta that supply blood to the heart; the left 
coronary artery feeds the left side of the heart, the left atrium and 
ventricle, and the interventricular septum; the right coronary artery 


feeds the right atrium, portions of both ventricles, and the heart 
conduction system 


coronary sinus 
large, thin-walled vein on the posterior surface of the heart that lies 
within the atrioventricular sulcus and drains the heart myocardium 
directly into the right atrium 


coronary sulcus 
sulcus that marks the boundary between the atria and ventricles 


coronary veins 
vessels that drain the heart and generally parallel the large surface 
arteries 


endocardium 


innermost layer of the heart lining the heart chambers and heart valves; 


composed of endothelium reinforced with a thin layer of connective 
tissue that binds to the myocardium 


endothelium 
layer of smooth, simple squamous epithelium that lines the 
endocardium and blood vessels 


epicardial coronary arteries 
surface arteries of the heart that generally follow the sulci 


epicardium 
innermost layer of the serous pericardium and the outermost layer of 
the heart wall 


foramen ovale 
opening in the fetal heart that allows blood to flow directly from the 
right atrium to the left atrium, bypassing the fetal pulmonary circuit 


fossa ovalis 
oval-shaped depression in the interatrial septum that marks the former 
location of the foramen ovale 


great cardiac vein 
vessel that follows the interventricular sulcus on the anterior surface of 
the heart and flows along the coronary sulcus into the coronary sinus 
on the posterior surface; parallels the anterior interventricular artery 
and drains the areas supplied by this vessel 


hypertrophic cardiomyopathy 
pathological enlargement of the heart, generally for no known reason 


inferior vena cava 
large systemic vein that returns blood to the heart from the inferior 
portion of the body 


interatrial septum 
cardiac septum located between the two atria; contains the fossa ovalis 
after birth 


interventricular septum 
cardiac septum located between the two ventricles 


left atrioventricular valve 
(also, mitral valve or bicuspid valve) valve located between the left 
atrium and ventricle; consists of two flaps of tissue 


marginal arteries 
branches of the right coronary artery that supply blood to the 
superficial portions of the right ventricle 


mesothelium 
simple squamous epithelial portion of serous membranes, such as the 
superficial portion of the epicardium (the visceral pericardium) and the 
deepest portion of the pericardium (the parietal pericardium) 


middle cardiac vein 
vessel that parallels and drains the areas supplied by the posterior 
interventricular artery; drains into the great cardiac vein 


mitral valve 


(also, left atrioventricular valve or bicuspid valve) valve located 
between the left atrium and ventricle; consists of two flaps of tissue 


moderator band 
band of myocardium covered by endocardium that arises from the 
inferior portion of the interventricular septum in the right ventricle and 
crosses to the anterior papillary muscle; contains conductile fibers that 
carry electrical signals followed by contraction of the heart 


myocardium 
thickest layer of the heart composed of cardiac muscle cells built upon 
a framework of primarily collagenous fibers and blood vessels that 
supply it and the nervous fibers that help to regulate it 


papillary muscle 
extension of the myocardium in the ventricles to which the chordae 
tendineae attach 


pectinate muscles 
muscular ridges seen on the anterior surface of the right atrium 


pericardial cavity 
cavity surrounding the heart filled with a lubricating serous fluid that 
reduces friction as the heart contracts 


pericardial sac 
(also, pericardium) membrane that separates the heart from other 
mediastinal structures; consists of two distinct, fused sublayers: the 
fibrous pericardium and the parietal pericardium 


pericardium 
(also, pericardial sac) membrane that separates the heart from other 
mediastinal structures; consists of two distinct, fused sublayers: the 
fibrous pericardium and the parietal pericardium 


posterior cardiac vein 
vessel that parallels and drains the areas supplied by the marginal 
artery branch of the circumflex artery; drains into the great cardiac 


vein 


posterior interventricular artery 
(also, posterior descending artery) branch of the right coronary artery 
that runs along the posterior portion of the interventricular sulcus 
toward the apex of the heart and gives rise to branches that supply the 
interventricular septum and portions of both ventricles 


posterior interventricular sulcus 
sulcus located between the left and right ventricles on the anterior 
surface of the heart 


pulmonary arteries 
left and right branches of the pulmonary trunk that carry deoxygenated 
blood from the heart to each of the lungs 


pulmonary capillaries 
capillaries surrounding the alveoli of the lungs where gas exchange 
occurs: carbon dioxide exits the blood and oxygen enters 


pulmonary circuit 
blood flow to and from the lungs 


pulmonary trunk 
large arterial vessel that carries blood ejected from the right ventricle; 
divides into the left and right pulmonary arteries 


pulmonary valve 
(also, pulmonary semilunar valve, the pulmonic valve, or the right 
semilunar valve) valve at the base of the pulmonary trunk that prevents 
backflow of blood into the right ventricle; consists of three flaps 


pulmonary veins 
veins that carry highly oxygenated blood into the left atrium, which 
pumps the blood into the left ventricle, which in turn pumps 
oxygenated blood into the aorta and to the many branches of the 
systemic circuit 


right atrioventricular valve 
(also, tricuspid valve) valve located between the right atrium and 
ventricle; consists of three flaps of tissue 


semilunar valves 
valves located at the base of the pulmonary trunk and at the base of the 
aorta 


septum 
(plural = septa) walls or partitions that divide the heart into chambers 


septum primum 
flap of tissue in the fetus that covers the foramen ovale within a few 
seconds after birth 


small cardiac vein 
parallels the right coronary artery and drains blood from the posterior 
surfaces of the right atrium and ventricle; drains into the great cardiac 
vein 


sulcus 
(plural = sulci) fat-filled groove visible on the surface of the heart; 
coronary vessels are also located in these areas 


superior vena cava 
large systemic vein that returns blood to the heart from the superior 
portion of the body 


systemic circuit 
blood flow to and from virtually all of the tissues of the body 


trabeculae carneae 
ridges of muscle covered by endocardium located in the ventricles 


tricuspid valve 
term used most often in clinical settings for the right atrioventricular 
valve 


valve 
in the cardiovascular system, a specialized structure located within the 
heart or vessels that ensures one-way flow of blood 


ventricle 
one of the primary pumping chambers of the heart located in the lower 
portion of the heart; the left ventricle is the major pumping chamber on 
the lower left side of the heart that ejects blood into the systemic 
circuit via the aorta and receives blood from the left atrium; the right 
ventricle is the major pumping chamber on the lower right side of the 
heart that ejects blood into the pulmonary circuit via the pulmonary 
trunk and receives blood from the right atrium 


Cardiac Muscle and Electrical Activity 
By the end of this section, you will be able to: 


e Describe the structure of cardiac muscle 

¢ Identify and describe the components of the conducting system that 
distributes electrical impulses through the heart 

e Relate characteristics of an electrocardiogram to events in the cardiac 
cycle 

¢ Identify blocks that can interrupt the cardiac cycle 


Recall that cardiac muscle shares a few characteristics with both skeletal 
muscle and smooth muscle, but it has some unique properties of its own. 
Not the least of these exceptional properties is its ability to initiate an 
electrical potential at a fixed rate that spreads rapidly from cell to cell to 
trigger the contraction mechanism. This property is known as 
autorhythmicity. Neither smooth nor skeletal muscle can do this. Even 
though cardiac muscle has autorhythmicity, heart rate is modulated by the 
endocrine and nervous systems. 


Structure of Cardiac Muscle 


Compared to the giant cylinders of skeletal muscle, cardiac muscle cells, or 
cardiomyocytes, are considerably shorter with much smaller diameters. 
Cardiac muscle also demonstrates striations, the alternating pattern of dark 
A bands and light I bands attributed to the precise arrangement of the 
myofilaments and fibrils that are organized in sarcomeres along the length 
of the cell ({link]a). These contractile elements are virtually identical to 
skeletal muscle. T (transverse) tubules penetrate from the surface plasma 
membrane, the sarcolemma, to the interior of the cell, allowing the 
electrical impulse to reach the interior. The T tubules are only found at the 
Z, discs, whereas in skeletal muscle, they are found at the junction of the A 
and I bands. Therefore, there are one-half as many T tubules in cardiac 
muscle as in skeletal muscle. In addition, the sarcoplasmic reticulum stores 
few calcium ions, so most of the calcium ions must come from outside the 
cells. The result is a slower onset of contraction. Mitochondria are plentiful, 
providing energy for the contractions of the heart. Typically, 


cardiomyocytes have a single, central nucleus, but two or more nuclei may 
be found in some cells. 


Cardiac muscle cells branch freely. A junction between two adjoining cells 
is marked by a critical structure called an intercalated disc, which helps 
support the synchronized contraction of the muscle ([link]b). The 
importance of strongly binding these cells together is necessitated by the 
forces exerted by contraction. 

Cardiac Muscle 


Intercalated discs 


Intercalated discs 


Mitochondria Intercalated discs 


Nucleus 
__-<24 
[ ——$—— 


Gap junction 


Cardiac 
muscle fiber 


(a) 


Desmosome 


— 
A band | band 
(c) 


(a) Cardiac muscle cells have intercalated discs that are 
found at the junction of different cardiac muscle cells. (b) A 
photomicrograph of cardiac muscle cells shows the nuclei 
and intercalated discs. (Micrograph provided by the 


Regents of the University of Michigan Medical School © 
2012) 


Note: 

Everyday Connection 

Repair and Replacement 

Damaged cardiac muscle cells have extremely limited abilities to repair 
themselves or to replace dead cells via mitosis. Recent evidence indicates 
that at least some stem cells remain within the heart that continue to divide 
and at least potentially replace these dead cells. However, newly formed or 
repaired cells are rarely as functional as the original cells, and cardiac 
function is reduced. In the event of a heart attack or MI, dead cells are 
often replaced by patches of scar tissue. Autopsies performed on 
individuals who had successfully received heart transplants show some 
proliferation of original cells. If researchers can unlock the mechanism that 
generates new cells and restore full mitotic capabilities to heart muscle, the 
prognosis for heart attack survivors will be greatly enhanced. 


Conduction System of the Heart 


If embryonic heart cells are separated into a Petri dish and kept alive, each 
is capable of generating its own electrical impulse followed by contraction. 
When two independently beating embryonic cardiac muscle cells are placed 
together, the cell with the higher inherent rate sets the pace, and the impulse 
spreads from the faster to the slower cell to trigger a contraction. As more 
cells are joined together, the fastest cell continues to assume control of the 
rate. A fully developed adult heart maintains the capability of generating its 
own electrical impulse, triggered by the fastest cells, as part of the cardiac 
conduction system. The components of the cardiac conduction system 
include the sinoatrial (SA) node, the atrioventricular (AV) node, the 
atrioventricular bundle, the atrioventricular bundle branches, and the 
Purkinje fibers ([link]). 

Conduction System of the Heart 


AN ~> 


Frontal plane 
through heart 


4 
| 


<< Arch of aorta 


= -~ 


arma Bachman’s bundle 


Sinoatrial 
(SA) node 
Anterior internodal 


Atrioventricular 
(AV) node 


Middle internodal 


Left atrium 


Atrioventricular (AV) 
bundle (bundle of His) 


Posterior internodal 
Left ventricle 


Right and left bundle 
branches 


Right atrium 
Right ventricle 


Purkinje fibers 


Anterior view of frontal section 


Specialized conducting components of the heart include 
the sinoatrial (SA) node, the atrioventricular (AV) node, 
the atrioventricular bundle, the right and left bundle 
branches, and the Purkinje fibers. 


Sinoatrial (SA) Node 


Normal cardiac rhythm is established by the sinoatrial (SA) node, a 
specialized clump of myocardial conducting cells located in the superior 
and posterior walls of the right atrium in close proximity to the opening of 
the superior vena cava. The SA node is known as the pacemaker of the 
heart. It initiates the sinus rhythm, or normal electrical pattern followed by 
contraction of the heart. 


This impulse spreads from its initiation in the SA node throughout the atria 
to the atrioventricular (AV) node. The impulse takes approximately 50 ms 
(milliseconds) to travel between these two nodes. The connective tissue of 
the cardiac skeleton prevents the impulse from spreading into the 


myocardial cells in the ventricles except at the atrioventricular node. [link] 
illustrates the initiation of the impulse in the SA node that then spreads the 
impulse throughout the atria to the atrioventricular node. 

Cardiac Conduction 


(1) The sinoatrial (SA) node and the 
remainder of the conduction system are at 
rest. (2) The SA node initiates the action 
potential, which sweeps across the atria. (3) 
After reaching the atrioventricular node, 
there is a delay of approximately 100 ms 
that allows the atria to complete pumping 
blood before the impulse is transmitted to 
the atrioventricular bundle. (4) Following 
the delay, the impulse travels through the 
atrioventricular bundle and bundle branches 
to the Purkinje fibers. (5) The impulse 
spreads to the contractile fibers of the 
ventricle. (6) Ventricular contraction begins. 


Atrioventricular (AV) Node 


The atrioventricular (AV) node is a second clump of specialized 
conductive cells, located in the lower portion of the right atrium within the 
atrioventricular wall. There is a critical pause before the AV node initiates 
an impulse and transmits it to the atrioventricular bundle (see [link], step 3). 


Atrioventricular Bundle (Bundle of His), Bundle Branches, and 
Purkinje Fibers 


Arising from the AV node, the atrioventricular bundle, proceeds through 
the septum before dividing into two atrioventricular bundle branches, 
commonly called the left and right bundle branches. The left bundle branch 
supplies the left ventricle, and the right bundle branch the right ventricle. 
Both bundle branches descend and reach the apex of the heart where they 
connect with the Purkinje fibers (see [link], step 4). 


The Purkinje fibers are additional myocardial conductive fibers that spread 
the impulse to the myocardial contractile cells in the ventricles. Since the 
electrical stimulus begins at the apex, the contraction also begins at the apex 
and travels toward the base of the heart, similar to squeezing a tube of 
toothpaste from the bottom. This allows the blood to be pumped out of the 
ventricles and into the aorta and pulmonary trunk. 


Electrocardiogram 


By careful placement of surface electrodes on the body, it is possible to 
record the complex, compound electrical signal of the heart. This tracing of 
the electrical signal is the electrocardiogram (ECG), also commonly 
abbreviated EKG (K coming kardiology, from the German term for 
cardiology). Careful analysis of the ECG reveals a detailed picture of both 
normal and abnormal heart function, and is an indispensable clinical 


diagnostic tool. The standard electrocardiograph (the instrument that 
generates an ECG) uses 3, 5, or 12 leads. The greater the number of leads 
an electrocardiograph uses, the more information the ECG provides. The 
term “lead” may be used to refer to the cable from the electrode to the 
electrical recorder, but it typically describes the voltage difference between 
two of the electrodes. The 12-lead electrocardiograph uses 10 electrodes 
placed in standard locations on the patient’s skin ([link]). In continuous 
ambulatory electrocardiographs, the patient wears a small, portable, battery- 
operated device known as a Holter monitor, that continuously monitors 
heart electrical activity, typically for a period of 24 hours during the 
patient’s normal routine. 

Standard Placement of ECG Leads 


In a 12-lead ECG, six electrodes are 
placed on the chest, and four 
electrodes are placed on the limbs. 


A normal ECG tracing is presented in [link]. Each component, segment, 
and interval is labeled and corresponds to important electrical events, 
demonstrating the relationship between these events and contraction in the 
heart. 


There are five prominent points on the ECG: the P wave, the QRS complex, 
and the T wave. The small P wave represents the depolarization of the atria. 
The atria begin contracting approximately 25 ms after the start of the P 
wave. The large QRS complex represents the depolarization of the 
ventricles, which requires a much stronger electrical signal because of the 
larger size of the ventricular cardiac muscle. The ventricles begin to 
contract as the QRS reaches the peak of the R wave. Lastly, the T wave 
represents the repolarization of the ventricles. The repolarization of the atria 
occurs during the QRS complex, which masks it on an ECG. 


Note: 
arnae 
a openstax ie 
Cai St 


Visit this site for a more detailed analysis of ECGs. 


Electrocardiogram 


P-R S-T 
segment segment 


Millivolts 


QRS complex 


PR interval QT interval 


A normal tracing shows the P wave, QRS 
complex, and T wave. Additional segments and 
intervals are also shown. 


ECG Tracing Correlated to the Cardiac Cycle 


=a 


This diagram correlates an ECG tracing with the 


electrical and mechanical events of a heart contraction. 
Each segment of an ECG tracing corresponds to one 
event in the cardiac cycle. 


Note: 

Everyday Connection 

While interpretation of an ECG is possible and extremely valuable after 
some training, a full understanding of the complexities and intricacies 
generally requires several years of experience. In general, the size of the 
electrical variations, the duration of the events, and detailed analysis 
provide the most comprehensive picture of cardiac function. For example, 
an amplified P wave may indicate enlargement of the atria and an enlarged 
Q wave may indicate a MI (Myocardial Infarction). T waves often appear 
flatter when insufficient oxygen is being delivered to the myocardium. 

As useful as analyzing these electrical recordings may be, there are 
limitations. For example, not all areas suffering a MI may be obvious on 
the ECG. Additionally, it will not reveal the effectiveness of the pumping, 
which requires further testing, such as an ultrasound test called an 
echocardiogram or nuclear medicine imaging. Common abnormalities that 
may be detected by the ECGs are shown in [link]. 

Common ECG Abnormalities 


Second-degree (partial) block 


Atrial fibrillation 


Ventricular tachycardia 


Ventricular fibrillation 


Third-degree block 


Note how half of the P waves 
are not followed by the QRS 
complex and T waves while the 
other half are. 

Question: What would you 
expect to happen to heart rate 
(pulse)? 


Note the abnormal electrical 
pattern prior to the QRS 
complexes. Also note how the 
frequency between the QRS 
complexes has increased. 
Question: What would you 
expect to happen to heart rate 
(pulse)? 


Note the unusual shape of the 
QRS complex, focusing on the 
“S” component. 

Question: What would you 
expect to happen to heart rate 
(pulse)? 


Note the total lack of normal 
electrical activity. 

Question: What would you 
expect to happen to heart 
rate (pulse)? 


Note that in a third-degree block 
some of the impulses initiated by 
the SA node do not reach the 

AV node while others do. Also note 
that the P waves are not followed 
by the QRS complex. 

Question: What would you expect 
to happen to heart rate (pulse)? 


(a) In a second-degree or partial block, one-half of the P 
waves are not followed by the QRS complex and T waves 
while the other half are. (b) In atrial fibrillation, the 
electrical pattern is abnormal prior to the QRS complex, 
and the frequency between the QRS complexes has 
increased. (c) In ventricular tachycardia, the shape of the 
QRS complex is abnormal. (d) In ventricular fibrillation, 
there is no normal electrical activity. (e) In a third-degree 
block, there is no correlation between atrial activity (the P 
wave) and ventricular activity (the QRS complex). 


Note: 

Everyday Connection 

External Automated Defibrillators 

In the event that the electrical activity of the heart is severely disrupted, 
cessation of electrical activity or fibrillation may occur. In fibrillation, the 
heart beats in a wild, uncontrolled manner, which prevents it from being 
able to pump effectively. Atrial fibrillation (see [link]b) is a serious 
condition, but as long as the ventricles continue to pump blood, the 
patient’s life may not be in immediate danger. Ventricular fibrillation (see 
[link ]d) is a medical emergency that requires life support, because the 
ventricles are not effectively pumping blood. In a hospital setting, it is 
often described as “code blue.” If untreated for as little as a few minutes, 
ventricular fibrillation may lead to brain death. The most common 
treatment is defibrillation, which uses special paddles to apply a charge to 
the heart from an external electrical source in an attempt to establish a 
normal sinus rhythm ([link]). A defibrillator effectively stops the heart so 
that the SA node can trigger a normal conduction cycle. Because of their 
effectiveness in reestablishing a normal sinus rhythm, external automated 
defibrillators (EADs) are being placed in areas frequented by large 
numbers of people, such as schools, restaurants, and airports. These 
devices contain simple and direct verbal instructions that can be followed 
by nonmedical personnel in an attempt to save a life. 

Defibrillators 


(a) An external automatic defibrillator can be used by 
nonmedical personnel to reestablish a normal sinus rhythm 
in a person with fibrillation. (b) Defibrillator paddles are 


more commonly used in hospital settings. (credit b: 
“widerider107”/flickr.com) 


When arrhythmias become a chronic problem, the heart maintains a 
junctional rhythm, which originates in the AV node. In order to speed up the 
heart rate and restore full sinus rhythm, a cardiologist can implant an 
artificial pacemaker, which delivers electrical impulses to the heart 
muscle to ensure that the heart continues to contract and pump blood 
effectively. These artificial pacemakers are programmable by the 
cardiologists and can either provide stimulation temporarily upon demand 
or on a continuous basis. Some devices also contain built-in defibrillators. 


Chapter Review 


The heart is regulated by both neural and endocrine (i.e. hormonal) control, 
yet it is capable of initiating its own action potential followed by muscular 
contraction. The conductive cells within the heart establish the heart rate 
and transmit it through the myocardium. The contractile cells contract and 
propel the blood. The normal path of transmission for the conductive cells 
is the sinoatrial (SA) node, atrioventricular (AV) node, atrioventricular (AV) 
bundle, bundle branches, and Purkinje fibers. Recognizable points on the 
ECG include the P wave that corresponds to atrial depolarization (i.e. 
contraction), the QRS complex that corresponds to ventricular 
depolarization, and the T wave that corresponds to ventricular 
repolarization (relaxation). 


Review Questions 


Exercise: 


Problem: Which of the following is unique to cardiac muscle cells? 


a. Only cardiac muscle contains a sarcoplasmic reticulum. 

b. Only cardiac muscle has gap junctions. 

c. Only cardiac muscle is capable of autorhythmicity 

d. Only cardiac muscle has a high concentration of mitochondria. 


Solution: 


C 
Exercise: 


Problem: 


Which portion of the ECG corresponds to repolarization (i.e. 
relaxation) of the atria? 


a. P wave 

b. QRS complex 

c. T wave 

d. none of the above: atrial repolarization is masked by ventricular 
depolarization 


Solution: 


D 


Critical Thinking Questions 


Exercise: 


Problem: 


How does the delay of the impulse at the atrioventricular node 
contribute to cardiac function? 


Solution: 


It ensures sufficient time for the atrial muscle to contract and pump 
blood into the ventricles prior to the impulse being conducted into the 
lower chambers. 


Glossary 


artificial pacemaker 
medical device that transmits electrical signals to the heart to ensure 
that it contracts and pumps blood to the body 


atrioventricular bundle 
(also, bundle of His) group of specialized myocardial conductile cells 
that transmit the impulse from the AV node through the 
interventricular septum; form the left and right atrioventricular bundle 
branches 


atrioventricular bundle branches 
(also, left or right bundle branches) specialized myocardial conductile 
cells that arise from the bifurcation of the atrioventricular bundle and 
pass through the interventricular septum; lead to the Purkinje fibers 
and also to the right papillary muscle via the moderator band 


atrioventricular (AV) node 
clump of myocardial cells located in the inferior portion of the right 
atrium within the atrioventricular septum; receives the impulse from 
the SA node, pauses, and then transmits it into specialized conducting 
cells within the interventricular septum 


autorhythmicity 
ability of cardiac muscle to initiate its own electrical impulse that 
triggers the mechanical contraction that pumps blood at a fixed pace 
without nervous or endocrine control 


Bachmann’s bundle 
(also, interatrial band) group of specialized conducting cells that 
transmit the impulse directly from the SA node in the right atrium to 
the left atrium 


bundle of His 
(also, atrioventricular bundle) group of specialized myocardial 
conductile cells that transmit the impulse from the AV node through 
the interventricular septum; form the left and right atrioventricular 
bundle branches 


electrocardiogram (ECG) 
surface recording of the electrical activity of the heart that can be used 
for diagnosis of irregular heart function; also abbreviated as EKG 


heart block 
interruption in the normal conduction pathway 


interatrial band 
(also, Bachmann’s bundle) group of specialized conducting cells that 
transmit the impulse directly from the SA node in the right atrium to 
the left atrium 


intercalated disc 
physical junction between adjacent cardiac muscle cells; consisting of 
desmosomes, specialized linking proteoglycans, and gap junctions that 
allow passage of ions between the two cells 


internodal pathways 
specialized conductile cells within the atria that transmit the impulse 
from the SA node throughout the myocardial cells of the atrium and to 
the AV node 


myocardial conducting cells 
specialized cells that transmit electrical impulses throughout the heart 
and trigger contraction by the myocardial contractile cells 


myocardial contractile cells 
bulk of the cardiac muscle cells in the atria and ventricles that conduct 
impulses and contract to propel blood 


P wave 


component of the electrocardiogram that represents the depolarization 
of the atria 


pacemaker 
cluster of specialized myocardial cells known as the SA node that 
initiates the sinus rhythm 


prepotential depolarization 
(also, spontaneous depolarization) mechanism that accounts for the 
autorhythmic property of cardiac muscle; the membrane potential 
increases as sodium ions diffuse through the always-open sodium ion 
channels and causes the electrical potential to rise 


Purkinje fibers 
specialized myocardial conduction fibers that arise from the bundle 
branches and spread the impulse to the myocardial contraction fibers 
of the ventricles 


QRS complex 
component of the electrocardiogram that represents the depolarization 
of the ventricles and includes, as a component, the repolarization of the 
atria 


sinoatrial (SA) node 
known as the pacemaker, a specialized clump of myocardial 
conducting cells located in the superior portion of the right atrium that 
has the highest inherent rate of depolarization that then spreads 
throughout the heart 


sinus rhythm 
normal contractile pattern of the heart 


spontaneous depolarization 
(also, prepotential depolarization) the mechanism that accounts for the 
autorhythmic property of cardiac muscle; the membrane potential 
increases as sodium ions diffuse through the always-open sodium ion 
channels and causes the electrical potential to rise 


T wave 
component of the electrocardiogram that represents the repolarization 
of the ventricles 


Cardiac Cycle 
By the end of this section, you will be able to: 


e Describe the relationship between blood pressure and blood flow 

e Summarize the events of the cardiac cycle 

e¢ Compare atrial and ventricular systole and diastole 

e Relate heart sounds detected by auscultation to action of heart’s valves 


The period of time that begins with contraction of the atria and ends with 
ventricular relaxation is known as the cardiac cycle ([link]). The period of 
contraction that the heart undergoes while it pumps blood into circulation is 
called systole. The period of relaxation that occurs as the chambers fill with 
blood is called diastole. Both the atria and ventricles undergo systole and 
diastole, and it is essential that these components be carefully regulated and 
coordinated to ensure blood is pumped efficiently to the body. 

Overview of the Cardiac Cycle 


| 


The cardiac cycle begins with atrial systole and 
progresses to ventricular systole, atrial 
diastole, and ventricular diastole, when the 
cycle begins again. Correlations to the ECG 
are highlighted. 


Pressures and Flow 


Fluids, whether gases or liquids, are materials that flow according to 
pressure gradients—that is, they move from regions that are higher in 
pressure to regions that are lower in pressure. Accordingly, when the heart 
chambers are relaxed (diastole), blood will flow into the atria from the 
veins, which are higher in pressure. As blood flows into the atria, the 
pressure will rise, so the blood will initially move passively from the atria 
into the ventricles. When the action potential triggers the muscles in the 
atria to contract (atrial systole), the pressure within the atria rises further, 
pumping blood into the ventricles. During ventricular systole, pressure rises 
in the ventricles, pumping blood into the pulmonary trunk from the right 
ventricle and into the aorta from the left ventricle. Again, as you consider 
this flow and relate it to the conduction pathway, the elegance of the system 
should become apparent. 


Phases of the Cardiac Cycle 


At the beginning of the cardiac cycle, both the atria and ventricles are 
relaxed (diastole). Blood is flowing into the right atrium from the superior 
and inferior venae cavae and the coronary sinus. Blood flows into the left 
atrium from the four pulmonary veins. The two atrioventricular valves, the 
tricuspid and mitral valves, are both open, so blood flows unimpeded from 
the atria and into the ventricles. Approximately 70—80 percent of ventricular 
filling occurs by this method. The two semilunar valves, the pulmonary and 
aortic valves, are closed, preventing backflow of blood into the right and 
left ventricles from the pulmonary trunk on the right and the aorta on the 
left. 


Atrial Systole and Diastole 


Contraction of the atria follows depolarization, represented by the P wave 
of the ECG. As the atrial muscles contract from the superior portion of the 
atria toward the atrioventricular septum, pressure rises within the atria and 
blood is pumped into the ventricles through the open atrioventricular 
(tricuspid, and mitral or bicuspid) valves. At the start of atrial systole, the 
ventricles are normally filled with approximately 70-80 percent of their 
capacity due to inflow during diastole. Atrial contraction, also referred to as 
the “atrial kick,” contributes the remaining 20—30 percent of filling (see 
[link]). Atrial systole ends prior to ventricular systole, as the atrial muscle 
returns to diastole. 


Ventricular Systole 


Ventricular systole (see [link]) follows the depolarization of the ventricles 
and is represented by the QRS complex in the ECG. It may be conveniently 
divided into two phases, lasting a total of 270 ms. At the end of atrial 
systole and just prior to atrial contraction, the ventricles contain 
approximately 130 mL blood in a resting adult in a standing position. This 
volume is known as the end diastolic volume (EDV) or preload. 


Initially, as the muscles in the ventricle contract, the pressure of the blood 
within the chamber rises, but it is not yet high enough to open the semilunar 
(pulmonary and aortic) valves and be ejected from the heart. However, 
blood pressure quickly rises above that of the atria that are now relaxed and 
in diastole. This increase in pressure causes blood to flow back toward the 
atria, closing the tricuspid and mitral valves. 


In the second phase of ventricular systole, the contraction of the ventricular 
muscle has raised the pressure within the ventricle to the point that it is 
greater than the pressures in the pulmonary trunk and the aorta. Blood is 
pumped from the heart, pushing open the pulmonary and aortic semilunar 
valves. Pressure generated by the left ventricle will be appreciably greater 
than the pressure generated by the right ventricle, since the existing 


pressure in the aorta will be so much higher. Nevertheless, both ventricles 
pump the same amount of blood. 


Ventricular Diastole 


Ventricular relaxation, or diastole, follows repolarization of the ventricles 
and is represented by the T wave of the ECG. 


During the early phase of ventricular diastole, as the ventricular muscle 
relaxes, pressure on the remaining blood within the ventricle begins to fall. 
When pressure within the ventricles drops below pressure in both the 
pulmonary trunk and aorta, blood flows back toward the heart. The 
semilunar valves close to prevent backflow into the heart. 


In the second phase of ventricular diastole, as the ventricular muscle 
relaxes, pressure on the blood within the ventricles drops even further. 
Eventually, it drops below the pressure in the atria. When this occurs, blood 
flows from the atria into the ventricles, pushing open the tricuspid and 
mitral valves. As pressure drops within the ventricles, blood flows from the 
major veins into the relaxed atria and from there into the ventricles. Both 
chambers are in diastole, the atrioventricular valves are open, and the 
semilunar valves remain closed (see [link]). The cardiac cycle is complete. 


[link] illustrates the relationship between the cardiac cycle and the ECG. 
Relationship between the Cardiac Cycle and ECG 
R 


po Nenireslenaeriies = 


One cardiac cycle 


Initially, both the atria and ventricles are relaxed 
(diastole). The P wave represents depolarization of the 
atria and is followed by atrial contraction (systole). 
Atrial systole extends until the QRS complex, at 
which point, the atria relax. The QRS complex 
represents depolarization of the ventricles and is 
followed by ventricular contraction. The T wave 
represents the repolarization of the ventricles and 
marks the beginning of ventricular relaxation. 


Heart Sounds 


One of the simplest, yet effective, diagnostic techniques applied to assess 
the state of a patient’s heart is auscultation using a stethoscope. 


In a normal, healthy heart, there are only two audible heart sounds: Lub 
and Dup (or Dub). “Lub,” or first heart sound is the sound created by the 
closing of the atrioventricular valves during ventricular contraction . The 
second heart sound,"Dup" (or "Dub") is the sound of the closing of the 
semilunar valves during ventricular diastole. 


The term murmur is used to describe an unusual sound coming from the 
heart that is caused by the turbulent flow of blood. Murmurs are graded on a 
scale of 1 to 6, with 1 being the most common, the most difficult sound to 
detect, and the least serious. The most severe is a 6. Specialized electronic 
stethoscopes are used to record both normal and abnormal sounds. 


When using a stethoscope to listen to the heart sounds, called asculation, it 
is common practice for the clinician to ask the patient to breathe deeply. 
This procedure not only allows for listening to airflow, but it may also 
amplify heart murmurs. Inhalation increases blood flow into the right side 
of the heart and may increase the amplitude of right-sided heart murmurs. 
Expiration partially restricts blood flow into the left side of the heart and 
may amplify left-sided heart murmurs. [link] indicates proper placement of 
the bell of the stethoscope to facilitate hearing the sounds. 


Stethoscope Placement for Auscultation 


Aortic valve Pulmonary valve 


Tricuspid valve Mitral valve 


Proper placement of the bell of the stethoscope 
facilitates auscultation. At each of the four locations 
on the chest, a different valve can be heard. 


Chapter Review 


The cardiac cycle comprises a complete relaxation and contraction of both 
the atria and ventricles, and lasts approximately 0.8 seconds. Beginning 
with all chambers in diastole, blood flows passively from the veins into the 
atria and past the atrioventricular valves into the ventricles. The atria begin 
to contract (atrial systole), following depolarization of the atria, and pump 
blood into the ventricles. The ventricles begin to contract (ventricular 
systole), raising pressure within the ventricles. When ventricular pressure 
rises above the pressure in the atria, blood flows toward the atria, producing 
the first heart sound, lub. As pressure in the ventricles rises above two 
major arteries, blood pushes open the two semilunar valves and moves into 


the pulmonary trunk and aorta in the ventricular ejection phase. Following 
ventricular repolarization, the ventricles begin to relax (ventricular 
diastole), and pressure within the ventricles drops. As ventricular pressure 
drops, there is a tendency for blood to flow back into the atria from the 
major arteries, closing the two semilunar valves. The second heart sound, 
dub (or dup) , occurs when the semilunar valves close. When the pressure 
falls below that of the atria, blood moves from the atria into the ventricles, 
opening the atrioventricular valves and marking one complete heart cycle. 
The valves prevent backflow of blood. Failure of the valves to operate 
properly produces turbulent blood flow within the heart; the resulting heart 
murmur can often be heard with a stethoscope. 


Review Questions 


Exercise: 


Problem: Most blood enters the ventricle during 


a. atrial systole 

b. atrial diastole 

c. ventricular systole 

d. isovolumic contraction 


Solution: 


B 
Exercise: 


Problem: 
The first heart sound represents which portion of the cardiac cycle? 


a. atrial systole 

b. ventricular systole 

c. closing of the atrioventricular valves 
d. closing of the semilunar valves 


Solution: 


C 


Exercise: 


Problem: Ventricular relaxation immediately follows 


a. atrial depolarization 
b. ventricular repolarization 
c. ventricular depolarization 
d. atrial repolarization 


Solution: 


B 


Critical Thinking Questions 


Exercise: 


Problem: 


Describe one cardiac cycle, beginning with both atria and ventricles 
relaxed. 


Solution: 


The cardiac cycle comprises a complete relaxation and contraction of 
both the atria and ventricles, and lasts approximately 0.8 seconds. 
Beginning with all chambers in diastole, blood flows passively from 
the veins into the atria and past the atrioventricular valves into the 
ventricles. The atria begin to contract following depolarization of the 
atria and pump blood into the ventricles. The ventricles begin to 
contract, raising pressure within the ventricles. When ventricular 
pressure rises above the pressure in the two major arteries, blood 


pushes open the two semilunar valves and moves into the pulmonary 
trunk and aorta in the ventricular ejection phase. Following ventricular 
repolarization, the ventricles begin to relax, and pressure within the 
ventricles drops. When the pressure falls below that of the atria, blood 
moves from the atria into the ventricles, opening the atrioventricular 
valves and marking one complete heart cycle. 


Glossary 


cardiac cycle 
period of time between the onset of atrial contraction (atrial systole) 
and ventricular relaxation (ventricular diastole) 


diastole 
period of time when the heart muscle is relaxed and the chambers fill 
with blood 


end diastolic volume (EDV) 
(also, preload) the amount of blood in the ventricles at the end of atrial 
systole just prior to ventricular contraction 


end systolic volume (ESV) 
amount of blood remaining in each ventricle following systole 


heart sounds 
sounds heard via auscultation with a stethoscope of the closing of the 
atrioventricular valves (“lub”) and semilunar valves (“dub”’) 


isovolumic contraction 
(also, isovolumetric contraction) initial phase of ventricular 
contraction in which tension and pressure in the ventricle increase, but 
no blood is pumped or ejected from the heart 


isovolumic ventricular relaxation phase 
initial phase of the ventricular diastole when pressure in the ventricles 
drops below pressure in the two major arteries, the pulmonary trunk, 
and the aorta, and blood attempts to flow back into the ventricles, 


producing the dicrotic notch of the ECG and closing the two semilunar 
valves 


murmur 
unusual heart sound detected by auscultation; typically related to septal 
or valve defects 


preload 
(also, end diastolic volume) amount of blood in the ventricles at the 
end of atrial systole just prior to ventricular contraction 


systole 
period of time when the heart muscle is contracting 


ventricular ejection phase 
second phase of ventricular systole during which blood is pumped 
from the ventricle 


Introduction to the Cardiovascular System - Blood Vessels and Circulation 
class="introduction" 
Blood Vessels 


While most 
blood 
vessels are 
located 
deep from 
the surface 
and are not 
visible, the 
superficial 
veins of the 
upper limb 
provide an 
indication 
of the 
extent, 
prominence 
, and 
importance 
of these 
structures to 
the body. 
(credit: 
Colin 
Davis) 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


e Compare and contrast the anatomical structure of arteries, arterioles, 
capillaries, venules, and veins 

e Accurately describe the forces that account for capillary exchange 

e Describe the interaction of the cardiovascular system with other body 
systems 

e Identify and describe the hepatic portal system 


In this chapter, you will learn about the vascular part of the cardiovascular 
system, that is, the vessels that transport blood throughout the body and 
provide the physical site where gases, nutrients, and other substances are 


exchanged with body cells. When vessel functioning is reduced, blood- 
borne substances do not circulate effectively throughout the body. As a 
result, tissue injury occurs, metabolism is impaired, and the functions of 
every bodily system are threatened. 


Structure and Function of Blood Vessels 
By the end of this section, you will be able to: 


e Distinguish between arteries, arterioles, capillaries, venules, and veins 
with respect to basic structure and function 


Blood is carried through the body via blood vessels. An artery is a blood 
vessel that carries blood away from the heart, where it branches into ever- 
smaller vessels. Eventually, the smallest arteries, vessels called arterioles, 
further branch into tiny capillaries, where nutrients and wastes are 
exchanged, and then combine with other vessels that exit capillaries to form 
venules, small blood vessels that carry blood to a vein, a larger blood vessel 
that returns blood to the heart. 


Arteries and veins transport blood in two distinct circuits: the systemic 
circuit and the pulmonary circuit ([link]). Systemic arteries provide blood 
rich in oxygen to the body’s tissues. The blood returned to the heart through 
systemic veins has less oxygen, since much of the oxygen carried by the 
arteries has been delivered to the cells. In contrast, in the pulmonary circuit, 
arteries carry blood low in oxygen exclusively to the lungs for gas 
exchange. Pulmonary veins then return freshly oxygenated blood from the 
lungs to the heart to be pumped back out into systemic circulation. 
Although arteries and veins differ structurally and functionally, they share 
certain features. 

Cardiovascular Circulation 


Lungs 


2c 
GO : 
5 & Pulmonary Pulmonary vein 
=) 
§3 artery 
as 
Vena cava Aorta 
Upper body 
Liver 
Hepatic vein Hepatic artery 


Hepatic portal vein 


Systemic 
circulation 


Stomach, 
intestines Hi Vessels transporting 
oxygenated blood 


Renal artery BH Vessels transporting 


Renal vein 


deoxygenated blood 


Midneye Bi Vessels involved in 


gas excange 


Lower body 


The pulmonary circuit moves blood from the right side of 
the heart to the lungs and back to the heart. The systemic 
circuit moves blood from the left side of the heart to the 
head and body and returns it to the right side of the heart to 
repeat the cycle. The arrows indicate the direction of blood 
flow, and the colors show the relative levels of oxygen 
concentration. 


Shared Structures 


Different types of blood vessels vary slightly in their structures, but they 
share the same general features. Arteries and arterioles have thicker walls 
than veins and venules because they are closer to the heart and receive 
blood that is surging at a far greater pressure ({link]). Each type of vessel 
has a lumen—a hollow passageway through which blood flows. Arteries 
have smaller lumens than veins, a characteristic that helps to maintain the 
pressure of blood moving through the system. Together, their thicker walls 


and smaller diameters give arterial lumens a more rounded appearance in 
cross section than the lumens of veins. 
Structure of Blood Vessels 


Artery Vein 


=~ 7} Tunica externa 


Baa in Tunica externa 
s im Tunica media 
Tunica intima 


Vasa vasorum 


Tunica media 

7 I Tunica intima 
vi uA 
Smooth muscle 


Internal elastic 


membrane Smooth muscle 


Vasa vasorum 
External elastic 
membrane 
Nervi vasorum 
Endothelium 
Elastic fiber 


= Endothelium 


\ 


(a) Arteries and (b) veins share the same 
general features, but the walls of arteries 
are much thicker because of the higher 
pressure of the blood that flows through 
them. (c) A micrograph shows the 
relative differences in thickness. LM x 
160. (Micrograph provided by the 
Regents of the University of Michigan 
Medical School © 2012) 


By the time blood has passed through capillaries and entered venules, the 
pressure initially exerted upon it by heart contractions has diminished. In 
other words, in comparison to arteries, venules and veins withstand a much 
lower pressure from the blood that flows through them. Their walls are 
considerably thinner and their lumens are correspondingly larger in 
diameter, allowing more blood to flow with less vessel resistance. In 
addition, many veins of the body, particularly those of the limbs, contain 
valves that assist the unidirectional flow of blood toward the heart. This is 
critical because blood flow becomes sluggish in the extremities, as a result 
of the lower pressure and the effects of gravity. 


Capillaries 


A capillary is a microscopic channel that supplies blood to the tissues 
themselves. Exchange of gases and other substances occurs in the 
capillaries between the blood and the surrounding cells and their tissue fluid 
(interstitial fluid). The diameter of a capillary lumen ranges from 5—10 
micrometers; the smallest are just barely wide enough for an erythrocyte to 
squeeze through. 


Chapter Review 


Blood pumped by the heart flows through a series of vessels known as 
arteries, arterioles, capillaries, venules, and veins before returning to the 
heart. Arteries transport blood away from the heart and branch into smaller 
vessels, forming arterioles. Arterioles distribute blood to capillary beds, the 
sites of exchange with the body tissues. Capillaries lead back to small 
vessels known as venules that flow into the larger veins and eventually back 
to the heart. 


The arterial system is a relatively high-pressure system, so arteries have 
thick walls with more elastic fibers that appear round in cross section. The 
venous system is a lower-pressure system, containing veins that have larger 
lumens and thinner walls. They often appear flattened. 


Review Questions 


Exercise: 


Problem: 


Closer to the heart, arteries would be expected to have a higher 
percentage of to help deal with the increased pressure. 


a. endothelium 

b. smooth muscle fibers 
c. elastic fibers 

d. collagenous fibers 


Solution: 
CG 
Exercise: 
Problem: Which of the following best describes veins? 


a. thick walled, small lumens, low pressure, lack valves 
b. thin walled, large lumens, low pressure, have valves 

c. thin walled, small lumens, high pressure, have valves 
d. thick walled, large lumens, high pressure, lack valves 


Solution: 


B 


Critical Thinking Questions 


Exercise: 


Problem: 


Cocaine use causes vasoconstriction. Is this likely to increase or 
decrease blood pressure, and why? 


Solution: 


Vasoconstriction causes the lumens of blood vessels to narrow. This 
increases the pressure of the blood flowing within the vessel. 


Glossary 


arteriole 
(also, resistance vessel) very small artery that leads to a capillary 


arteriovenous anastomosis 
short vessel connecting an arteriole directly to a venule and bypassing 
the capillary beds 


artery 
blood vessel that conducts blood away from the heart; may be a 
conducting or distributing vessel 


Capacitance 
ability of a vein to distend and store blood 


Capacitance vessels 
veins 


capillary 
smallest of blood vessels where physical exchange occurs between the 
blood and tissue cells surrounded by interstitial fluid 


capillary bed 
network of 10-100 capillaries connecting arterioles to venules 


continuous capillary 
most common type of capillary, found in virtually all tissues except 
epithelia and cartilage; contains very small gaps in the endothelial 
lining that permit exchange 


elastic artery 


(also, conducting artery) artery with abundant elastic fibers located 
closer to the heart, which maintains the pressure gradient and conducts 
blood to smaller branches 


external elastic membrane 
membrane composed of elastic fibers that separates the tunica media 
from the tunica externa; seen in larger arteries 


fenestrated capillary 
type of capillary with pores or fenestrations in the endothelium that 
allow for rapid passage of certain small materials 


internal elastic membrane 
membrane composed of elastic fibers that separates the tunica intima 
from the tunica media; seen in larger arteries 


lumen 
interior of a tubular structure such as a blood vessel or a portion of the 
alimentary canal through which blood, chyme, or other substances 
travel 


metarteriole 
short vessel arising from a terminal arteriole that branches to supply a 
capillary bed 


microcirculation 
blood flow through the capillaries 


muscular artery 
(also, distributing artery) artery with abundant smooth muscle in the 
tunica media that branches to distribute blood to the arteriole network 


nervi vasorum 
small nerve fibers found in arteries and veins that trigger contraction of 
the smooth muscle in their walls 


perfusion 
distribution of blood into the capillaries so the tissues can be supplied 


precapillary sphincters 
circular rings of smooth muscle that surround the entrance to a 
capillary and regulate blood flow into that capillary 


sinusoid capillary 
rarest type of capillary, which has extremely large intercellular gaps in 
the basement membrane in addition to clefts and fenestrations; found 
in areas such as the bone marrow and liver where passage of large 
molecules occurs 


thoroughfare channel 
continuation of the metarteriole that enables blood to bypass a 
capillary bed and flow directly into a venule, creating a vascular shunt 


tunica externa 
(also, tunica adventitia) outermost layer or tunic of a vessel (except 
capillaries) 


tunica intima 
(also, tunica interna) innermost lining or tunic of a vessel 


tunica media 
middle layer or tunic of a vessel (except capillaries) 


vasa vasorum 
small blood vessels located within the walls or tunics of larger vessels 
that supply nourishment to and remove wastes from the cells of the 
vessels 


vascular shunt 
continuation of the metarteriole and thoroughfare channel that allows 
blood to bypass the capillary beds to flow directly from the arterial to 
the venous circulation 


vasoconstriction 
constriction of the smooth muscle of a blood vessel, resulting in a 
decreased vascular diameter 


vasodilation 
relaxation of the smooth muscle in the wall of a blood vessel, resulting 
in an increased vascular diameter 


vasomotion 
irregular, pulsating flow of blood through capillaries and related 
structures 


vein 
blood vessel that conducts blood toward the heart 


venous reserve 
volume of blood contained within systemic veins in the integument, 
bone marrow, and liver that can be returned to the heart for circulation, 
if needed 


venule 
small vessel leading from the capillaries to veins 


Introduction to the Respiratory System 
class="introduction" 
Mountain Climbers 


The thin air at high 
elevations can strain the 
human respiratory system. 
(credit: 
“bortescristian”/flickr.com 


) 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


e List the structures of the respiratory system 

e List the major functions of the respiratory system 

e Outline the forces that allow for air movement into and out of the 
lungs 

e Outline the process of gas exchange 

e Summarize the process of oxygen and carbon dioxide transport within 
the respiratory system 

e Discuss how the respiratory system responds to exercise 


Hold your breath. Really! See how long you can hold your breath as you 
continue reading...How long can you do it? Chances are you are feeling 
uncomfortable already. A typical human cannot survive without breathing 
for more than 3 minutes, and even if you wanted to hold your breath longer, 
your autonomic nervous system would take control. This is because every 
cell in the body needs to run the oxidative stages of cellular respiration, the 
process by which energy is produced in the form of adenosine triphosphate 
(ATP). For oxidative phosphorylation to occur, oxygen is used as a reactant 
and carbon dioxide is released as a waste product. You may be surprised to 
learn that although oxygen is a critical need for cells, it is actually the 
accumulation of carbon dioxide that primarily drives your need to breathe. 
Carbon dioxide is exhaled and oxygen is inhaled through the respiratory 
system, which includes muscles to move air into and out of the lungs, 
passageways through which air moves, and microscopic gas exchange 
surfaces covered by capillaries. The circulatory system transports gases 
from the lungs to tissues throughout the body and vice versa. A variety of 
diseases can affect the respiratory system, such as asthma, emphysema, 
chronic obstruction pulmonary disorder (COPD), and lung cancer. All of 
these conditions affect the gas exchange process and result in labored 
breathing and other difficulties. 


Organs and Structures of the Respiratory System 
By the end of this section, you will be able to: 


e List the structures that make up the respiratory system 

e Describe how the respiratory system processes oxygen and CO» 

e Compare and contrast the functions of upper respiratory tract with the 
lower respiratory tract 


The major organs of the respiratory system function primarily to provide 
oxygen to body tissues for cellular respiration, remove the waste product 
carbon dioxide, and help to maintain acid-base balance. Portions of the 
respiratory system are also used for non-vital functions, such as sensing 
odors, speech production, and coughing ([link]). 

Major Respiratory Structures 


Nasal cavity 
Nostril 


Oral cavit 
: Pharynx 


Larynx 


Trachea 


Left main 
bronchus 


Right main 
bronchus 


Right lun 
? 3 Left lung 


Diaphragm 


The major respiratory structures span the nasal 
cavity to the diaphragm. 


The Nose and its Adjacent Structures 


The major entrance and exit for the respiratory system is through the nose, 
via the nostrils. The inhaled air enters into the nasal cavity, which is 
separated into left and right sections by the nasal septum. The wall of the 
nasal cavity has three bony projections, called the superior, middle, and 
inferior nasal conchae. Conchae serve to increase the surface area of the 
nasal cavity and to disrupt the flow of air as it enters the nose, causing air to 
bounce along the epithelium, where it is filtered, warmed, and humidified. 
Air exits the nasal cavities and moves into the pharynx. 


Several bones that help form the walls of the nasal cavity have air- 
containing spaces called the sinuses, which serve to warm and humidify 
incoming air. Sinuses are lined with a mucosa. Each sinus is named for its 
associated bone: frontal sinus, maxillary sinus, sphenoidal sinus, and 
ethmoidal sinus. The sinuses produce mucus and lighten the weight of the 
skull. 


Portions of the nasal cavities are lined with mucous membranes, containing 
sebaceous glands and hair follicles that serve to prevent the passage of large 
debris, such as dirt, through the nasal cavity. 


The conchae and sinuses are lined by respiratory epithelium composed of 
pseudostratified ciliated columnar epithelium ([link]). The epithelium 
contains goblet cells, one of the specialized, columnar epithelial cells that 
produce mucus to trap debris. The cilia of the respiratory epithelium help 
remove the mucus and debris from the nasal cavity with a constant beating 
motion, sweeping materials towards the throat to be swallowed. 
Interestingly, cold air slows the movement of the cilia, resulting in 
accumulation of mucus that may in turn lead to a runny nose during cold 
weather. This moist epithelium functions to warm and humidify incoming 
air. Capillaries located just beneath the nasal epithelium warm the incoming 
air. 

Pseudostratified Ciliated Columnar Epithelium 


Lumen of 
Goblet cell trachea Cilia 


Pseudostratified 
columnar epithelia 


Seromucous gland 
in submucosa 


Respiratory epithelium is pseudostratified ciliated 
columnar epithelium. Seromucous glands provide 
lubricating mucus. LM x 680. (Micrograph provided by 
the Regents of University of Michigan Medical School © 
2012) 


Pharynx 


The pharynx is a tube formed by skeletal muscle and lined by mucous 
membrane that is continuous with that of the nasal cavities. The pharynx is 
divided into three major regions: the nasopharynx, the oropharynx, and the 
laryngopharynx ([Link]). 

Divisions of the Pharynx 


Nasal cavity 


Hard palate Soft palate 


Tongue 


Epiglottis 


Larynx (voice box) 


Esophagus 


Trachea 


The pharynx is divided into three regions: the 
nasopharynx, the oropharynx, and the 
laryngopharynx. 


The nasopharynx is flanked by the conchae of the nasal cavity, and it 
serves only as an airway. At the top of the nasopharynx are the pharyngeal 
tonsils. A pharyngeal tonsil, also called an adenoid, is a collection of tissue 
similar to a lymph node that lies at the top portion of the nasopharynx. The 
function of the pharyngeal tonsil is not well understood, but it contains a 
rich supply of lymphocytes (a type of WBC) and is covered with ciliated 
epithelium that traps and destroys invading pathogens that enter during 
inhalation. The pharyngeal tonsils are large in children, but interestingly, 
tend to regress with age and may even disappear. The uvula is a small 
bulbous, teardrop-shaped structure located at the apex of the soft palate. 
Both the uvula and soft palate move like a pendulum during swallowing, 
swinging upward to close off the nasopharynx to prevent ingested materials 
from entering the nasal cavity. In addition, auditory (Eustachian) tubes that 


connect to each middle ear cavity open into the nasopharynx. This 
connection is why colds often lead to ear infections. 


The oropharynx is a passageway for both air and food. It contains two 
distinct sets of tonsils, the palatine and lingual tonsils. Similar to the 
pharyngeal tonsil, the palatine and lingual tonsils are composed of 
lymphoid tissue, and trap and destroy pathogens entering the body through 
the oral or nasal cavities. 


The laryngopharynx continues the route for ingested material and air until 
its inferior end, where the digestive and respiratory systems split. To the 
front,the laryngopharynx opens into the larynx, whereas to the back, it 
enters the esophagus. 


Larynx 


The larynx is a structure below the laryngopharynx that connects the 
pharynx to the trachea and helps regulate the volume of air that enters and 
leaves the lungs ({link]). The structure of the larynx is formed by several 
pieces of cartilage. 

Larynx 


Epiglottis 
Body of hyoid bone 
Thyrohyoid membrane 
Thyroid cartilage 


Laryngeal prominence 


Cricothyroid ligament 
Y q Cricoid cartilage 
Cricotracheal ligament 


Tracheal cartilages 


Epiglottis 
Thyrohyoid membrane 
Body of hyoid bone 
Fatty pad 

Thyrohyoid membrane 


Vestibular fold 
Vocal fold 


Thyroid cartilage 
Cricothyroid ligament 


Cuneiform cartilage 
Corniculate cartilage 


Arytenoid cartilage 


Cricoid cartilage 
Cricotracheal ligament 


Tracheal cartilages 


Right lateral view 


The larynx extends from the laryngopharynx and 
the hyoid bone to the trachea. 


The epiglottis, attached to the thyroid cartilage, is a very flexible piece of 
elastic cartilage that covers the opening of the trachea (see [link]). When in 
the “closed” position, the unattached end of the epiglottis rests on the 
glottis. The glottis is composed of the vestibular folds, the true vocal cords, 
and the space between these folds ([link]). The inner edges of the true vocal 
cords are free, allowing oscillation to produce sound. The size of the 
membranous folds of the true vocal cords differs between individuals, 
producing voices with different pitch ranges. Folds in males tend to be 
larger than those in females, which create a deeper voice. The act of 
swallowing causes the pharynx and larynx to lift upward, allowing the 
pharynx to expand and the epiglottis of the larynx to swing downward, 
closing the opening to the trachea. These movements produce a larger area 


for food to pass through, while preventing food and beverages from 
entering the trachea. 
Vocal Cords 


Esophagus Pyriform fossa 


Trachea 
True vocal cord 


Vestibular fold 
Glottis 


Epiglottis 


Tongue 


The true vocal cords and vestibular folds of the 
larynx are viewed looking down from the 
laryngopharynx. 


Trachea 


The trachea (windpipe) extends from the larynx toward the lungs ([link]a). 
The trachea is formed by 16 to 20 stacked pieces of cartilage that are 
connected by connective tissue. The fibroelastic membrane of the trachea 
allows it to stretch and expand slightly during inhalation and exhalation, 
whereas the rings of cartilage provide structural support and prevent the 
trachea from collapsing. 

Trachea 


(a) The tracheal tube is formed by stacked, C-shaped pieces of hyaline 
cartilage. (b) The layer visible in this cross-section of tracheal wall 
tissue between the hyaline cartilage and the lumen of the trachea is the 
mucosa, which is composed of pseudostratified ciliated columnar 


epithelium that contains goblet cells. LM x 1220. (Micrograph 
provided by the Regents of University of Michigan Medical School © 
2012) 


Larynx 


Trachea 


cartilages 


Submucosal Pseudostratified 
seromucous glands columnar epithelia Cilia =©Lumen 


Primary 
bronchi 


Right lung Left lung Hyaline cartilage 


Secondary 
bronchi 


(a) (b) 


Bronchi and Bronchioles 


The right and left primary bronchi branch off the trachea towards the right 
and left lungs. The primary bronchi further branch into the secondary and 
tertiary bronchi. A bronchiole branches from the tertiary bronchi. 
Bronchioles, which are about 1 mm in diameter, further branch until they 
become the tiny terminal bronchioles, which lead to the structures of gas 
exchange. There are more than 1000 terminal bronchioles in each lung. The 
muscular walls of the bronchioles do not contain cartilage like those of the 
bronchi. However, smooth muscle can change the size of the tubing to 
increase or decrease airflow through it. 


Respiratory Gas Exchange 


The respiratory zone includes structures that are directly involved in gas 
exchange. The respiratory zone begins where the terminal bronchioles join 
a respiratory bronchiole, the smallest type of bronchiole ({link]), which 
then leads to an alveolar duct, opening into a cluster of alveoli. 
Respiratory Zone 


Terminal bronchiole 


Smooth muscle 
Deoxygenated blood from 
pulmonary artery 


Oxygenated blood to 
pulmonary vein 


Respiratory bronchiole 


Alveolar Alveolus 


sac 


Capillaries 


Alveolar 
pores 


Bronchioles lead to alveolar sacs in the respiratory zone, 
where gas exchange occurs. 


Alveoli 


An alveolar sac is a cluster of many individual alveoli that are responsible 
for gas exchange. An alveolus is approximately 200 tm in diameter with 
elastic walls that allow the alveolus to stretch during air intake, which 


greatly increases the surface area available for gas exchange. Alveoli are 
connected to their neighbors by alveolar pores, which help maintain equal 
air pressure throughout the alveoli and lung ([link]). 

Structures of the Respiratory Zone 


(a) The alveolus is responsible for gas exchange. (b) A micrograph 
shows the alveolar structures within lung tissue. LM x 178. 
(Micrograph provided by the Regents of University of Michigan 
Medical School © 2012) 


Alveoli Alveolar duct Blood vessels Lumen of bronchiole 


Ne, Wee 


a re t 
+> Alveolar pores f eo cae Lg 
| mgr 
Capillary 7 See Leal 
Respiratory membrane Gx 2 = 
Type | alveolar cell ie vhs E oe 
\ fs 
Macrophage 
Alveolus 
(gas-filled space) 
Type II alveolar cell Alveolar sac 
(a) (b) 
Note: 


Diseases of the... 

Respiratory System Disorder: Asthma 

Asthma is common condition that affects the lungs in both adults and 
children. Approximately 8.2 percent of adults (18.7 million) and 9.4 
percent of children (7 million) in the United States suffer from asthma. In 
addition, asthma is the most frequent cause of hospitalization in children. 
Asthma is a chronic disease characterized by inflammation and fluid 
accumulation of the airway, and bronchospasms (that is, constriction of the 
bronchioles), which can inhibit air from entering the lungs. In addition, 


excessive mucus secretion can occur, which further contributes to blockage 
of the airway. 

Bronchospasms occur periodically and lead to an “asthma attack.” An 
attack may be triggered by environmental factors such as dust, pollen, pet 
hair, or dander, changes in the weather, mold, tobacco smoke, and 
respiratory infections, or by exercise and stress. 

Symptoms of an asthma attack involve coughing, shortness of breath, 
wheezing, and tightness of the chest. Symptoms of a severe asthma attack 
that requires immediate medical attention would include difficulty 
breathing that results in blue (cyanotic) lips or face, confusion, drowsiness, 
a rapid pulse, sweating, and severe anxiety. The severity of the condition, 
frequency of attacks, and identified triggers influence the type of 
medication that an individual may require. Longer-term treatments are 
used for those with more severe asthma. Short-term, fast-acting drugs that 
are used to treat an asthma attack are typically administered via an inhaler. 
For young children or individuals who have difficulty using an inhaler, 
asthma medications can be administered via a nebulizer. 


Interactive Link Questions 


Exercise: 


Problem: 


Visit this site to learn more about what happens during an asthma 
attack. What are the three changes that occur inside the airways during 
an asthma attack? 


Solution: 
Inflammation and the production of a thick mucus; constriction of the 


airway muscles, or bronchospasm; and an increased sensitivity to 
allergens. 


Review Questions 


Exercise: 


Problem: 


Which of the following anatomical structures is at the site of 
respiratory gas exchange? 


a. pharynx 

b. nasal cavity 
c. alveoli 

d. bronchi 


Solution: 


C 


Exercise: 


Problem: What is the function of the conchae in the nasal cavity? 


a. increase surface area 

b. exchange gases 

c. maintain surface tension 
d. maintain air pressure 


Solution: 


A 


Exercise: 


Problem: Which of the following are structural features of the trachea? 


a. C-shaped cartilage 

b. smooth muscle fibers 
c. cilia 

d. all of the above 


Solution: 


A 


Critical Thinking Questions 


Exercise: 


Problem: 


If a person sustains an injury to the epiglottis, what would be the 
physiological result? 


Solution: 


The epiglottis is a region of the larynx that is important during the 
swallowing of food or drink. As a person swallows, the pharynx moves 
upward and the epiglottis closes over the trachea, preventing food or 
drink from entering the trachea. If a person’s epiglottis were injured, 
this mechanism would be impaired. As a result, the person may have 
problems with food or drink entering the trachea, and possibly, the 
lungs. Over time, this may cause infections such as pneumonia to set 
in. 


References 


Bizzintino J, Lee WM, Laing IA, Vang F, Pappas T, Zhang G, Martin AC, 
Khoo SK, Cox DW, Geelhoed GC, et al. Association between human 
rhinovirus C and severity of acute asthma in children. Eur Respir J 
[Internet]. 2010 [cited 2013 Mar 22]; 37(5):1037—1042. Available from: 


submit=Go&gca=erj%3B37%2F5%2F 1037 &allch= 


Kumar V, Ramzi S, Robbins SL. Robbins Basic Pathology. 7th ed. 
Philadelphia (PA): Elsevier Ltd; 2005. 


Martin RJ, Kraft M, Chu HW, Berns, EA, Cassell GH. A link between 
chronic asthma and chronic infection. J Allergy Clin Immunol [Internet]. 
2001 [cited 2013 Mar 22]; 107(4):595-601. Available from: 


submit=Go&gca=erj%3B37%2F5%2F1037&allch= 


Glossary 


ala 
(plural = alae) small, flaring structure of a nostril that forms the lateral 
side of the nares 


alar cartilage 
cartilage that supports the apex of the nose and helps shape the nares; 
it is connected to the septal cartilage and connective tissue of the alae 


alveolar duct 
small tube that leads from the terminal bronchiole to the respiratory 
bronchiole and is the point of attachment for alveoli 


alveolar macrophage 
immune system cell of the alveolus that removes debris and pathogens 


alveolar pore 
opening that allows airflow between neighboring alveoli 


alveolar sac 
cluster of alveoli 


alveolus 
small, grape-like sac that performs gas exchange in the lungs 


apex 
tip of the external nose 


bronchial tree 
collective name for the multiple branches of the bronchi and 
bronchioles of the respiratory system 


bridge 
portion of the external nose that lies in the area of the nasal bones 


bronchiole 
branch of bronchi that are 1 mm or less in diameter and terminate at 
alveolar sacs 


bronchus 
tube connected to the trachea that branches into many subsidiaries and 
provides a passageway for air to enter and leave the lungs 


conducting zone 
region of the respiratory system that includes the organs and structures 
that provide passageways for air and are not directly involved in gas 
exchange 


cricoid cartilage 
portion of the larynx composed of a ring of cartilage with a wide 
posterior region and a thinner anterior region; attached to the 
esophagus 


dorsum nasi 
intermediate portion of the external nose that connects the bridge to the 
apex and is supported by the nasal bone 


epiglottis 
leaf-shaped piece of elastic cartilage that is a portion of the larynx that 
swings to close the trachea during swallowing 


external nose 
region of the nose that is easily visible to others 


fauces 
portion of the posterior oral cavity that connects the oral cavity to the 
oropharynx 


fibroelastic membrane 


specialized membrane that connects the ends of the C-shape cartilage 
in the trachea; contains smooth muscle fibers 


glottis 
opening between the vocal folds through which air passes when 
producing speech 


laryngeal prominence 
region where the two lamina of the thyroid cartilage join, forming a 
protrusion known as “Adam’s apple” 


laryngopharynx 
portion of the pharynx bordered by the oropharynx superiorly and 
esophagus and trachea inferiorly; serves as a route for both air and 
food 


larynx 
cartilaginous structure that produces the voice, prevents food and 
beverages from entering the trachea, and regulates the volume of air 
that enters and leaves the lungs 


lingual tonsil 
lymphoid tissue located at the base of the tongue 


meatus 
one of three recesses (superior, middle, and inferior) in the nasal cavity 
attached to the conchae that increase the surface area of the nasal 
cavity 


naris 
(plural = nares) opening of the nostrils 


nasal bone 
bone of the skull that lies under the root and bridge of the nose and is 
connected to the frontal and maxillary bones 


nasal septum 


wall composed of bone and cartilage that separates the left and right 
nasal cavities 


nasopharynx 
portion of the pharynx flanked by the conchae and oropharynx that 
serves as an airway 


oropharynx 
portion of the pharynx flanked by the nasopharynx, oral cavity, and 
laryngopharynx that is a passageway for both air and food 


palatine tonsil 
one of the paired structures composed of lymphoid tissue located 
anterior to the uvula at the roof of isthmus of the fauces 


paranasal sinus 
one of the cavities within the skull that is connected to the conchae that 
serve to warm and humidify incoming air, produce mucus, and lighten 
the weight of the skull; consists of frontal, maxillary, sphenoidal, and 
ethmoidal sinuses 


pharyngeal tonsil 
structure composed of lymphoid tissue located in the nasopharynx 


pharynx 
region of the conducting zone that forms a tube of skeletal muscle 
lined with respiratory epithelium; located between the nasal conchae 
and the esophagus and trachea 


philtrum 
concave surface of the face that connects the apex of the nose to the 
top lip 

pulmonary surfactant 
substance composed of phospholipids and proteins that reduces the 


surface tension of the alveoli; made by type II alveolar cells 


respiratory bronchiole 


specific type of bronchiole that leads to alveolar sacs 


respiratory epithelium 
ciliated lining of much of the conducting zone that is specialized to 
remove debris and pathogens, and produce mucus 


respiratory membrane 
alveolar and capillary wall together, which form an air-blood barrier 
that facilitates the simple diffusion of gases 


respiratory zone 
includes structures of the respiratory system that are directly involved 
in gas exchange 


root 
region of the external nose between the eyebrows 


thyroid cartilage 
largest piece of cartilage that makes up the larynx and consists of two 
lamina 


trachea 
tube composed of cartilaginous rings and supporting tissue that 
connects the lung bronchi and the larynx; provides a route for air to 
enter and exit the lung 


trachealis muscle 
smooth muscle located in the fibroelastic membrane of the trachea 


true vocal cord 
one of the pair of folded, white membranes that have a free inner edge 
that oscillates as air passes through to produce sound 


type I alveolar cell 
squamous epithelial cells that are the major cell type in the alveolar 
wall; highly permeable to gases 


type II alveolar cell 


cuboidal epithelial cells that are the minor cell type in the alveolar 
wall; secrete pulmonary surfactant 


vestibular fold 
part of the folded region of the glottis composed of mucous membrane; 
supports the epiglottis during swallowing 


Gas Pressure, Volume, and Breathing 
By the end of this section, you will be able to: 


e Describe the mechanisms that drive breathing 

e Discuss how pressure and volume are related 

e List the steps involved in breather 

e Discuss the physical factors related to breathing 

e Discuss factors that can influence the respiratory rate 


Breathing can be described as the movement of air into 
(inspiration/inhalation) and out of the lungs (expiration/exhalation). The 
major mechanism that drive breathing is differences between atmospheric 
pressure and the air pressure within the lungs. 


Relationship Between Pressure and Volume 


Inspiration (or inhalation) and expiration (or exhalation) are dependent on 
the differences in pressure between the atmosphere and the lungs. In a gas, 
pressure is a force created by the movement of gas molecules that are 
confined. For example, a certain number of gas molecules in a two-liter 
container has more room than the same number of gas molecules in a one- 
liter container ({link]). In this case, the force exerted by the movement of 
the gas molecules against the walls of the two-liter container is lower than 
the force exerted by the gas molecules in the one-liter container. Therefore, 
the pressure is lower in the two-liter container and higher in the one-liter 
container. At a constant temperature, changing the volume occupied by the 
gas changes the pressure, as does changing the number of gas molecules. 
Boyle’s law describes the relationship between volume and pressure in a 
gas at a constant temperature. Boyle discovered that the pressure of a gas is 
inversely proportional to its volume: If volume increases, pressure 
decreases. Likewise, if volume decreases, pressure increases. Pressure and 
volume are inversely related (P = k/V). Therefore, the pressure in the one- 
liter container (one-half the volume of the two-liter container) would be 
twice the pressure in the two-liter container. Boyle’s law is expressed by the 
following formula: 

Equation: 


PV, = PoV2 


In this formula, P; represents the initial pressure and V, represents the 
initial volume, whereas the final pressure and volume are represented by P> 
and V> respectively. If the two- and one-liter containers were connected by 
a tube and the volume of one of the containers were changed, then the gases 
would move from higher pressure (lower volume) to lower pressure (higher 
volume). 

Boyle's Law 


In a gas, pressure increases as volume 
decreases. 


Atmospheric pressure is the amount of force that is exerted by gases in the 
air surrounding any given surface, such as the body. Atmospheric pressure 
can be expressed in millimeters of mercury (mm Hg), which is similar to 


the phrase "inches of mercury" used to describe atmospheric pressure on 
weather reports. 760 mm Hg is the atmospheric pressure at sea level under 
highly specific parameters of latitude and temperature. 


How Changes in Volume and Pressure are Accomplished During 
Breathing 


In addition to the differences in pressures, breathing is also dependent upon 
the contraction and relaxation of muscle fibers of both the diaphragm and 
thorax. The lungs themselves are passive during breathing, meaning they 
are not involved in creating the movement that helps inspiration and 
expiration. Contraction and relaxation of the diaphragm and intercostal 
muscles (found between the ribs) cause most of the pressure changes that 
result in inspiration and expiration. These muscle movements and 
subsequent pressure changes cause air to either rush in or be forced out of 
the lungs. 


During inspiration, the diaphragm and external intercostal muscles contract, 
causing the rib cage to expand and move outward, and expanding the 
thoracic cavity and lung volume. This creates a lower pressure within the 
lung than that of the atmosphere, causing air to be drawn into the lungs. 
During expiration, the diaphragm and intercostals relax, causing the thorax 
and lungs to recoil. The air pressure within the lungs increases to above the 
pressure of the atmosphere, causing air to be forced out of the lungs. 


Respiratory Rate 


Breathing usually occurs without thought, although at times you can 
consciously control it, such as when you swim under water, sing a song, or 
blow bubbles. The respiratory rate is the total number of breaths, or 
respiratory cycles, that occur each minute. Respiratory rate can be an 
important indicator of disease, as the rate may increase or decrease during 
an illness or in a disease condition. The respiratory rate is controlled by the 
respiratory center located within the brain, which responds primarily to 
changes in carbon dioxide, oxygen, and pH levels in the blood. 


The normal respiratory rate of a child decreases from birth to adolescence. 
A child under 1 year of age has a normal respiratory rate between 30 and 60 
breaths per minute, but by the time a child is about 10 years old, the normal 
rate is closer to 18 to 30. By adolescence, the normal respiratory rate is 
similar to that of adults, 12 to 18 breaths per minute. 


Chapter Review 


The process of breathing is driven by pressure differences between the 
lungs and the atmosphere. Atmospheric pressure is the force exerted by 
gases present in the atmosphere. Pressure is determined by the volume of 
the space occupied by a gas. Air flows when a pressure gradient is created, 
from a space of higher pressure to a space of lower pressure. Boyle’s law 
describes the relationship between volume and pressure. A gas is at lower 
pressure in a larger volume because the gas molecules have more space to 
in which to move. The same quantity of gas in a smaller volume results in 
gas molecules crowding together, producing increased pressure. 


Pulmonary ventilation consists of the process of inspiration (or inhalation), 
where air enters the lungs, and expiration (or exhalation), where air leaves 
the lungs. During inspiration, the diaphragm and external intercostal 
muscles contract, causing the rib cage to expand and move outward, and 
expanding the thoracic cavity and lung volume. This creates a lower 
pressure within the lung than that of the atmosphere, causing air to be 
drawn into the lungs. During expiration, the diaphragm and intercostals 
relax, causing the thorax and lungs to recoil. The air pressure within the 
lungs increases to above the pressure of the atmosphere, causing air to be 
forced out of the lungs. 


Both respiratory rate and depth are controlled by the respiratory centers of 
the brain, which are stimulated by factors such as chemical and pH changes 
in the blood. A rise in carbon dioxide or a decline in oxygen levels in the 
blood stimulates an increase in respiratory rate and depth. 


Review Questions 


Exercise: 


Problem: What are the units for measuring air pressure? 


a. mm Hg 
b. mm O2 
c. Percent Hg 
d. Percent O2 


Solution: 


A 


Exercise: 


Problem:A decrease in volume leads to a(n) pressure. 


a. decrease in 

b. equalization of 
c. increase in 

d. zero 


Solution: 


C 
Exercise: 
Problem: 


Contraction of the external intercostal muscles causes which of the 
following to occur? 


a. The diaphragm moves downward. 

b. The rib cage is compressed. 

c. The thoracic cavity volume decreases. 
d. The ribs and sternum move upward. 


Solution: 


D 


Critical Thinking Questions 


Exercise: 


Problem: Outline the steps involved in quiet breathing. 
Solution: 


Quiet breathing occurs at rest and without active thought. During quiet 
breathing, the diaphragm and external intercostal muscles work at 
different extents, depending on the situation. For inspiration, the 
diaphragm contracts, causing the diaphragm to flatten and drop 
towards the abdominal cavity, helping to expand the thoracic cavity. 
The external intercostal muscles contract as well, causing the rib cage 
to expand, and the rib cage and sternum to move outward, also 
expanding the thoracic cavity. Expansion of the thoracic cavity also 
causes the lungs to expand. As a result, the pressure within the lungs 
drops below that of the atmosphere, causing air to rush into the lungs. 
In contrast, expiration is a passive process. As the diaphragm and 
intercostal muscles relax, the lungs and thoracic tissues recoil, and the 
volume of the lungs decreases. This causes the pressure within the 
lungs to increase above that of the atmosphere, causing air to leave the 
lungs. 


Exercise: 
Problem: What is respiratory rate and how is it controlled? 
Solution: 
Respiratory rate is defined as the number of breaths taken per minute. 


Respiratory rate is controlled by the respiratory center, located in the 
brain. Conscious thought can alter the normal respiratory rate through 


control by skeletal muscle, although one cannot consciously stop the 
rate altogether. A typical resting respiratory rate is about 14 breaths per 
minute. 


Glossary 


alveolar dead space 
air space within alveoli that are unable to participate in gas exchange 


anatomical dead space 
air space present in the airway that never reaches the alveoli and 
therefore never participates in gas exchange 


apneustic center 
network of neurons within the pons that stimulate the neurons in the 
dorsal respiratory group; controls the depth of inspiration 


atmospheric pressure 
amount of force that is exerted by gases in the air surrounding any 
given surface 


Boyle’s law 
relationship between volume and pressure as described by the formula: 
PV Lovo 


central chemoreceptor 
one of the specialized receptors that are located in the brain that sense 
changes in hydrogen ion, oxygen, or carbon dioxide concentrations in 
the brain 


dorsal respiratory group (DRG) 
region of the medulla oblongata that stimulates the contraction of the 
diaphragm and intercostal muscles to induce inspiration 


expiration 
(also, exhalation) process that causes the air to leave the lungs 


expiratory reserve volume (ERV) 
amount of air that can be forcefully exhaled after a normal tidal 
exhalation 


forced breathing 
(also, hyperpnea) mode of breathing that occurs during exercise or by 
active thought that requires muscle contraction for both inspiration and 
expiration 


functional residual capacity (FRC) 
sum of ERV and RV, which is the amount of air that remains in the 
lungs after a tidal expiration 


inspiration 
(also, inhalation) process that causes air to enter the lungs 


inspiratory capacity (IC) 
sum of the TV and IRV, which is the amount of air that can maximally 
be inhaled past a tidal expiration 


inspiratory reserve volume (IRV) 
amount of air that enters the lungs due to deep inhalation past the tidal 
volume 


intra-alveolar pressure 
(intrapulmonary pressure) pressure of the air within the alveoli 


intrapleural pressure 
pressure of the air within the pleural cavity 


peripheral chemoreceptor 
one of the specialized receptors located in the aortic arch and carotid 
arteries that sense changes in pH, carbon dioxide, or oxygen blood 
levels 


pneumotaxic center 
network of neurons within the pons that inhibit the activity of the 
neurons in the dorsal respiratory group; controls rate of breathing 


pulmonary ventilation 
exchange of gases between the lungs and the atmosphere; breathing 


quiet breathing 
(also, eupnea) mode of breathing that occurs at rest and does not 
require the cognitive thought of the individual 


residual volume (RV) 
amount of air that remains in the lungs after maximum exhalation 


respiratory cycle 
one sequence of inspiration and expiration 


respiratory rate 
total number of breaths taken each minute 


respiratory volume 
varying amounts of air within the lung at a given time 


thoracic wall compliance 
ability of the thoracic wall to stretch while under pressure 


tidal volume (TV) 
amount of air that normally enters the lungs during quiet breathing 


total dead space 
sum of the anatomical dead space and alveolar dead space 


total lung capacity (TLC) 
total amount of air that can be held in the lungs; sum of TV, ERV, IRV, 
and RV 


transpulmonary pressure 
pressure difference between the intrapleural and intra-alveolar 
pressures 


ventral respiratory group (VRG) 
region of the medulla oblongata that stimulates the contraction of the 
accessory muscles involved in respiration to induce forced inspiration 


and expiration 


vital capacity (VC) 
sum of TV, ERV, and IRV, which is all the volumes that participate in 
gas exchange 


Gas Exchange 
By the end of this section, you will be able to: 


e Compare the composition of atmospheric air 

e Describe the mechanisms that drive gas exchange 
e Discuss the process of external respiration 

e Describe the process of internal respiration 


The purpose of the respiratory system is to perform gas exchange. Inhaling 
provides air to the alveoli for this gas exchange process. At the respiratory 
membrane, where the alveolar and capillary walls meet, gases move across 
the membranes, with oxygen entering the bloodstream and carbon dioxide 
exiting. It is through this mechanism that blood is oxygenated and carbon 
dioxide, the waste product of cellular respiration, is removed from the body 
via exhaling. 


Gas Exchange 


In order to understand the mechanisms of gas exchange in the lung, it is 
important to understand the underlying principles of gases and their 
behavior. In addition to Boyle’s law, several other gas laws help to describe 
the behavior of gases. 


Gas Laws and Air Composition 


Gas molecules exert force on the surfaces with which they are in contact; 
this force is called pressure. In natural systems, gases are normally present 
as a mixture of different types of molecules. For example, the atmosphere 
consists of oxygen, nitrogen, carbon dioxide, and other gaseous molecules, 
and this gaseous mixture exerts a certain pressure referred to as atmospheric 
pressure ([link]). Partial pressure (P,) is the pressure of a single type of 
gas in a mixture of gases. For example, in the atmosphere, oxygen exerts a 
partial pressure, and nitrogen exerts another partial pressure, independent of 
the partial pressure of oxygen ([link]). Total pressure is the sum of all the 
partial pressures of a gaseous mixture. 


Partial Pressures of Atmospheric Gases 


Percent of total 


Gas composition 
Nitrogen (N>) 78.6 
Oxygen (O>) 20.9 

Water (H»O) 0.04 

Carbon dioxide (CO>) 0.004 

Others 0.0006 


Total composition/total 


100% 
atmospheric pressure 


Partial 
pressure 
(mm Hg) 
597.4 
158.8 

3.0 

0.3 


0.5 


760.0 


The partial pressure values are obtained by multiplying by the decimal form 
of the percentage (e.g. 0.784) and atmospheric pressure (760 mm Hg). For 
example, the partial pressure of oxygen is 0.209 x 760 = 158.8 mm Hg. 


Partial and Total Pressures of a Gas 


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oa. * yd a . 4 eat XO. se 
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Oxygen Nitrogen Oxygen + Nitrogen 


Pressure Pressure Pressure 
159 mm Hg 593 mm Hg 752 mm Hg 


Partial pressure is the force exerted by a gas. 
The sum of the partial pressures of all the 
gases in a mixture equals the total pressure. 


Partial pressure is extremely important in predicting the movement of gases. 
Recall that gases tend to equalize their pressure in two regions that are 
connected. A gas will move from an area where its partial pressure is higher 
to an area where its partial pressure is lower. In addition, the greater the 
partial pressure difference between the two areas, the more rapid is the 
movement of gases. 


Solubility of Gases in Liquids 


Henry’s law describes the behavior of gases when they come into contact 
with a liquid, such as blood. Henry’s law states that the concentration of gas 
in a liquid is directly proportional to the solubility and partial pressure of 
that gas. The greater the partial pressure of the gas, the greater the number 
of gas molecules that will dissolve in the liquid. The concentration of the 
gas in a liquid is also dependent on the solubility of the gas in the liquid. 
For example, although nitrogen is present in the atmosphere, very little 
nitrogen dissolves into the blood, because the solubility of nitrogen in blood 
is very low. The exception to this occurs in scuba divers; the composition of 
the compressed air that divers breathe causes nitrogen to have a higher 
partial pressure than normal, causing it to dissolve in the blood in greater 
amounts than normal. Too much nitrogen in the bloodstream results in a 
serious condition that can be fatal if not corrected. Gas molecules establish 
an equilibrium between those molecules dissolved in liquid and those in air. 


The composition of air in the atmosphere and in the alveoli differs. In both 
cases, the relative concentration of gases is nitrogen > oxygen > water 
vapor > carbon dioxide. The amount of water vapor present in alveolar air 
is greater than that in atmospheric air ([link]). Recall that the respiratory 
system works to humidify incoming air, thereby causing the air present in 
the alveoli to have a greater amount of water vapor than atmospheric air. In 
addition, alveolar air contains a greater amount of carbon dioxide and less 
oxygen than atmospheric air. This is no surprise, as gas exchange removes 
oxygen from and adds carbon dioxide to alveolar air. Both deep and forced 
breathing cause the alveolar air composition to be changed more rapidly 
than during quiet breathing. As a result, the partial pressures of oxygen and 
carbon dioxide change, affecting the diffusion process that moves these 


materials across the membrane. This will cause oxygen to enter and carbon 
dioxide to leave the blood more quickly. 


Composition and Partial Pressures of Alveolar Air 


Partial 

Percent of total pressure 
Gas composition (mm Hg) 
Nitrogen (N>) 74.9 969 
Oxygen (O>) 13-7. 104 
Water (H2O) 6.2 40 
Carbon dioxide (CO>) a2 47 
Total composition/total 100% 760.0 


alveolar pressure 


Gas Exchange 


Gas exchange occurs at two sites in the body: in the lungs, where oxygen is 
picked up and carbon dioxide is released at the respiratory membrane, and 
at the tissues, where oxygen is released and carbon dioxide is picked up. 
External respiration is the exchange of gases with the external environment, 
and occurs in the alveoli of the lungs. Internal respiration is the exchange of 
gases with the internal environment, and occurs in the tissues. The actual 
exchange of gases occurs due to simple diffusion, because molecular 
oxygen and carbon dioxide are small and nonpolar. Energy is not required 
to move oxygen or carbon dioxide across membranes. Instead, these gases 


follow pressure gradients that allow them to diffuse. The anatomy of the 
lung maximizes the diffusion of gases: The respiratory membrane is highly 
permeable to gases; the respiratory and blood capillary membranes are very 
thin; and there is a large surface area throughout the lungs. 


External Respiration 


The pulmonary artery carries deoxygenated blood into the lungs from the 
heart, where it branches and eventually becomes the capillary network 
composed of pulmonary capillaries. These pulmonary capillaries create the 
respiratory membrane with the alveoli ((link]). As the blood is pumped 
through this capillary network, gas exchange occurs. Although a small 
amount of the oxygen is able to dissolve directly into plasma from the 
alveoli, most of the oxygen is picked up by erythrocytes (red blood cells) 
and binds to a protein called hemoglobin, a process described later in this 
chapter. Oxygenated hemoglobin is red, causing the overall appearance of 
bright red oxygenated blood, which returns to the heart through the 
pulmonary veins. Carbon dioxide is released in the opposite direction of 
oxygen, from the blood to the alveoli. Some of the carbon dioxide is 
returned on hemoglobin, but can also be dissolved in plasma or is present as 
a converted form, also explained in greater detail later in this chapter. 


External respiration occurs as a function of partial pressure differences in 
oxygen and carbon dioxide between the alveoli and the blood in the 
pulmonary capillaries. 

External Respiration 


Detached from hemoglobin 


4 Fused basement membranes Blood plasma 
I CO, (dissolved in plasma) 
ae 


i 


L 
() 
fs 
/ 


O, (dissolved in plasma) 


Converted from bicarbonate 


In external respiration, oxygen diffuses across 

the respiratory membrane from the alveolus to 

the capillary, whereas carbon dioxide diffuses 
out of the capillary into the alveolus. 


The partial pressure of carbon dioxide is also different between the alveolar 
air and the blood of the capillary. However, the partial pressure difference is 
less than that of oxygen, about 5 mm Hg. The partial pressure of carbon 
dioxide in the blood of the capillary is about 45 mm Hg, whereas its partial 
pressure in the alveoli is about 40 mm Hg. However, the solubility of 
carbon dioxide is much greater than that of oxygen—by a factor of about 20 
—in both blood and alveolar fluids. As a result, the relative concentrations 
of oxygen and carbon dioxide that diffuse across the respiratory membrane 
are similar. 


Internal Respiration 


Internal respiration is gas exchange that occurs at the level of body tissues 
({link]). Similar to external respiration, internal respiration also occurs as 
simple diffusion due to a partial pressure gradient. However, the partial 
pressure gradients are opposite of those present at the respiratory 
membrane. The partial pressure of oxygen in tissues is low because oxygen 


is continuously used for cellular respiration. In contrast, the partial pressure 
of oxygen in the blood is higher. This creates a pressure gradient that causes 
oxygen to dissociate from hemoglobin, diffuse out of the blood, cross the 
interstitial space, and enter the tissue. Hemoglobin that has little oxygen 
bound to it loses much of its brightness, so that blood returning to the heart 
is more burgundy (bluish-red) in color. 


Considering that cellular respiration continuously produces carbon dioxide, 
the partial pressure of carbon dioxide is lower in the blood than it is in the 
tissue, causing carbon dioxide to diffuse out of the tissue, cross the 
interstitial fluid, and enter the blood. It is then carried back to the lungs 
either bound to hemoglobin, dissolved in plasma, or in a converted form. 
By the time blood returns to the heart, the partial pressure of oxygen has 
returned to about 40 mm Hg, and the partial pressure of carbon dioxide has 
returned to about 45 mm Hg. The blood is then pumped back to the lungs to 
be oxygenated once again during external respiration. 

Internal Respiration 


Blood plasma 


—_ ™_ . 5 
O, O, (dissolved in plasma) 


Oxygen diffuses out of the capillary and into 
cells, whereas carbon dioxide diffuses out of 
cells and into the capillary. 


Note: 
Everyday Connection 
Hyperbaric Chamber Treatment 


A type of device used in some areas of medicine that exploits the behavior 
of gases is hyperbaric chamber treatment. A hyperbaric chamber is a unit 
that can be sealed and expose a patient to either 100 percent oxygen with 
increased pressure or a mixture of gases that includes a higher 
concentration of oxygen than normal atmospheric air, also at a higher 
partial pressure than the atmosphere. There are two major types of 
chambers: monoplace and multiplace. Monoplace chambers are typically 
for one patient, and the staff tending to the patient observes the patient 
from outside of the chamber ({link]). Some facilities have special 
monoplace hyperbaric chambers that allow multiple patients to be treated 
at once, usually in a sitting or reclining position, to help ease feelings of 
isolation or claustrophobia. Multiplace chambers are large enough for 
multiple patients to be treated at one time, and the staff attending these 
patients is present inside the chamber. In a multiplace chamber, patients are 
often treated with air via a mask or hood, and the chamber is pressurized. 
Hyperbaric Chamber 


(credit: “komunews”/flickr.com) 


Hyperbaric chamber treatment is based on the behavior of gases. As you 
recall, gases move from a region of higher partial pressure to a region of 
lower partial pressure. In a hyperbaric chamber, the atmospheric pressure is 
increased, causing a greater amount of oxygen than normal to diffuse into 


the bloodstream of the patient. Hyperbaric chamber therapy is used to treat 
a variety of medical problems, such as wound and graft healing, anaerobic 
bacterial infections, and carbon monoxide poisoning. Exposure to and 
poisoning by carbon monoxide is difficult to reverse, because 
hemoglobin’s affinity for carbon monoxide is much stronger than its 
affinity for oxygen, causing carbon monoxide to replace oxygen in the 
blood. Hyperbaric chamber therapy can treat carbon monoxide poisoning, 
because the increased atmospheric pressure causes more oxygen to diffuse 
into the bloodstream. At this increased pressure and increased 
concentration of oxygen, carbon monoxide is displaced from hemoglobin. 
Another example is the treatment of anaerobic bacterial infections, which 
are created by bacteria that cannot or prefer not to live in the presence of 
oxygen. An increase in blood and tissue levels of oxygen helps to kill the 
anaerobic bacteria that are responsible for the infection, as oxygen is toxic 
to anaerobic bacteria. For wounds and grafts, the chamber stimulates the 
healing process by increasing energy production needed for repair. 
Increasing oxygen transport allows cells to ramp up cellular respiration and 
thus ATP production, the energy needed to build new structures. 


Chapter Review 


Each specific gas in a mixture of gases exerts force (its partial pressure) 
independently of the other gases in the mixture. Gas molecules move down 
a pressure gradient; in other words, gas moves from a region of high 
pressure to a region of low pressure. The partial pressure of oxygen is high 
in the alveoli and low in the blood of the pulmonary capillaries. As a result, 
oxygen diffuses across the respiratory membrane from the alveoli into the 
blood. In contrast, the partial pressure of carbon dioxide is high in the 
pulmonary capillaries and low in the alveoli. Therefore, carbon dioxide 
diffuses across the respiratory membrane from the blood into the alveoli. 
The amount of oxygen and carbon dioxide that diffuses across the 
respiratory membrane is similar. 


External respiration refers to gas exchange that occurs in the alveoli, 
whereas internal respiration refers to gas exchange that occurs in the tissue. 


Both are driven by partial pressure differences. 


Review Questions 


Exercise: 


Problem: 


Gas moves from an area of partial pressure to an area of 
partial pressure. 


a. low; high 
b. low; low 

c. high; high 
d. high; low 


Solution: 


D 
Exercise: 


Problem: 


Gas exchange that occurs at the level of the tissues is called 


a. external respiration 

b. interpulmonary respiration 
c. internal respiration 

d. pulmonary ventilation 


Solution: 


C 


Exercise: 


Problem: 


The partial pressure of carbon dioxide is 45 mm Hg in the blood and 
40 mm Hg in the alveoli. What happens to the carbon dioxide? 


a. It diffuses into the blood. 

b. It diffuses into the alveoli. 

c. The gradient is too small for carbon dioxide to diffuse. 
d. It decomposes into carbon and oxygen. 


Solution: 


B 


Critical Thinking Questions 


Exercise: 
Problem: 


A smoker develops damage to several alveoli that then can no longer 
function. How does this affect gas exchange? 


Solution: 


The damaged alveoli will have insufficient ventilation, causing the 
partial pressure of oxygen in the alveoli to decrease. As a result, the 
pulmonary capillaries serving these alveoli will constrict, redirecting 
blood flow to other alveoli that are receiving sufficient ventilation. 


Glossary 
Dalton’s law 


statement of the principle that a specific gas type in a mixture exerts its 
own pressure, as if that specific gas type was not part of a mixture of 


gases 


external respiration 
gas exchange that occurs in the alveoli 


Henry’s law 
statement of the principle that the concentration of gas in a liquid is 
directly proportional to the solubility and partial pressure of that gas 


internal respiration 
gas exchange that occurs at the level of body tissues 


partial pressure 
force exerted by each gas in a mixture of gases 


total pressure 
sum of all the partial pressures of a gaseous mixture 


ventilation 
movement of air into and out of the lungs; consists of inspiration and 
expiration 


Transport of Gases 
By the end of this section, you will be able to: 


e Describe the principles of oxygen transport 
¢ Describe the structure of hemoglobin 
e Describe the principles of carbon dioxide transport 


The other major activity in the lungs is the process of respiration, the 
process of gas exchange. The function of respiration is to provide oxygen 
for use by body cells during cellular respiration and to eliminate carbon 
dioxide, a waste product of cellular respiration, from the body. In order for 
the exchange of oxygen and carbon dioxide to occur, both gases must be 
transported between the external and internal respiration sites. Both gases 
require a specialized transport system for the majority of the gas molecules 
to be moved between the lungs and other tissues. 


Oxygen Transport in the Blood 


The majority of oxygen molecules are carried from the lungs to the body’s 
tissues by a specialized transport system, which relies on the erythrocyte— 
the red blood cell. Erythrocytes contain hemoglobin, which serves to bind 
oxygen molecules to the erythrocyte ([link]). Heme is the portion of 
hemoglobin that contains iron, and it is heme that binds oxygen. One 
erythrocyte contains four iron ions, and because of this, each erythrocyte is 
capable of carrying up to four molecules of oxygen. As oxygen diffuses 
across the respiratory membrane from the alveolus to the capillary, it also 
diffuses into the red blood cell and is bound by hemoglobin. The following 
reversible chemical reaction describes the production of the final product, 
oxyhemoglobin (Hb—O;), which is formed when oxygen binds to 
hemoglobin. Oxyhemoglobin is a bright red-colored molecule that 
contributes to the bright red color of oxygenated blood. 

Equation: 


Hb + O, © Hb = O, 


Erythrocyte and Hemoglobin 


Hemoglobin consists of four 
subunits, each of which 
contains one molecule of iron. 


Function of Hemoglobin 


Hemoglobin is composed of subunits, a protein structure that is referred to 
as a quaternary structure. Each of the four subunits that make up 
hemoglobin is arranged in a ring-like fashion, with an iron atom covalently 
bound to the heme in the center of each subunit. When all four heme sites 
are occupied, the hemoglobin is said to be saturated. Hemoglobin saturation 
of 100 percent means that every heme unit in all of the erythrocytes of the 
body is bound to oxygen. In a healthy individual with normal hemoglobin 
levels, hemoglobin saturation generally ranges from 95 percent to 99 
percent. 


Carbon Dioxide Transport in the Blood 


Carbon dioxide is transported by three major mechanisms. The first 
mechanism of carbon dioxide transport is by blood plasma, as some carbon 
dioxide molecules dissolve in the blood. The second mechanism is transport 
in the form of bicarbonate (HCO3 ), which also dissolves in plasma. The 
third mechanism of carbon dioxide transport is similar to the transport of 
oxygen by erythrocytes ((Llink]). 

Carbon Dioxide Transport 


(a) CO, carried in RBC 


(b) HCO, dissolved in 
plasma as carbonic 
acid 


(c) CO, dissolved in 
plasma 


Carbon dioxide is transported by three different 
methods: (a) in erythrocytes; (b) after forming 
carbonic acid (H»CO3 ), which is dissolved in 

plasma; (c) and in plasma. 


Dissolved Carbon Dioxide 


Although carbon dioxide is not considered to be highly soluble in blood, a 
small fraction—about 7 to 10 percent—of the carbon dioxide that diffuses 
into the blood from the tissues dissolves in plasma. The dissolved carbon 
dioxide then travels in the bloodstream and when the blood reaches the 
pulmonary capillaries, the dissolved carbon dioxide diffuses across the 
respiratory membrane into the alveoli, where it is then exhaled during 
pulmonary ventilation. 


Bicarbonate Buffer 


A large fraction—about 70 percent—of the carbon dioxide molecules that 
diffuse into the blood is transported to the lungs as bicarbonate. Most 
bicarbonate is produced in erythrocytes after carbon dioxide diffuses into 
the capillaries, and subsequently into red blood cells. Carbonic anhydrase 
(CA) causes carbon dioxide and water to form carbonic acid (H2COs3), 
which dissociates into two ions: bicarbonate (HCO3_) and hydrogen (H”). 
The following formula depicts this reaction: 

Equation: 


CO, + H,0 @ H,CO; + Ht + HCO3_ 


At the pulmonary capillaries, the chemical reaction that produced 
bicarbonate (shown above) is reversed, and carbon dioxide and water are 
the products. Hydrogen ions and bicarbonate ions join to form carbonic 
acid, which is converted into carbon dioxide and water by carbonic 
anhydrase. Carbon dioxide diffuses out of the erythrocytes and into the 
plasma, where it can further diffuse across the respiratory membrane into 
the alveoli to be exhaled during pulmonary ventilation. 


Carbaminohemoglobin 


About 20 percent of carbon dioxide is bound by hemoglobin and is 
transported to the lungs. Carbon dioxide does not bind to iron as oxygen 
does; instead, carbon dioxide binds amino acids on the globin portions of 
hemoglobin to form carbaminohemoglobin, which forms when 
hemoglobin and carbon dioxide bind. When hemoglobin is not transporting 
oxygen, it tends to have a bluish-purple tone to it, creating the darker 
maroon color typical of deoxygenated blood. The following formula depicts 
this reversible reaction: 

Equation: 


Similar to the transport of oxygen by heme, the binding and dissociation of 
carbon dioxide to and from hemoglobin is dependent on the partial pressure 
of carbon dioxide. Because carbon dioxide is released from the lungs, blood 
that leaves the lungs and reaches body tissues has a lower partial pressure of 
carbon dioxide than is found in the tissues. As a result, carbon dioxide 
leaves the tissues because of its higher partial pressure, enters the blood, 
and then moves into red blood cells, binding to hemoglobin. In contrast, in 
the pulmonary capillaries, the partial pressure of carbon dioxide is high 
compared to within the alveoli. As a result, carbon dioxide dissociates 
readily from hemoglobin and diffuses across the respiratory membrane into 
the air. 


Chapter Review 


Oxygen is primarily transported through the blood by erythrocytes. These 
cells contain a protein molecule called hemoglobin, which is composed of 
four subunits with a ring-like structure. Each subunit contains one atom of 
iron bound to a molecule of heme. Heme binds oxygen so that each 
hemoglobin molecule can bind up to four oxygen molecules. When all of 
the heme units in the blood are bound to oxygen, hemoglobin is considered 
to be saturated. 


Carbon dioxide is transported in blood by three different mechanisms: as 
dissolved carbon dioxide, as bicarbonate, or as carbaminohemoglobin. A 
small portion of carbon dioxide remains. The largest amount of transported 
carbon dioxide is as bicarbonate, formed in erythrocytes. For this 
conversion, carbon dioxide is combined with water with the aid of an 
enzyme called carbonic anhydrase. This combination forms carbonic acid, 
which spontaneously dissociates into bicarbonate and hydrogen ions. As 
bicarbonate builds up in erythrocytes, it is moved across the membrane into 
the plasma. At the pulmonary capillaries, bicarbonate re-enters erythrocytes 
and the reaction with carbonic anhydrase is reversed, recreating carbon 
dioxide and water. Carbon dioxide then diffuses out of the erythrocyte and 
across the respiratory membrane into the air. An intermediate amount of 
carbon dioxide binds directly to hemoglobin to form carbaminohemoglobin. 


Interactive Link Questions 


Exercise: 
Problem: 
Watch this video to see the transport of oxygen from the lungs to the 


tissues. Why is oxygenated blood bright red, whereas deoxygenated 
blood tends to be more of a purple color? 


Solution: 


When oxygen binds to the hemoglobin molecule, oxyhemoglobin is 
created, which has a red color to it. Hemoglobin that is not bound to 
oxygen tends to be more of a blue—purple color. Oxygenated blood 
traveling through the systemic arteries has large amounts of 
oxyhemoglobin. As blood passes through the tissues, much of the 
oxygen is released into systemic capillaries. The deoxygenated blood 
returning through the systemic veins, therefore, contains much smaller 
amounts of oxyhemoglobin. The more oxyhemoglobin that is present 
in the blood, the redder the fluid will be. As a result, oxygenated blood 
will be much redder in color than deoxygenated blood. 


Review Questions 


Exercise: 


Problem: 


Oxyhemoglobin forms by a chemical reaction between which of the 
following? 


a. hemoglobin and carbon dioxide 

b. carbonic anhydrase and carbon dioxide 
c. hemoglobin and oxygen 

d. carbonic anhydrase and oxygen 


Solution: 


C 
Exercise: 


Problem: 


In what form is the majority of carbon dioxide transported in the 
blood? 


a. Bicarbonate ion 

b. Carbaminohemoglobin 
c. Carbonic acid 

d. Carbonic anhydrase 


Solution: 


A 


Critical Thinking Questions 


Exercise: 
Problem: 


Describe the relationship between the partial pressure of oxygen and 
the binding of oxygen to hemoglobin. 


Solution: 


As the partial pressure of oxygen increases, the number of oxygen 
molecules bound by hemoglobin increases, thereby increasing the 
saturation of hemoglobin. 


Exercise: 


Problem: 


Describe three ways in which carbon dioxide can be transported. 


Solution: 


Carbon dioxide can be transported by three mechanisms: dissolved in 
plasma, as bicarbonate, or as carbaminohemoglobin. Dissolved in 
plasma, carbon dioxide molecules simply diffuse into the blood from 
the tissues. Bicarbonate is created by a chemical reaction that occurs 
mostly in erythrocytes, joining carbon dioxide and water by carbonic 
anhydrase, producing carbonic acid, which breaks down into 
bicarbonate and hydrogen ions. Carbaminohemoglobin is the bound 
form of hemoglobin and carbon dioxide. 


Glossary 


Bohr effect 
relationship between blood pH and oxygen dissociation from 


hemoglobin 


carbaminohemoglobin 
bound form of hemoglobin and carbon dioxide 


carbonic anhydrase (CA) 
enzyme that catalyzes the reaction that causes carbon dioxide and 
water to form carbonic acid 


chloride shift 
facilitated diffusion that exchanges bicarbonate (HCO3_) with chloride 


(CI) ions 

Haldane effect 
relationship between the partial pressure of oxygen and the affinity of 
hemoglobin for carbon dioxide 


oxyhemoglobin 


(Hb—O,) bound form of hemoglobin and oxygen 


oxygen—hemoglobin dissociation curve 
graph that describes the relationship of partial pressure to the binding 
and disassociation of oxygen to and from heme 


Endocrine System 
By the end of this section, you will be able to: 


e List the different types of hormones and explain their roles in 
maintaining homeostasis 

e Explain how hormones work 

e Explain how hormone production is regulated 

e Describe the role of different glands in the endocrine system 

e Explain how the different glands work together to maintain 
homeostasis 


The endocrine system produces hormones that function to control and 
regulate many different body processes. The endocrine system coordinates 
with the nervous system to control the functions of the other organ systems. 
Cells of the endocrine system produce molecular signals called hormones. 
These cells may compose endocrine glands, may be tissues or may be 
located in organs or tissues that have functions in addition to hormone 
production. Hormones circulate throughout the body and stimulate a 
response in cells that have receptors able to bind with them. The changes 
brought about in the receiving cells affect the functioning of the organ 
targeted by the hormone. Many of the hormones are secreted in response to 
signals from the nervous system, thus the two systems act in concert to 
effect changes in the body. 


Hormones 


Maintaining homeostasis within the body requires the coordination of many 
different systems and organs. One mechanism of communication between 
neighboring cells, and between cells and tissues in distant parts of the body, 
occurs through the release of chemicals called hormones. Hormones are 
released into body fluids, usually blood, which carries them to their target 
cells where they elicit a response. The cells that secrete hormones are often 
located in specific organs, called endocrine glands, and the cells, tissues, 
and organs that secrete hormones make up the endocrine system. Examples 
of endocrine organs include the pancreas, which produces the hormones 
insulin and glucagon to regulate blood-glucose levels, the adrenal glands, 
which produce hormones such as epinephrine and norepinephrine that 


regulate responses to stress, and the thyroid gland, which produces thyroid 
hormones that regulate metabolic rates. 


The endocrine glands differ from the exocrine glands. Exocrine glands 
secrete chemicals through ducts that lead outside the gland (not to the 
blood). For example, sweat produced by sweat glands is released into ducts 
that carry sweat to the surface of the skin. The pancreas has both endocrine 
and exocrine functions because besides releasing hormones into the blood. 
It also produces digestive juices, which are carried by ducts into the small 
intestine. 


Note: 

Career in Action 

Endocrinologist 

An endocrinologist is a medical doctor who specializes in treating 
endocrine disorders. An endocrine surgeon specializes in the surgical 
treatment of endocrine diseases and glands. Some of the diseases that are 
managed by endocrinologists include disorders of the pancreas (diabetes 
mellitus), disorders of the pituitary (gigantism, acromegaly, and pituitary 
dwarfism), disorders of the thyroid gland (goiter and Graves’ disease), and 
disorders of the adrenal glands (Cushing’s disease and Addison’s disease). 
Endocrinologists are required to assess patients and diagnose endocrine 
disorders through extensive use of laboratory tests. Many endocrine 
diseases are diagnosed using tests that stimulate or suppress endocrine 
organ functioning. Blood samples are then drawn to determine the effect of 
stimulating or suppressing an endocrine organ on the production of 
hormones. For example, to diagnose diabetes mellitus, patients are required 
to fast for 12 to 24 hours. They are then given a sugary drink, which 
stimulates the pancreas to produce insulin to decrease blood-glucose levels. 
A blood sample is taken one to two hours after the sugar drink is 
consumed. If the pancreas is functioning properly, the blood-glucose level 
will be within a normal range. Another example is the A1C test, which can 
be performed during blood screening. The A1C test measures average 
blood-glucose levels over the past two to three months. The A1C test is an 
indicator of how well blood glucose is being managed over a long time. 


Once a disease such as diabetes has been diagnosed, endocrinologists can 
prescribe lifestyle changes and medications to treat the disease. Some cases 
of diabetes mellitus can be managed by exercise, weight loss, and a healthy 
diet; in other cases, medications may be required to enhance insulin’s 
production or effect. If the disease cannot be controlled by these means, the 
endocrinologist may prescribe insulin injections. 

In addition to clinical practice, endocrinologists may also be involved in 
primary research and development activities. For example, ongoing islet 
transplant research is investigating how healthy pancreas islet cells may be 
transplanted into diabetic patients. Successful islet transplants may allow 
patients to stop taking insulin injections. 


How Hormones Work 


Hormones cause changes in target cells by binding to specific cell-surface 
or intracellular hormone receptors, molecules embedded in the cell 
membrane or floating in the cytoplasm with a binding site that matches a 
binding site on the hormone molecule. In this way, even though hormones 
circulate throughout the body and come into contact with many different 
cell types, they only affect cells that possess the necessary receptors. 
Receptors for a specific hormone may be found on or in many different 
cells or may be limited to a small number of specialized cells. For example, 
thyroid hormones act on many different tissue types, stimulating metabolic 
activity throughout the body. Cells can have many receptors for the same 
hormone but often also possess receptors for different types of hormones. 
The number of receptors that respond to a hormone determines the cell’s 
sensitivity to that hormone, and the resulting cellular response. 
Additionally, the number of receptors available to respond to a hormone can 
change over time, resulting in increased or decreased cell sensitivity. 


Endocrine Glands 


The endocrine glands secrete hormones into the surrounding interstitial 
fluid; those hormones then diffuse into blood and are carried to various 


organs and tissues within the body. The endocrine glands include the 
pituitary, thyroid, parathyroid, adrenal glands, gonads, pineal, and pancreas. 


The pituitary gland is located at the base of the brain ({link]a). It is 
attached to the hypothalamus. The posterior lobe stores and releases 
oxytocin and antidiuretic hormone (ADH) produced by the hypothalamus. 
The anterior lobe responds to hormones produced by the hypothalamus by 
producing its own hormones, most of which regulate other hormone- 
producing glands. 


Pineal gland 


Cerebellum 
Pituitary gland 


Pons 


Medulla oblongata __ | 


\ 


Spinal cord 


(a) (b) 


Adrenal gland 


Gall bladder 


Stomach 


Bile duct 


Duodenum 
Pancreas 


Kidney Pancreatic duct 
(c) (d) 


(a) The pituitary gland sits at the base of the brain, just above 


the brain stem. (b) The parathyroid glands are located on the 
posterior of the thyroid gland. (c) The adrenal glands are on top 
of the kidneys. d) The pancreas is found between the stomach 
and the small intestine. (credit: modification of work by NCI, 
NIH) 


The anterior pituitary produces six hormones: growth hormone, prolactin, 
thyroid-stimulating hormone, adrenocorticotropic hormone, follicle- 
stimulating hormone (FSH), and luteinizing hormone (LH). Growth 
hormone stimulates cellular activities like protein synthesis that promote 
growth. Prolactin stimulates the production of milk by the mammary 
glands. The other hormones produced by the anterior pituitary regulate the 
production of hormones by other endocrine tissues ({link]). The posterior 
pituitary is significantly different in structure from the anterior pituitary. It 
is a part of the brain, extending down from the hypothalamus, and contains 
mostly nerve fibers that extend from the hypothalamus to the posterior 
pituitary. 


The thyroid gland is located in the neck, just below the larynx and in front 
of the trachea ({link |b). It is a butterfly-shaped gland with two lobes that are 
connected. The thyroid follicle cells synthesize the hormone thyroxine, 
which is also known as Ty because it contains four atoms of iodine, and 
triiodothyronine, also known as T3 because it contains three atoms of 
iodine. T3 and Ty are released by the thyroid in response to thyroid- 
stimulating hormone produced by the anterior pituitary, and both T3 and T, 
have the effect of stimulating metabolic activity in the body and increasing 
energy use. A third hormone, calcitonin, is also produced by the thyroid. 
Calcitonin is released in response to rising calcium ion concentrations in the 
blood and has the effect of reducing those levels. 


Most people have four parathyroid glands; however, the number can vary 
from two to six. These glands are located on the posterior surface of the 
thyroid gland ([link]b). 


The parathyroid glands produce parathyroid hormone. Parathyroid hormone 
increases blood calcium concentrations when calcium ion levels fall below 
normal. 


The adrenal glands are located on top of each kidney ((link]c). The adrenal 
glands consist of an outer adrenal cortex and an inner adrenal medulla. 
These regions secrete different hormones. 


The adrenal cortex produces mineralocorticoids, glucocorticoids, and 
gonadocorticoids (principally androgens). The main mineralocorticoid is 
aldosterone, which regulates the concentration of ions in urine, sweat, and 
saliva. Aldosterone release from the adrenal cortex is stimulated by a 
decrease in blood concentrations of sodium ions, blood volume, or blood 
pressure, or by an increase in blood potassium levels. The glucocorticoids 
maintain proper blood-glucose levels between meals. They also control a 
response to stress by increasing glucose synthesis from fats and proteins 
and interact with epinephrine to cause vasoconstriction. Androgens are sex 
hormones that are produced in small amounts by the adrenal cortex. They 
do not normally affect sexual characteristics and may supplement sex 
hormones released from the gonads. The adrenal medulla contains two 
types of secretory cells: one that produces epinephrine (adrenaline) and 
another that produces norepinephrine (noradrenaline). Epinephrine and 
norepinephrine cause immediate, short-term changes in response to 
stressors, inducing the so-called fight-or-flight response. The responses 
include increased heart rate, breathing rate, cardiac muscle contractions, 
and blood-glucose levels. They also accelerate the breakdown of glucose in 
skeletal muscles and stored fats in adipose tissue, and redirect blood flow 
toward skeletal muscles and away from skin and viscera. The release of 
epinephrine and norepinephrine is stimulated by neural impulses from the 
sympathetic nervous system that originate from the hypothalamus. 


The pancreas is an elongate organ located between the stomach and the 
proximal portion of the small intestine ((link]d). It contains both exocrine 
cells that excrete digestive enzymes and endocrine cells that release 
hormones. 


The endocrine cells of the pancreas form clusters called pancreatic islets or 
the islets of Langerhans. Among the cell types in each pancreatic islet are 


the alpha cells, which produce the hormone glucagon, and the beta cells, 
which produce the hormone insulin. These hormones regulate blood- 
glucose levels. Alpha cells release glucagon as blood-glucose levels 
decline. When blood-glucose levels rise, beta cells release insulin. 
Glucagon causes the release of glucose to the blood from the liver, and 
insulin facilitates the uptake of glucose by the body’s cells. 


The gonads(testes in the male and ovaries in the female)produce steroid 
hormones. The testes produce androgens, testosterone being the most 
prominent, which allow for the development of secondary sex 
characteristics and the production of sperm cells. The ovaries produce 
estrogen and progesterone, which cause secondary sex characteristics, 
regulate production of eggs, control pregnancy, and prepare the body for 
childbirth. 


The kidneys also possess endocrine function. Erythropoietin (EPO) is 
released by kidneys in response to low blood oxygen levels. EPO triggers 
an increase in the rate of production of red blood cells in the red bone 
marrow. EPO has been used by athletes (e.g. cyclists) to improve 
performance because more RBCs mean more oxygen can be transported. 
However, EPO doping has its risks, because it thickens the blood and 
increases strain on the heart; it also increases the risk of blood clots and 
therefore heart attacks and stroke. 


Endocrine Glands and Their Associated Hormones 


Endocrine Associated 
Gland Hormones Effect 
Pituitary promotes growth of body 


growth hormone 


(anterior) tissues 


Endocrine Glands and Their Associated Hormones 


Endocrine 
Gland 


Pituitary 
(posterior) 


Thyroid 


Parathyroid 


Associated 
Hormones 


prolactin 


thyroid-stimulating 
hormone 


adrenocorticotropic 
hormone 


follicle-stimulating 
hormone 


luteinizing 
hormone 


antidiuretic 
hormone 


oxytocin 
thyroxine, 
triiodothyronine 


calcitonin 


parathyroid 
hormone 


Effect 
promotes milk production 


stimulates thyroid hormone 
release 


stimulates hormone release 
by adrenal cortex 


stimulates gamete 
production 


stimulates androgen 
production by gonads in 
males; stimulates ovulation 
and production of estrogen 
and progesterone in females 


stimulates water 
reabsorption by kidneys 


stimulates uterine 
contractions during 
childbirth 


stimulate metabolism 


reduces blood Ca2* levels 


increases blood Ca2* levels 


Endocrine Glands and Their Associated Hormones 


Endocrine Associated 
Gland Hormones Effect 
aldosterone increases blood Na’ levels 
Adrenal 
cortisol, . 
(cortex) ; increase blood-glucose 
corticosterone, 
levels 
cortisone 
Adrenal epinephrine, stimulate fight-or-flight 
(medulla) norepinephrine response 
ae reduces blood-glucose 
insulin 
levels 
Pancreas 
increases blood-glucose 
glucagon 


levels 


Regulation of Hormone Production 


Hormone production and release are primarily controlled by negative 
feedback, as described in the discussion on homeostasis. In this way, the 
concentration of hormones in blood is maintained within a narrow range. 
For example, the anterior pituitary signals the thyroid to release thyroid 
hormones. Increasing levels of these hormones in the blood then give 
feedback to the hypothalamus and anterior pituitary to inhibit further 
signaling to the thyroid gland ((link]). 


Note: 
Art Connection 


Thyroid System 


opin-releasing 


e (TRH) 


d-stimulating 
one (TSH) 


The anterior pituitary stimulates the 
thyroid gland to release thyroid hormones 
T3 and Ty. Increasing levels of these 
hormones in the blood result in feedback 
to the hypothalamus and anterior 
pituitary to inhibit further signaling to the 
thyroid gland. (credit: modification of 
work by Mikael Haggstr6m) 


Section Summary 


Hormones cause cellular changes by binding to receptors on or in target 
cells. The number of receptors on a target cell can increase or decrease in 
response to hormone activity. 


Hormone levels are primarily controlled through negative feedback, in 
which rising levels of a hormone inhibit its further release. 


The pituitary gland is located at the base of the brain. The anterior pituitary 
receives signals from the hypothalamus and produces six hormones. The 
posterior pituitary is an extension of the brain and releases hormones 
(antidiuretic hormone and oxytocin) produced by the hypothalamus. The 
thyroid gland is located in the neck and is composed of two lobes. The 
thyroid produces the hormones thyroxine and triiodothyronine. The thyroid 
also produces calcitonin. The parathyroid glands lie on the posterior surface 
of the thyroid gland and produce parathyroid hormone. 


The adrenal glands are located on top of the kidneys and consist of the 
adrenal cortex and adrenal medulla. The adrenal cortex produces the 
glucocorticoids, mineralocorticoids, and gonadocorticoids. The adrenal 
medulla is the inner part of the adrenal gland and produces epinephrine and 
norepinephrine. 


The pancreas lies in the abdomen between the stomach and the small 
intestine. Clusters of endocrine cells in the pancreas form the islets of 
Langerhans, which contain alpha cells that release glucagon and beta cells 
that release insulin. The kidneys produce erythropoietin. The gonads 
produce steroid hormones, including testosterone in males and estrogen and 
progesterone in females. 


Art Connections 


Exercise: 


Problem: 


Goiter, a disease caused by iodine deficiency, results in the inability of 
the thyroid gland to form T3 and T,. The body typically attempts to 
compensate by producing greater amounts of TSH. Which of the 
following symptoms would you expect goiter to cause? 


a. Hypothyroidism, resulting in weight gain, cold sensitivity, and 
reduced mental activity. 

b. Hyperthyroidism, resulting in weight loss, profuse sweating and 
increased heart rate. 

c. Hyperthyroidism, resulting in weight gain, cold sensitivity, and 
reduced mental activity. 

d. Hypothyroidism, resulting in weight loss, profuse sweating and 
increased heart rate. 


Solution: 


[link]A 


Review Questions 


Exercise: 
Problem: 


Most of the hormones produced by the anterior pituitary perform what 
function? 


a. regulate growth 

b. regulate the sleep cycle 

c. regulate production of other hormones 

d. regulate blood volume and blood pressure 


Solution: 


C 


Exercise: 


Problem: What is the function of the hormone erythropoietin? 


a. stimulates production of red blood cells 
b. stimulates muscle growth 

c. causes the fight-or-flight response 

d. causes testosterone production 


Solution: 
A 
Exercise: 
Problem: Which endocrine glands are associated with the kidneys? 


a. thyroid glands 
b. pituitary glands 
c. adrenal glands 
d. gonads 


Solution: 


C 


Free Response 


Exercise: 


Problem: 


What is a similarity and a difference between an exocrine gland and an 
endocrine gland? 


Solution: 


The cells of both exocrine and endocrine glands produce a product that 
will be secreted by the gland. An exocrine gland has a duct and 
secretes its product to the outside of the gland, not into the 
bloodstream. An endocrine gland secretes its product into the 
bloodstream and does not use a duct. 


Exercise: 


Problem: 


Many hormone systems regulate body functions through opposing 
hormone actions. Describe how opposing hormone actions regulate 
blood-glucose levels? 


Solution: 


Blood-glucose levels are regulated by hormones produced by the 
pancreas: insulin and glucagon. When blood-glucose levels are 
increasing, the pancreas releases insulin, which stimulates uptake of 
glucose by cells. When blood-glucose levels are decreasing, the 
pancreas releases glucagon, which stimulates the release of stored 
glucose by the liver to the bloodstream. 


Glossary 


adrenal gland 
the endocrine gland associated with the kidneys 


down-regulation 
a decrease in the number of hormone receptors in response to 
increased hormone levels 


endocrine gland 
the gland that secretes hormones into the surrounding interstitial fluid, 
which then diffuse into blood and are carried to various organs and 
tissues within the body 


exocrine gland 
the gland that secretes chemicals through ducts that lead to skin 
surfaces, body cavities, and organ cavities. 


hormone 
a chemical released by cells in one area of the body that affects cells in 
other parts of the body 


intracellular hormone receptor 
a hormone receptor in the cytoplasm or nucleus of a cell 


pancreas 
the organ located between the stomach and the small intestine that 
contains exocrine and endocrine cells 


parathyroid gland 
the gland located on the surface of the thyroid that produces 
parathyroid hormone 


pituitary gland 
the endocrine gland located at the base of the brain composed of an 
anterior and posterior region; also called hypophysis 


thymus 
the gland located behind the sternum that produces thymosin hormones 
that contribute to the development of the immune system 


thyroid gland 
an endocrine gland located in the neck that produces thyroid hormones 
thyroxine and triiodothyronine 


up-regulation 
an increase in the number of hormone receptors in response to 
increased hormone levels 


Introduction to the Urinary System 
class="introduction" 
Sewage Treatment Plant 


(credit: 
“eutrophication&hypoxia’/flickr.com 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


e Describe the composition of urine 
e Label structures of the urinary system 
e Characterize the roles of each of the parts of the urinary system 


e Trace the flow of blood through the kidney 

¢ Outline how blood is filtered in the kidney nephron 

e List some of the solutes filtered, secreted, and reabsorbed in different 
parts of the nephron 


The urinary system has roles you may be well aware of: cleansing the blood 
and ridding the body of wastes probably come to mind. However, there are 
additional, equally important functions played by the system. Take for 
example, regulation of pH, a function shared with the lungs and the buffers 
in the blood. Additionally, the regulation of blood pressure is a role shared 
with the heart and blood vessels. What about regulating the concentration of 
solutes in the blood? Did you know that the kidney is important in 
determining the concentration of red blood cells? Eighty-five percent of the 
erythropoietin (EPO) produced to stimulate red blood cell production is 
produced in the kidneys. The kidneys also perform the final synthesis step 
of vitamin D production. 


If the kidneys fail, these functions are compromised or lost altogether, with 
devastating effects on homeostasis. The affected individual might 
experience weakness, lethargy, shortness of breath, anemia, widespread 
edema (swelling), metabolic acidosis, rising potassium levels, heart 
arrhythmias, and more. Each of these functions is vital to your well-being 
and survival. The urinary system, controlled by the nervous system, also 
stores urine until a convenient time for disposal and then provides the 
anatomical structures to transport this waste liquid to the outside of the 
body. Failure of nervous control or the anatomical structures leading to a 
loss of control of urination results in a condition called incontinence. 


This chapter will help you to understand the anatomy of the urinary system 
and how it enables the physiologic functions critical to homeostasis. It is 
best to think of the kidney as a regulator of plasma makeup rather than 
simply a urine producer. As you read each section, ask yourself this 
question: “What happens if this does not work?” This question will help 
you to understand how the urinary system maintains homeostasis and 
affects all the other systems of the body and the quality of one’s life. 


Note: 


rE ee 
[3 openstax COLLEGE 
Souee 
Watch this video from the Howard Hughes Medical Institute for an 
introduction to the urinary system. 


Urinary System Anatomy and Function 
By the end of this section, you will be able to: 


e Identify the following structures of the urinary system and describe 
their function: kidney, ureters, bladder, and urethra 

e Describe the structure of the kidneys and the functions of the parts of 
the kidney 

¢ Describe how the nephron is the functional unit of the kidney and 
explain how it actively filters blood and generates urine 

e Detail the three steps in the formation of urine: glomerular filtration, 
tubular reabsorption, and tubular secretion 


Anatomy of the Urinary System 


The kidneys, illustrated in [link], are a pair of bean-shaped structures that 
are located just below and behind the liver in the abdominal cavity. The 
adrenal glands sit on top of each kidney and function as a component of the 
endocrine system. Kidneys filter blood and purify it. All the blood in the 
human body is filtered many times a day by the kidneys; these organs use 
up almost 25 percent of the oxygen absorbed through the lungs to perform 
this function. Oxygen allows the kidney cells to efficiently manufacture 
chemical energy in the form of ATP through aerobic respiration. The filtrate 
coming out of the kidneys is called urine. Urine is carried from the kidneys 
to the urinary bladder via the ureters, which are approximately 30 cm 
long. As urine passes through the ureters, it does not passively drain into the 
bladder but rather is propelled by waves of peristalsis (smooth muscle 
contractions). The bladder collects urine from both ureters . During late 
pregnancy, its capacity (typically several hundred milliliters) is reduced due 
to compression by the enlarging uterus, resulting in increased frequency of 
urination. The urethra transports urine from the bladder to the outside of 
the body for disposal. The urethra is the only urologic organ that shows any 
significant anatomic difference between males and females; all other urine 
transport structures are identical. In females, the urethra is relatively short 
length, about 4 cm, and is less of a barrier to fecal bacteria than the longer 
male urethra (approximately 20 cm). This length difference is the best 
explanation for the greater incidence of urinary tract infections (UTIs) in 


women. The urethra in males also has a reproductive function, as it 
transports semen (sperm and accessory fluids). 


Renal artery 


Adrenal 
gland 


Kidney Renal vein 


Ureter 
Renal 


pelvis 


Bladder 


Urethra 


Kidneys filter the blood, 
producing urine that is stored in 
the bladder prior to elimination 

through the urethra. (credit: 
modification of work by NCI) 


Kidney Structure 


Internally, the kidney has three regions—an outer cortex, a medulla in the 
middle, and the renal pelvis in the region called the hilum of the kidney. 
The hilum is the concave part of the bean-shape where blood vessels and 
nerves enter and exit the kidney; it is also the point of exit for the ureters. 
The renal cortex is granular due to the presence of renal corpuscles; 
nephron tubules can be found throughout the renal cortex and renal 
pyramids, the multiple tissue masses that make up the majority of the renal 


medulla. There are, on average, eight renal pyramids in each kidney. Urine 
that is produced by the nephrons travels into the renal pelvis and then into 
the ureters, which carry the urine to the bladder. 


Note: 
Art Connection 


Capillaries 


Arteriole 


Venule 
' Renal pyramid 
Renal vein 


Renal artery 
Renal pelvis 


Major calyx 


Minor calyx 
Medulla 


Ureter 


Renal fascia 
and capsule 


Cortex 
The internal structure of the kidney is shown. 
(credit: modification of work by NCI) 


Because the kidney filters blood, its network of blood vessels is an 
important component of its structure and function. The arteries, veins, and 
nerves that supply the kidney enter and exit at the renal hilum. Renal blood 
supply starts with the branching of the aorta into the renal arteries and 
ends with the exiting of the renal veins to join the inferior vena cava, 
which transports blood back to the right atrium of the heart. The renal 
arteries split multiple times to form other blood vessels before branching 
into numerous afferent arterioles, and then enter the capillaries supplying 
the nephrons. 


As mentioned previously, the functional unit of the kidney is the nephron, 
illustrated in [link]. Each kidney is made up of over one million nephrons 
that dot the renal cortex. A nephron consists of three parts—a renal 
corpuscle, a renal tubule, and the associated capillary network. 


Note: 
Art Connection 


Proximal convoluted 
Nephron tubule 


[2 
} Medulla 


Peritubular 


aria Distal 
capillaries 


convoluted 
tubule 


Efferent 
arteriole 


Bowman's 
capsule 


Afferent 
arteriole 


The nephron is the functional unit of the kidney. The 
glomerulus and convoluted tubules are located in the 
kidney cortex, while collecting ducts are located in the 
pyramids of the medulla. (credit: modification of work by 
NIDDK) 


Renal Corpuscle 


The renal corpuscle, located in the renal cortex, is made up of a network of 
capillaries known as the glomerulus and the capsule, a cup-shaped chamber 
that surrounds it, called the glomerular or Bowman's capsule. 


Renal Tubule 


The renal tubule is a long and convoluted structure that emerges from the 
glomerulus and can be divided into three parts based on function. The first 
part is called the proximal convoluted tubule (PCT) due to its proximity 
to the glomerulus. The second part is called the loop of Henle, because it 
forms a loop (with descending and ascending limbs). The third part of the 
renal tubule is called the distal convoluted tubule (DCT). The DCT, which 
is the last part of the nephron, connects and empties its contents into 
collecting ducts. The urine will ultimately move into the renal pelvis and 
then into the ureters. 


Capillary Network within the Nephron 


The capillary network that originates from the renal arteries supplies the 
nephron with blood that needs to be filtered. The branch that enters the 
glomerulus is called the afferent arteriole. The branch that exits the 
glomerulus is called the efferent arteriole. Within the glomerulus, the 
network of capillaries is called the glomerular capillary bed. Once the 
efferent arteriole exits the glomerulus, it forms the peritubular capillary 
network, which surrounds and interacts with parts of the renal tubule. 


Note: 
Link to Learning 


Ae 


=. 

mess Openstax COLLEGE 
. 

ee 
[alae 


Go to this website to see another section of the kidney and to explore an 
animation of the workings of nephrons. 


Kidney Function and Physiology 


Kidneys filter blood in a three-step process. First, the nephrons filter blood 
that runs through the capillary network in the glomerulus. Almost all 
solutes, except for proteins, are filtered out into the glomerulus by a process 
called glomerular filtration. Second, the filtrate is collected in the renal 
tubules. Most of the solutes get reabsorbed in the PCT by a process called 
tubular reabsorption. In the loop of Henle, the filtrate continues to 
exchange solutes and water with the peritubular capillary network. Water is 
also reabsorbed during this step. Then, additional solutes and wastes are 
secreted into the kidney tubules during tubular secretion, which is, in 
essence, the opposite process to tubular reabsorption. The collecting ducts 
collect filtrate coming from the nephrons and this filtrate, called urine, will 
be transported into the renal pelvis and then to the ureters. This entire 
process is illustrated in [link]. 


2. Proximal convoluted tubule: 
reabsorbs ions, water, and 
nutrients; removes toxins 
and adjusts filtrate pH 


5. Distal tubule: 
selectively secretes 
and absorbs different 
ions to maintain blood 
PH and electrolyte 
balance 


1. Glomerulus: 
filters small 
solutes from 


the blood 
6. Collecting 
duct: 
reabsorbs 
solutes and 
water from 
the filtrate 
4. Ascending loop 3. Descending 
of Henle: loop of Henle: 
reabsorbs Na* and aquaporins 
CF from the filtrate allow water 


into the interstitial 


: to pass from 
fluid 


) the filtrate 
into the 
interstitial fluid 


Each part of the nephron performs 
a different function in filtering 


waste and maintaining 
homeostatic balance. (1) The 
glomerulus forces small solutes 
out of the blood by pressure. (2) 
The proximal convoluted tubule 
reabsorbs ions, water, and 
nutrients from the filtrate into the 
interstitial fluid, and actively 
transports toxins and drugs from 
the interstitial fluid into the 
filtrate. The proximal convoluted 
tubule also adjusts blood pH by 
selectively secreting ammonia 
(NH3) into the filtrate, where it 
reacts with H* to form NH,". The 
more acidic the filtrate, the more 
ammonia is secreted. (3) The 
descending loop of Henle is lined 
with cells containing aquaporins 
that allow water to pass from the 
filtrate into the interstitial fluid. 
(4) In the thin part of the 
ascending loop of Henle, Na* and 
Cl ions diffuse into the interstitial 
fluid. In the thick part, these same 
ions are actively transported into 
the interstitial fluid. Because salt 
but not water is lost, the filtrate 
becomes more dilute as it travels 
up the limb. (5) In the distal 
convoluted tubule, K* and H™ ions 
are selectively secreted into the 
filtrate, while Na‘, Cl’, and HCO3" 
ions are reabsorbed to maintain 
pH and electrolyte balance in the 
blood. (6) The collecting duct 
reabsorbs solutes and water from 


the filtrate, forming dilute urine. 
(credit: modification of work by 
NIDDK) 


Glomerular Filtration 


Glomerular filtration filters out most of the solutes due to high blood 
pressure and specialized membranes in the afferent arteriole. The blood 
pressure in the glomerulus is maintained independent of factors that affect 
systemic blood pressure. The “leaky” connections between the endothelial 
cells of the glomerular capillary network allow solutes to pass through 
easily. All solutes in the glomerular capillaries, except for macromolecules 
like proteins, pass through by passive diffusion. There is no energy 
requirement at this stage of the filtration process. Glomerular filtration 
rate (GFR) is the volume of glomerular filtrate formed per minute by the 
kidneys. GFR is regulated by multiple mechanisms and is an important 
indicator of kidney function. 


Tubular Reabsorption and Secretion 


Tubular reabsorption occurs in the PCT part of the renal tubule. Almost all 
nutrients are reabsorbed, and this occurs either by passive or active 
transport. Reabsorption of water and some key electrolytes are regulated 
and can be influenced by hormones. Sodium (Na’) is the most abundant ion 
and most of it is reabsorbed by active transport and then transported to the 
peritubular capillaries. Because Na’ is actively transported out of the 
tubule, water follows it to even out the osmotic pressure. Water is also 
independently reabsorbed into the peritubular capillaries due to the presence 
of aquaporins, or water channels, in the PCT. 


In the loop of Henle, the permeability of the membrane changes. The 
descending limb is permeable to water, not solutes; the opposite is true for 


the ascending limb. 


Note: 

Art Connection 
Filtrate enters the Filtrate exits the 
descending limb. ascending limb. 


Interstitial 
fluid 


Loop of 
Henle 


The loop of Henle acts as a 
countercurrent multiplier that 
uses energy to create 
concentration gradients. The 
descending limb is water 
permeable. Water flows from 
the filtrate to the interstitial 
fluid, so the concentration of 
solutes inside the limb 
increases as it descends into 
the renal medulla. At the 
bottom, the concentration of 
solutes is higher inside the 
loop than in the interstitial 
fluid. Thus, as filtrate enters 
the ascending limb, Na* and 
Cl ions exit through ion 


channels present in the cell 
membrane. Further up, Na” is 
actively transported out of the 
filtrate and Cl follows. The 
concentration of solutes is 
given in units of milliosmoles 
per liter. 


By the time the filtrate reaches the DCT, most of the water and solutes have 
been reabsorbed. If the body requires additional water, more of it can be 
reabsorbed at this point. Further reabsorption is controlled by hormones, 
which will be discussed in a later section. Excretion of wastes occurs due to 
lack of reabsorption combined with tubular secretion. Undesirable products 
like metabolic wastes, urea, uric acid, and certain drugs, are excreted by 
tubular secretion. Most of the tubular secretion happens in the DCT, but 
some occurs in the early part of the collecting duct. Kidneys also maintain 
an acid-base balance by secreting excess H" ions. 


Note: 

Career Connection 

Nephrologist 

A nephrologist studies and deals with diseases of the kidneys—both those 
that cause kidney failure (such as diabetes) and the conditions that are 
produced by kidney disease (such as hypertension). Blood pressure, blood 
volume, and changes in electrolyte balance come under the purview of a 
nephrologist. 

Nephrologists usually work with other physicians who refer patients to 
them or consult with them about specific diagnoses and treatment plans. 
Patients are usually referred to a nephrologist for symptoms such as blood 
or protein in the urine, very high blood pressure, kidney stones, or renal 
failure. 


Nephrology is a subspecialty of internal medicine. To become a 
nephrologist, medical school is followed by additional training to become 
certified in internal medicine. An additional two or more years is spent 
specifically studying kidney disorders and their accompanying effects on 
the body. 


Section Summary 


The kidneys are the main osmoregulatory organs in mammalian systems; 
they function to filter blood and maintain the correct concentration of 
solutes in body fluids. They are made up internally of three distinct regions 
—the cortex, medulla, and pelvis. 


The blood vessels that transport blood into and out of the kidneys arise from 
and merge with the aorta and inferior vena cava, respectively. The renal 
arteries branch out from the aorta and enter the kidney where they further 
divide. 


The nephron is the functional unit of the kidney, which actively filters blood 
and generates urine. The nephron is made up of the renal corpuscle and 
renal tubule. The nephron filters and exchanges water and solutes with two 
sets of blood vessels and the tissue fluid in the kidneys. 


There are three steps in the formation of urine: glomerular filtration, which 
occurs in the glomerulus; tubular reabsorption, which occurs in the renal 
tubules; and tubular secretion, which also occurs in the renal tubules. 


Art Connections 


Exercise: 


Problem: 
[link] Which of the following statements about the kidney is false? 


a. The renal pelvis drains into the ureter. 


b. The renal pyramids are in the medulla. 
c. The cortex covers the kidney. 
d. Nephrons are in the renal cortex. 


Solution: 


[link] C 
Exercise: 


Problem: 
[link] Which of the following statements about the nephron is false? 


a. The collecting duct empties into the distal convoluted tubule. 

b. The Bowman’s capsule surrounds the glomerulus. 

c. The loop of Henle is between the proximal and distal convoluted 
tubules. 

d. The loop of Henle empties into the distal convoluted tubule. 


Solution: 
[link] A 
Exercise: 


Problem: 
[link] Loop diuretics are drugs sometimes used to treat hypertension. 
These drugs inhibit the reabsorption of Na* and CI ions by the 


ascending limb of the loop of Henle. A side effect is that they increase 
urination. Why do you think this is the case? 


Solution: 


[link] Loop diuretics decrease the excretion of salt into the renal 
medulla, thereby reducing its concentration of solutes. As a result, less 


water is excreted into the medulla by the descending limb, and more 
water is excreted as urine. 


Review Questions 


Exercise: 
Problem: 
The gland located at the top of the kidney is the gland. 
a. adrenal 
b. pituitary 


c. thyroid 
d. thymus 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


Describe the three major regions of the kidney's internal structure. 
Solution: 
Internally, the kidney has three regions—an outer cortex, a medulla in 


the middle, and the renal pelvis in the region called the hilum of the 
kidney, which is the concave part of the “bean” shape. 


Glossary 


afferent arteriole 
arteriole that branches from the cortical radiate artery and enters the 
glomerulus 


arcuate artery 
artery that branches from the interlobar artery and arches over the base 
of the renal pyramids 


ascending limb 
part of the loop of Henle that ascends from the renal medulla to the 
renal cortex 


Bowman's capsule 
structure that encloses the glomerulus 


calyx 
structure that connects the renal pelvis to the renal medulla 


cortex (animal) 
outer layer of an organ like the kidney or adrenal gland 


cortical nephron 
nephron that lies in the renal cortex 


cortical radiate artery 
artery that radiates from the arcuate arteries into the renal cortex 


countercurrent exchanger 
peritubular capillary network that allows exchange of solutes and 
water from the renal tubules 


countercurrent multiplier 
osmotic gradient in the renal medulla that is responsible for 
concentration of urine 


descending limb 
part of the loop of Henle that descends from the renal cortex into the 
renal medulla 


distal convoluted tubule (DCT) 
part of the renal tubule that is the most distant from the glomerulus 


efferent arteriole 
arteriole that exits from the glomerulus 


glomerular filtration 
filtration of blood in the glomerular capillary network into the 
glomerulus 


glomerular filtration rate (GFR) 
amount of filtrate formed by the glomerulus per minute 


glomerulus (renal) 
part of the renal corpuscle that contains the capillary network 


hilum 
region in the renal pelvis where blood vessels, nerves, and ureters 
bunch before entering or exiting the kidney 


inferior vena cava 
one of the main veins in the human body 


interlobar artery 
artery that branches from the segmental artery and travels in between 
the renal lobes 


juxtaglomerular cell 
cell in the afferent and efferent arterioles that responds to stimuli from 
the macula densa 


juxtamedullary nephron 
nephron that lies in the cortex but close to the renal medulla 


kidney 
organ that performs excretory and osmoregulatory functions 


lobes of the kidney 
renal pyramid along with the adjoining cortical region 


loop of Henle 
part of the renal tubule that loops into the renal medulla 


macula densa 
group of cells that senses changes in sodium ion concentration; present 
in parts of the renal tubule and collecting ducts 


medulla 
middle layer of an organ like the kidney or adrenal gland 


nephron 
functional unit of the kidney 


perirenal fat capsule 
fat layer that suspends the kidneys 


peritubular capillary network 
capillary network that surrounds the renal tubule after the efferent 
artery exits the glomerulus 


proximal convoluted tubule (PCT) 
part of the renal tubule that lies close to the glomerulus 


renal artery 
branch of the artery that enters the kidney 


renal capsule 
layer that encapsulates the kidneys 


renal column 
area of the kidney through which the interlobar arteries travel in the 
process of supplying blood to the renal lobes 


renal corpuscle 
glomerulus and the Bowman's capsule together 


renal fascia 
connective tissue that supports the kidneys 


renal pelvis 
region in the kidney where the calyces join the ureters 


renal pyramid 
conical structure in the renal medulla 


renal tubule 
tubule of the nephron that arises from the glomerulus 


renal vein 
branch of a vein that exits the kidney and joins the inferior vena cava 


segmental artery 
artery that branches from the renal artery 


transport maximum 
maximum amount of solute that can be transported out of the renal 
tubules during reabsorption 


tubular reabsorption 
reclamation of water and solutes that got filtered out in the glomerulus 


tubular secretion 
process of secretion of wastes that do not get reabsorbed 


ureter 
urine-bearing tube coming out of the kidney; carries urine to the 
bladder 


urinary bladder 
structure that the ureters empty the urine into; stores urine 


urine 
filtrate produced by kidneys that gets excreted out of the body 


vasa recta 
peritubular network that surrounds the loop of Henle of the 
juxtamedullary nephrons 


Hormonal Control of Urine Concentration 
By the end of this section, you will be able to: 


e Describe how aldosterone and anti-diuretic hormone help control urine 
concentration 


While the kidneys operate to maintain osmotic balance and blood pressure 
in the body, they also act in concert with hormones. Hormones are small 
molecules that act as messengers within the body. Hormones are typically 
secreted from one cell and travel in the bloodstream to affect a target cell in 
another portion of the body. Different regions of the nephron bear 
specialized cells that have receptors to respond to chemical messengers and 
hormones. In this section, you will learn about two hormones, aldosterone 
and antidiuretic hormone, that control urine concentration. 


Aldosterone 


Aldosterone is a hormone synthesized by the adrenal cortex that affects 
urine concentration by regulating sodium levels in the blood. Almost all of 
the sodium in the blood is reclaimed by the renal tubules under the 
influence of aldosterone. Because sodium is always reabsorbed by active 
transport and water follows sodium to maintain osmotic balance, 
aldosterone manages not only sodium levels but also the water levels in 
urine. Aldosterone favors the production of a concentrated urine by the 
water following the reabsorbed sodium ions. A decrease in the secretion of 
aldosterone means that less sodium gets reabsorbed in the renal tubules; 
therefore, more of it gets excreted in the urine. Patients who have Addison's 
disease have a failing adrenal cortex and cannot produce aldosterone. They 
lose sodium in their urine constantly, and if the supply is not replenished, 
the consequences can be fatal. 


Antidiurectic Hormone 


Diuretics are drugs that can increase water loss by interfering with the 
recapture of solutes and water from the forming urine. They are often 
prescribed to lower blood pressure. Coffee, tea, and alcoholic beverages are 
familiar diuretics. Antidiuretic hormone or ADH, as the name suggests, 


helps the body conserve water when body fluid volume, especially that of 
blood, is low. It is formed by the hypothalamus and is stored and released 
from the posterior pituitary gland. It acts by inserting aquaporins, protein 
channels that allow water to leave, in the collecting ducts and promotes 
reabsorption of water. This action results in the formation of a concentrated 
urine. ADH also acts as a vasoconstrictor and increases blood pressure 
during hemorrhaging. 


Section Summary 
Hormonal cues help the kidneys synchronize the osmotic needs of the body. 
Hormones like aldosterone and anti-diuretic hormone (ADH) help regulate 


the needs of the body as well as the communication between the different 
organ systems. 


Review Questions 


Exercise: 


Problem: Aldosterone is made by 


a. the adrenal glands 

b. the hypothalamus 

c. the anterior pituitary gland 
d. the posterior pituitary gland 


Solution: 
A 
Exercise: 


Problem: Patients with Addison's disease 


a. retain water 
b. retain salts 


c. lose salts and water 
d. have too much aldosterone 


Solution: 


C 


Free Response 


Exercise: 


Problem: 


Describe how hormones regulate blood pressure, blood volume, and 
kidney function. 


Solution: 


Hormones are small molecules that act as messengers within the body. 
Different regions of the nephron bear specialized cells, which have 
receptors to respond to chemical messengers and hormones. The 
hormones carry messages to the kidney. These hormonal cues help the 
kidneys synchronize the osmotic needs of the body. Both ADH and 
aldosterone promote water reabsorption from the filtrate, which 
increases blood volume and blood pressure while also producing a 
concentrated urine. 


Glossary 


angiotensin converting enzyme (ACE) 
enzyme that converts angiotensin I to angiotensin II 


angiotensin I 
product in the renin-angiotensin-aldosterone pathway 


angiotensin II 


molecule that affects different organs to increase blood pressure 


anti-diuretic hormone (ADH) 
hormone that prevents the loss of water 


renin-angiotensin-aldosterone 
biochemical pathway that activates angiotensin II, which increases 
blood pressure 


vasodilator 
compound that increases the diameter of blood vessels 


vasopressin 
another name for anti-diuretic hormone 


Introduction to Cell Division 
class="introduction" 


A sea urchin 
begins life 
as a single 
cell that (a) 
divides to 

form two 
cells, visible 
by scanning 
electron 
microscopy. 
After four 
rounds of 
cell 

division, (b) 

there are 16 
cells, as 
seen in this 

SEM image. 
After many 
rounds of 

cell 
division, the 
individual 
develops 
into a 
complex, 
multicellula 

r organism, 
as seen in 

this (c) 
mature sea 
urchin. 
(credit a: 
modificatio 


n of work 
by Evelyn 
Spiegel, 
Louisa 
Howard; 
credit b: 
modificatio 
n of work 
by Evelyn 
Spiegel, 
Louisa 
Howard; 
credit c: 
modificatio 
n of work 
by Marco 
Busdraghi; 
scale-bar 
data from 


Matt 
Russell) 


(b) 


The individual sexually reproducing organism—including humans—begins 
life as a fertilized egg, or zygote. Trillions of cell divisions subsequently 
occur in a controlled manner to produce a complex, multicellular human. In 
other words, that original single cell was the ancestor of every other cell in 
the body. Once a human individual is fully grown, cell reproduction is still 


necessary to repair or regenerate tissues. For example, new blood and skin 
cells are constantly being produced. The type of cell division associated 
with these events is mitosis, which produces genetically-identical cells with 
two sets of chromosomes (i.e. diploid). However, Humans also have to be 
able to produce specialized cells for reproduction (i.e. gametes) that contain 
only one set of chromosomes (i.e. haploid). The type of cell division 
associated with gamete production is meiosis. 


Chromosomes and the Genome 
By the end of this section, you will be able to: 


e Describe the eukaryotic genome 
e Distinguish between chromosomes, genes, and traits 


The continuity of life from one cell to another has its foundation in the 
reproduction of cells by way of the cell cycle. The cell cycle is an orderly 
sequence of events in the life of a cell from the division of a single parent 
cell to produce two new daughter cells, to the subsequent division of those 
daughter cells. The mechanisms involved in the cell cycle are highly 
conserved across eukaryotes. 


Genomic DNA 


Before discussing the steps a cell undertakes to replicate, a deeper 
understanding of the structure and function of a cell’s genetic information is 
necessary. A complement of DNA in a gamete is referred to as the genome. 
A somatic cell (i.e. a cell with two sets of chromosomes) contains 2 copies 
of the genome - one from the mother's egg and one from the father's sperm. 
These two copies of the genome are found in the zygote. 


In eukaryotes, the genome comprises several double-stranded, linear DNA 
molecules ({link]) bound with proteins to form complexes called 
chromosomes. Each species of eukaryote has a characteristic number of 
chromosomes in the nuclei of its cells. Human body cells (somatic cells) 
have 46 chromosomes. A somatic cell contains two matched sets of 
chromosomes, a configuration known as diploid. The letter n is used to 
represent a single set of chromosomes; therefore a diploid organism is 
designated 2n. Human cells that contain one set of 23 chromosomes are 
called gametes, or sex cells; these eggs and sperm are designated n, or 
haploid. 


‘6 
6 7 8 9 10 11 12 
+f ih 
13 14 15 16 17 18 


19 20 21 22 X 


There are 23 pairs of homologous 
chromosomes in a female human 
somatic cell. These chromosomes 
are viewed within the nucleus 
(top), removed from a cell in 
mitosis (right), and arranged 
according to length (left) in an 
arrangement called a karyotype. In 
the karyotype, the first 22 pairs of 
chromosomes are called 
autosomes. The 23rd pair of 
chromosomes is called the sex 
chromosomes. A male has the sex 
chromosomes X and Y and the 
female has the sex chromosomes 
X and X. Therefore, the human 
karyotype shown is from a female. 
In this image, the chromosomes 
were exposed to fluorescent stains 
to distinguish them. (credit: “718 
Bot”/Wikimedia Commons, 
National Human Genome 
Research) 


The matched pairs of chromosomes in a diploid organism are called 
homologous chromosomes. Homologous chromosomes are the same 
length and have specific nucleotide segments called genes in exactly the 
same location, or loci; singular: locus. Genes, the functional units of 
chromosomes, determine specific characteristics by coding for specific 
proteins. Traits are the different forms of a characteristic. For example, the 
shape of earlobes is a characteristic with traits of free or attached. 


Each copy of the homologous pair of chromosomes originates from a 
different parent; therefore, the copies of each of the genes themselves may 
not be identical. The variation of individuals within a species is caused by 
the specific combination of the genes inherited from both parents. For 
example, there are three possible gene sequences on the human 
chromosome that codes for blood type: sequence A, sequence B, and 
sequence O. Because all diploid human cells have two copies of the 
chromosome that determines blood type, the blood type (the trait) is 
determined by which two versions of the marker gene are inherited. It is 
possible to have two copies of the same gene sequence, one on each 
homologous chromosome (for example, AA, BB, or OO), or two different 
sequences, such as AB. 


Minor variations in traits such as those for blood type, eye color, and height 
contribute to the natural variation found within a species. The sex 
chromosomes, X and Y, are the single exception to the rule of homologous 
chromosomes; other than a small amount of homology that is necessary to 
reliably produce gametes, the genes found on the X and Y chromosomes are 
not the same. 


Section Summary 


Eukaryotes have multiple, linear chromosomes surrounded by a nuclear 
membrane. Human somatic cells have 46 chromosomes consisting of two 
sets of 22 homologous chromosomes and a pair of nonhomologous sex 
chromosomes. This is the 2n, or diploid, state. Human gametes have 23 
chromosomes or one complete set of chromosomes. This is the n, or 
haploid, state. Genes are segments of DNA that code for a specific protein 
or RNA molecule. An organism’s traits are determined in large part by the 


genes inherited from each parent, but also by the environment that they 
experience. Genes are expressed as characteristics of the organism and each 
characteristic may have different variants called traits that are caused by 
differences in the DNA sequence for a gene. 


Multiple Choice 


Exercise: 
Problem: 


A diploid cell has the number of chromosomes as a haploid 
cell. 


a. one-fourth 
b. one-half 
c. twice 

d. four times 


Solution: 


CG 
Exercise: 
Problem: 


An organism’s traits are determined by the specific combination of 
inherited 


a. cells 

b. genes 

c. proteins 

d. chromatids 


Solution: 


Free Response 


Exercise: 


Problem: 
Compare and contrast a human somatic cell to a human gamete. 
Solution: 


Human somatic cells have 46 chromosomes, including 22 homologous 
pairs and one pair of nonhomologous sex chromosomes. This is the 2n, 
or diploid, condition. Human gametes have 23 chromosomes, one each 
of 23 unique chromosomes. This is the n, or haploid, condition. 


Glossary 


diploid 
describes a cell, nucleus, or organism containing two sets of 
chromosomes (2n) 


gamete 
a haploid reproductive cell or sex cell (sperm or egg) 


gene 
the physical and functional unit of heredity; a sequence of DNA that 
codes for a specific peptide or RNA molecule 


genome 
the entire genetic complement (DNA) of an organism 


haploid 
describes a cell, nucleus, or organism containing one set of 
chromosomes (n) 


homologous chromosomes 
chromosomes of the same length with genes in the same location; 
diploid organisms have pairs of homologous chromosomes, and the 
members of each pair come from different parents 


locus 
the position of a gene on a chromosome 


The Cell Cycle 
By the end of this section, you will be able to: 


e Describe the three stages of interphase 

e Discuss the behavior of chromosomes during mitosis and how the 
cytoplasmic content divides during cytokinesis 

e Define the quiescent Gp phase 

e Explain how the three internal control checkpoints occur at the end of 
Gj, at the G>—M transition, and during metaphase 


The cell cycle is an ordered series of events involving cell growth and cell 
division (i.e. Mitosis) that produces two new daughter cells. Cells on the 
path to cell division proceed through a series of precisely timed and 
carefully regulated stages of growth, DNA replication, and division that 
produce two genetically identical cells. The cell cycle has two major 
phases: interphase and the mitotic phase ({link]). During (interphase, the 
cell grows and DNA is replicated. During the mitotic phase, the replicated 
chromosomes separate (via mitosis), the cytoplasm divides (via cytokinesis, 
and the cell formally divides into two daughter cells. Watch this video about 
the cell cycle: https://www. youtube.com/watch?v=Wy3N5NCZBHQ 


Mitotic Phase 


Interphase 
Mitosis Formation 
Cytokinesis of 2 daughter 


cells 


Interphase Interphase 


A cell moves through a series of phases in an orderly 


manner. During interphase, G involves cell growth and 

protein synthesis, the S phase involves DNA replication 
and the replication of the centrosome, and G> involves 

further growth and protein synthesis. The mitotic phase 
follows interphase. Mitosis is nuclear division during 

which duplicated chromosomes are segregated and 
distributed into daughter nuclei. Usually the cell will 
divide after mitosis in a process called cytokinesis in 
which the cytoplasm is divided and two daughter cells 
are formed. 


Interphase 


During interphase, the cell undergoes normal processes while also preparing 
for cell division. For a cell to move from interphase to the mitotic phase, 
many internal and external conditions must be met. The three stages of 
interphase are called G, S, and Gp. 


G, Phase 


The first stage of interphase is called the G, phase, or first gap, because 
little change is visible. However, during the G, stage, the cell is quite active 
at the biochemical level. The cell is accumulating the building blocks of 
chromosomal DNA and the associated proteins, as well as accumulating 
enough energy reserves to complete the task of replicating each 
chromosome in the nucleus. 


S Phase 


Throughout interphase, nuclear DNA remains in a semi-condensed 
chromatin configuration. In the S phase (synthesis phase), DNA replication 
results in the formation of two identical copies of each chromosome—-sister 


chromatids—that are firmly attached at the centromere region. At this stage, 
each chromosome is made of two sister chromatids and is a duplicated 
chromosome. The centrosome is duplicated during the S phase. 


G> Phase 


In the Gy phase, or second gap, the cell replenishes its energy stores and 
synthesizes the proteins necessary for chromosome manipulation. Some cell 
organelles are duplicated, and the cytoskeleton is dismantled to provide 
resources for the mitotic spindle. There may be additional cell growth 
during Gp. The final preparations for the mitotic phase must be completed 
before the cell is able to enter the first stage of mitosis. 


The Mitotic Phase 


To make two daughter cells, the contents of the nucleus and the cytoplasm 
must be divided. The mitotic phase is a multistep process during which the 
duplicated chromosomes are aligned, separated, and moved to opposite 
poles of the cell, and then the cell is divided into two new identical daughter 
cells. The first portion of the mitotic phase, mitosis, is composed of five 
stages, which accomplish nuclear division. The second portion of the 
mitotic phase, called cytokinesis, is the physical separation of the 
cytoplasmic components into two daughter cells. 


Mitosis 


Mitosis is divided into a series of phases—prophase, prometaphase, 
metaphase, anaphase, and telophase—that result in the division of the cell 
nucleus ((Llink]). 


Note: 
Art Connection 


+ Animal cells: a 
cleavage furrow 
separates the 
daughter cells 


* Chromosomes 
arrive at opposite 
poles and begin 
to decondense 


* Chromosomes 
continue to 
condense 


* Chromosomes 
condense and 
become visible 


Mitotic spindle is | * Cohesin proteins 
fully developed, binding the sister 
centrosomes are} chromatids 

at opposite poles} together break 

* Kinetochores of the cell down 
appear at the 
centromeres 


* Spindle fibers 
emerge from the 
centrosomes 


* Nuclear envelope | « Plant cells: a cell 


Chromosomes * Sister chromatids} material 


* Nuclear envelope 
breaks down 


* Nucleolus 
disappears 


* Mitotic spindle 
microtubules 
attach to 
kinetochores 


* Centrosomes 
move toward 
opposite poles 


are lined up at 
the metaphase 
plate 


Each sister 
chromatid is 
attached toa 
spindle fiber 
originating from 


(now called 
chromosomes) 
are pulled toward 
opposite poles 


+ Non-kinetochore 


spindle fibers 
lengthen, 
elongating 
the cell 


surrounds 
each set of 
chromosomes 


* The mitotic 
spindle breaks 
down 


plate separates 
the daughter 
cells 


opposite poles 


MITOSIS 


Animal cell mitosis is divided into five stages—prophase, 
prometaphase, metaphase, anaphase, and telophase—visualized 
here by light microscopy with fluorescence. Mitosis is usually 
accompanied by cytokinesis, shown here by a transmission 
electron microscope. (credit "diagrams": modification of work 
by Mariana Ruiz Villareal; credit "mitosis micrographs": 
modification of work by Roy van Heesbeen; credit "cytokinesis 
micrograph": modification of work by the Wadsworth Center, 
NY State Department of Health; donated to the Wikimedia 
foundation; scale-bar data from Matt Russell) 


During prophase, the “first phase,” several events must occur to provide 
access to the chromosomes in the nucleus. The nuclear envelope starts to 


break into small vesicles, and the Golgi apparatus and endoplasmic 
reticulum fragment and disperse to the periphery of the cell. The nucleolus 
disappears. The centrosomes begin to move to opposite poles of the cell. 
The microtubules that form the basis of the mitotic spindle extend between 
the centrosomes, pushing them farther apart as the microtubule fibers 
lengthen. The sister chromatids begin to coil more tightly and become 
visible under a light microscope. 


During prometaphase, many processes that were begun in prophase 
continue to advance and culminate in the formation of a connection 
between the chromosomes and cytoskeleton. The remnants of the nuclear 
envelope disappear. The mitotic spindle continues to develop as more 
microtubules assemble and stretch across the length of the former nuclear 
area. Chromosomes become more condensed and visually discrete. Each 
sister chromatid attaches to spindle microtubules at the centromere via a 
protein complex called the kinetochore. 


During metaphase, all of the chromosomes are aligned in a plane called the 
metaphase plate, or the equatorial plane, midway between the two poles of 
the cell. The sister chromatids are still tightly attached to each other. At this 
time, the chromosomes are maximally condensed. 


During anaphase, the sister chromatids at the equatorial plane are split 
apart at the centromere. Each chromatid, now called a chromosome, is 
pulled rapidly toward the centrosome to which its microtubule was 
attached. The cell becomes visibly elongated as the non-kinetochore 
microtubules slide against each other at the metaphase plate where they 
overlap. 


During telophase, all of the events that set up the duplicated chromosomes 
for mitosis during the first three phases are reversed. The chromosomes 
reach the opposite poles and begin to decondense (unravel). The mitotic 
spindles are broken down into monomers that will be used to assemble 
cytoskeleton components for each daughter cell. Nuclear envelopes form 
around chromosomes. 


Cytokinesis 


Cytokinesis is the second part of the mitotic phase during which cell 
division is completed by the physical separation of the cytoplasmic 
components into two daughter cells. Although the stages of mitosis are 
similar for most eukaryotes, the process of cytokinesis is quite different for 
eukaryotes that have cell walls, such as plant cells. 


In cells such as animal cells that lack cell walls, cytokinesis begins 
following the onset of anaphase. A contractile ring composed of actin 
filaments forms just inside the plasma membrane at the former metaphase 
plate. The actin filaments pull the equator of the cell inward, forming a 
fissure. This fissure, or “crack,” is called the cleavage furrow. The furrow 
deepens as the actin ring contracts, and eventually the membrane and cell 
are cleaved in two ([link]). 


(a) Animal cell 


Cleavage 

furrow E> 

Contractile 

ring 

Cell 

2 ~ 


Golgi vesicles 


(b) Plant cell 


In part (a), a cleavage furrow forms at 
the former metaphase plate in the 
animal cell. The plasma membrane is 


drawn in by a ring of fibers 
contracting just inside the membrane. 
The cleavage furrow deepens until the 
cells are pinched in two. 


Section Summary 


The cell cycle is an orderly sequence of events. Cells on the path to cell 
division proceed through a series of precisely timed and carefully regulated 
stages. In eukaryotes, the cell cycle consists of a long preparatory period, 
called interphase. Interphase is divided into Gj, S, and G» phases. Mitosis 
consists of five stages: prophase, prometaphase, metaphase, anaphase, and 
telophase. Mitosis is usually accompanied by cytokinesis, during which the 
cytoplasmic components of the daughter cells are separated either by an 
actin ring (animal cells) or by cell plate formation (plant cells). 


Art Connections 


Exercise: 


Problem: 
[link] Which of the following is the correct order of events in mitosis? 


a. Sister chromatids line up at the metaphase plate. The kinetochore 
becomes attached to the mitotic spindle. The nucleus re-forms 
and the cell divides. The sister chromatids separate. 

b. The kinetochore becomes attached to the mitotic spindle. The 
sister chromatids separate. Sister chromatids line up at the 
metaphase plate. The nucleus re-forms and the cell divides. 

c. The kinetochore becomes attached to metaphase plate. Sister 
chromatids line up at the metaphase plate. The kinetochore breaks 
down and the sister chromatids separate. The nucleus re-forms 
and the cell divides. 


d. The kinetochore becomes attached to the mitotic spindle. Sister 
chromatids line up at the metaphase plate. The kinetochore breaks 
apart and the sister chromatids separate. The nucleus re-forms and 
the cell divides. 


Solution: 


[link] D. The kinetochore becomes attached to the mitotic spindle. 
Sister chromatids line up at the metaphase plate. The kinetochore 
breaks apart and the sister chromatids separate. The nucleus reforms 
and the cell divides. 


Multiple Choice 


Exercise: 


Problem: 
Chromosomes are duplicated during what portion of the cell cycle? 


a. G, phase 

b. S phase 

c. prophase 

d. prometaphase 


Solution: 


B 
Exercise: 


Problem: 


Separation of the sister chromatids is a characteristic of which stage of 
mitosis? 


a. prometaphase 


b. metaphase 
c. anaphase 
d. telophase 


Solution: 


C 
Exercise: 


Problem: 


The individual chromosomes become visible with a light microscope 
during which stage of mitosis? 


a. prophase 

b. prometaphase 
c. metaphase 

d. anaphase 


Solution: 


A 


Glossary 


anaphase 
the stage of mitosis during which sister chromatids are separated from 
each other 


cell cycle 
the ordered sequence of events that a cell passes through between one 
cell division and the next 


cell cycle checkpoints 


mechanisms that monitor the preparedness of a eukaryotic cell to 
advance through the various cell cycle stages 


cell plate 
a structure formed during plant-cell cytokinesis by Golgi vesicles 
fusing at the metaphase plate; will ultimately lead to formation of a 
cell wall to separate the two daughter cells 


centriole 
a paired rod-like structure constructed of microtubules at the center of 
each animal cell centrosome 


cleavage furrow 
a constriction formed by the actin ring during animal-cell cytokinesis 
that leads to cytoplasmic division 


cytokinesis 
the division of the cytoplasm following mitosis to form two daughter 
cells 


Go phase 
a cell-cycle phase distinct from the G, phase of interphase; a cell in Gg 
is not preparing to divide 


G, phase 
(also, first gap) a cell-cycle phase; first phase of interphase centered on 
cell growth during mitosis 


G> phase 
(also, second gap) a cell-cycle phase; third phase of interphase where 
the cell undergoes the final preparations for mitosis 


interphase 
the period of the cell cycle leading up to mitosis; includes G,, S, and 
G, phases; the interim between two consecutive cell divisions 


kinetochore 


a protein structure in the centromere of each sister chromatid that 
attracts and binds spindle microtubules during prometaphase 


metaphase plate 
the equatorial plane midway between two poles of a cell where the 
chromosomes align during metaphase 


metaphase 
the stage of mitosis during which chromosomes are lined up at the 
metaphase plate 


mitosis 
the period of the cell cycle at which the duplicated chromosomes are 
separated into identical nuclei; includes prophase, prometaphase, 
metaphase, anaphase, and telophase 


mitotic phase 
the period of the cell cycle when duplicated chromosomes are 
distributed into two nuclei and the cytoplasmic contents are divided; 
includes mitosis and cytokinesis 


mitotic spindle 
the microtubule apparatus that orchestrates the movement of 
chromosomes during mitosis 


prometaphase 
the stage of mitosis during which mitotic spindle fibers attach to 
kinetochores 


prophase 
the stage of mitosis during which chromosomes condense and the 
mitotic spindle begins to form 


quiescent 
describes a cell that is performing normal cell functions and has not 


initiated preparations for cell division 


S phase 


the second, or synthesis phase, of interphase during which DNA 
replication occurs 


telophase 
the stage of mitosis during which chromosomes arrive at opposite 
poles, decondense, and are surrounded by new nuclear envelopes 


Meiosis and Genetic Variation 
By the end of this section, you will be able to: 


¢ Describe the behavior of chromosomes during meiosis 

e Describe cellular events during meiosis 

e Explain the differences between meiosis and mitosis 

e Explain the mechanisms within meiosis that generate genetic variation 
among the products of meiosis 


Sexual reproduction requires fertilization, a union of two haploid cells (i.e. 
gametes) from two individual organisms. If those two cells each contain one 
set of chromosomes, then the resulting cell contains two sets of 
chromosomes (i.e. is diploid). The number of sets of chromosomes in a cell 
is called its ploidy level. Haploid cells contain one set of chromosomes. 
Cells containing two sets of chromosomes are called diploid. If the 
reproductive cycle is to continue, the diploid cell must somehow reduce its 
number of chromosome sets before fertilization can occur again, or there 
will be a continual doubling in the number of chromosome sets in every 
generation. So, in addition to fertilization, sexual reproduction includes a 
nuclear division, known as meiosis, that reduces the number of 
chromosome sets. Meiosis consists of two division events, called Meiosis I 
and Meiosis II. 


Most animals and plants are diploid, containing two sets of chromosomes; 
in each somatic cell (the nonreproductive cells of a multicellular organism), 
the nucleus contains two copies of each chromosome that are referred to as 
homologous chromosomes. Somatic cells are sometimes referred to as 
“body” cells. Homologous chromosomes are matched pairs containing 
genes for the same traits in identical locations along their length. Diploid 
organisms inherit one copy of each homologous chromosome from each 
parent; all together, they are considered a full set of chromosomes. In 
animals, haploid cells containing a single copy of each homologous 
chromosome are found only within gametes. Gametes fuse with another 
haploid gamete to produce a diploid cell. 


The nuclear division that forms haploid cells, which is called meiosis, is 
related to mitosis. As you have learned, mitosis is part of a cell reproduction 
cycle that results in identical daughter nuclei that are also genetically 


identical to the original parent nucleus. In mitosis, both the parent and the 
daughter nuclei contain the same number of chromosome sets—diploid for 
most plants and animals. Meiosis employs many of the same mechanisms 
as mitosis. However, the starting nucleus is always diploid and the nuclei 
that result at the end of a meiotic cell division are haploid (n). To achieve 
the reduction in chromosome number, meiosis consists of one round of 
chromosome duplication and two rounds of nuclear division. Because the 
events that occur during each of the division stages are analogous to the 
events of mitosis, the same stage names are assigned. However, because 
there are two rounds of division, the stages are designated with a “I” or “II.” 
Thus, meiosis I is the first round of meiotic division and consists of 
prophase I, prometaphase I, and so on. Meiosis I reduces the number of 
chromosome sets from two to one (i.e. reductional division). The genetic 
information is also mixed during this division to create unique recombinant 
chromosomes. Meiosis II, in which the second round of meiotic division 
takes place in a way that is similar to mitosis, includes prophase II, 
prometaphase II, and so on. Meiosis II produces daughter cells that are 
haploid in chromosome number (as in Meiosis I), but with the sister 
chromatids separated. In other words, there is no further reduction in 
chromosome number, thus it is also called equational division. 


Interphase 


Meiosis is preceded by an interphase consisting of the Gj, S, and Gp phases, 
which are nearly identical to the phases preceding mitosis. The G, phase is 
the first phase of interphase and is focused on cell growth. In the S phase, 
the DNA of the chromosomes is replicated. Finally, in the G» phase, the cell 
undergoes the final preparations for meiosis. 


During DNA duplication of the S phase, each chromosome becomes 
composed of two identical copies (called sister chromatids) that are held 
together at the centromere until they are pulled apart during meiosis II. 
Again, homologous chromosome pairs separate in meiosis I (i.e. reductional 
division) and sister chromatids separate during meiosis II (i.e. equational 
division). 


Meiosis I 


Early in prophase I, the chromosomes can be seen clearly microscopically. 
As the nuclear envelope begins to break down, the proteins associated with 
homologous chromosomes bring the pair close to each other. The tight 
pairing of the homologous chromosomes is called synapsis. In synapsis, the 
genes on the chromatids of the homologous chromosomes are precisely 
aligned with each other. An exchange of chromosome segments between 
non-sister homologous chromatids occurs and is called crossing over. This 
process is revealed visually after the exchange as chiasmata (singular = 
chiasma) ((link]). As will be discussed later, crossing over can result in 
genetic variability in the gametes. 


As prophase I progresses, the close association between homologous 
chromosomes begins to break down, and the chromosomes continue to 
condense, although the homologous chromosomes remain attached to each 
other at chiasmata. The number of chiasmata varies with the species and the 
length of the chromosome. At the end of prophase I, the pairs are held 
together only at chiasmata ((link]) and are called tetrads because the four 
sister chromatids of each pair of homologous chromosomes are now visible. 


The crossover events are the first source of genetic variation produced by 
meiosis. A single crossover event between homologous non-sister 
chromatids leads to a reciprocal exchange of equivalent DNA between a 
maternal chromosome and a paternal chromosome. Now, when that sister 
chromatid is moved into a gamete, it will carry some DNA from one parent 
of the individual and some DNA from the other parent. The recombinant 
sister chromatid has a combination of maternal and paternal genes that did 
not exist before the crossover. It is important to note that crossing over will 
only produce genetic diversity if there was diversity between the maternal 
and paternal chromosomes. 


Homologous Chromosome 
chromosomes crossover 
aligned 


Recombinant 
chromosomes 


Non-recombinant 
chromosomes 


In this illustration of the effects 
of crossing over, the blue 
chromosome came from the 
individual’s father and the red 
chromosome came from the 
individual’s mother. Crossover 
occurs between non-sister 
chromatids of homologous 
chromosomes. The result is an 
exchange of genetic material 
between homologous 
chromosomes. The 
chromosomes that have a 
mixture of maternal and 
paternal sequence that differ 
genetically are called 
recombinant and the 
chromosomes that are 


completely paternal or maternal 
are called non-recombinant. 
Note: Crossing over can occur 
several times between the same 
pair of homologous 
chromosomes. 


During metaphase I, the homologous chromosomes are arranged in the 
center of the cell with the kinetochores facing opposite poles. The 
orientation of each pair of homologous chromosomes at the center of the 
cell is random. As is discussed later, this too can contribute to genetic 
variation in the gametes. 


This randomness, called independent assortment, is the physical basis for 
the generation of the second form of genetic variation in offspring. Consider 
that the homologous chromosomes of a sexually reproducing organism are 
originally inherited as two separate sets, one from each parent. Using 
humans as an example, one set of 23 chromosomes is present in the egg 
donated by the mother. The father provides the other set of 23 chromosomes 
in the sperm that fertilizes the egg. In metaphase I, these pairs line up at the 
midway point between the two poles of the cell. Because there is an equal 
chance that a microtubule fiber will encounter a maternally or paternally 
inherited chromosome, the arrangement of the tetrads at the metaphase plate 
is random. Any maternally inherited chromosome may face either pole. 
Any paternally inherited chromosome may also face either pole. The 
orientation of each tetrad is independent of the orientation of the other 22 
tetrads. 


In each cell that undergoes meiosis, the arrangement of the tetrads is 
different. The number of variations depends on the number of chromosomes 
making up a set. There are two possibilities for orientation (for each tetrad); 
thus, the possible number of alignments equals 2” where n is the number of 
chromosomes per set. Humans have 23 chromosome pairs, which results in 
over eight million (27°) possibilities. This number does not include the 
variability previously created in the sister chromatids by crossover. Given 


these two mechanisms, it is highly unlikely that any two haploid cells 
resulting from meiosis will have the same genetic composition ({link]). 


To summarize the genetic consequences of meiosis I: the maternal and 
paternal genes are recombined by crossover events occurring on each 
homologous pair during prophase I; in addition, the random assortment of 
tetrads at metaphase produces a unique combination of maternal and 
paternal chromosomes that will make their way into the gametes. 


Metaphase II 


Gametes 


Chromosome Arrangement 1 


arrangement 2 


Metaphase II 


Genetic Genetic 
arrangement 3 arrangement 4 


To demonstrate random, independent assortment at 
metaphase I, consider a cell with n = 2. In this 
case, there are two possible arrangements at the 
equatorial plane in metaphase I, as shown in the 
upper cell of each panel. These two possible 
orientations lead to the production of genetically 
different gametes. With more chromosomes, the 


i 
i 
i 


number of possible arrangements increases 
dramatically. 


In anaphase I, the spindle fibers pull the linked chromosomes apart. The 
sister chromatids remain tightly bound together at the centromere. It is the 
chiasma connections that are broken in anaphase I as the fibers attached to 
the fused kinetochores pull the homologous chromosomes apart ((link]). 


In telophase I, the separated chromosomes arrive at opposite poles. The 
remainder of the typical telophase events may or may not occur depending 
on the species. In some organisms, the chromosomes decondense and 
nuclear envelopes form around the chromatids in telophase I. 


Cytokinesis, the physical separation of the cytoplasmic components into 
two daughter cells, occurs without reformation of the nuclei in other 
organisms. In nearly all animals, cytokinesis separates the cell contents by a 
cleavage furrow. At each pole, there is just one member of each pair of the 
homologous chromosomes, so only one full set of the chromosomes is 
present. This is why the cells are considered haploid—there is only one 
chromosome set, even though there are duplicate copies of the set because 
each homolog still consists of two sister chromatids that are still attached to 
each other. However, although the sister chromatids were once duplicates of 
the same chromosome, they are no longer identical at this stage because of 
crossovers. 


Note: 
Concept in Action 


ee 


openstax COLLEGE 


Review the process of meiosis, observing how chromosomes align and 
migrate, at this site. 


Meiosis II 


In meiosis II, the connected sister chromatids remaining in the haploid cells 
from meiosis I will be split to form four haploid cells. In some species, cells 
enter a brief interphase, or interkinesis, that lacks an S phase, before 
entering meiosis II. Chromosomes are not duplicated during interkinesis. 
The two cells produced in meiosis I go through the events of meiosis IT in 
synchrony. Overall, meiosis II resembles the mitotic division of a haploid 
cell. 


In prophase II, if the chromosomes decondensed in telophase I, they 
condense again. If nuclear envelopes were formed, they fragment into 
vesicles. The centrosomes duplicated during interkinesis move away from 
each other toward opposite poles, and new spindles are formed. In 
prometaphase II, the nuclear envelopes are completely broken down, and 
the spindle is fully formed. Each sister chromatid forms an individual 
kinetochore that attaches to microtubules from opposite poles. In metaphase 
II, the sister chromatids are maximally condensed and aligned at the center 
of the cell. In anaphase II, the sister chromatids are pulled apart by the 
spindle fibers and move toward opposite poles. 


Prometaphase | Anaphase | 


a | Homologous pairs of 

~ Homologous — chromosomes are pulled 

_ pairs of apart by microtubules 
chromosomes { attached to the kinetochore. 


| are held 
together at the 
chiasmata. 


MEIOSIS | 


View nines attach | Sister chromatids | 
to the fused kinetochores remain attached at 
of the sister chromatids. _ the centromere. 


Prometaphase II Anaphase II 


‘Sister chromatids are 
pulled apart by microtubules 
| attached to — kinetochore. 


"Sister chromatids 
are held together 
_ at the centromere. 


Microtubules attach to the 
individual kinetochores of 
the sister chromatids. 


In prometaphase I, microtubules attach to the fused 
kinetochores of homologous chromosomes. In 
anaphase I, the homologous chromosomes are 

separated. In prometaphase II, microtubules attach 

to individual kinetochores of sister chromatids. In 
anaphase II, the sister chromatids are separated. 


In telophase II, the chromosomes arrive at opposite poles and begin to 
decondense. Nuclear envelopes form around the chromosomes. Cytokinesis 
separates the two cells into four genetically unique haploid cells. At this 
point, the nuclei in the newly produced cells are both haploid and have only 
one copy of the single set of chromosomes. The cells produced are 
genetically unique because (assuming there was parental genetic variation) 
of the random assortment of paternal and maternal homologs and because 
of the recombination of maternal and paternal segments of chromosomes— 
with their sets of genes—that occurs during crossover. 


Comparing Meiosis and Mitosis 


Mitosis and meiosis, which are both forms of division of the nucleus in 
eukaryotic cells, share some similarities, but also exhibit distinct differences 
that lead to their very different outcomes. Mitosis is a single nuclear 
division that results in two nuclei, usually partitioned into two new cells. 
The nuclei resulting from a mitotic division are genetically identical to the 
original. They have the same number of sets of chromosomes: one in the 
case of haploid cells, and two in the case of diploid cells. On the other hand, 
meiosis is two nuclear divisions that result in four nuclei, usually 
partitioned into four new cells. The nuclei resulting from meiosis are never 
genetically identical, and they contain one chromosome set only—this is 
half the number of the original cell, which was diploid ((link]). 


The differences in the outcomes of meiosis and mitosis occur because of 
differences in the behavior of the chromosomes during each process. Most 
of these differences in the processes occur in meiosis I, which is a very 
different nuclear division than mitosis. In meiosis I, the homologous 
chromosome pairs become associated with each other, are bound together, 
experience chiasmata and crossover between sister chromatids, and line up 
along the metaphase plate in tetrads with spindle fibers from opposite 
spindle poles attached to each kinetochore of a homolog in a tetrad. All of 
these events occur only in meiosis I, never in mitosis. 


Homologous chromosomes move to opposite poles during meiosis I so the 
number of sets of chromosomes in each nucleus-to-be is reduced from two 
to one. For this reason, meiosis I is referred to as a reduction division. 
There is no such reduction in ploidy level in mitosis. 


Meiosis II is much more analogous to a mitotic division. In this case, 
duplicated chromosomes (only one set of them) line up at the center of the 
cell with divided kinetochores attached to spindle fibers from opposite 
poles. During anaphase II, as in mitotic anaphase, the kinetochores divide 
and one sister chromatid is pulled to one pole and the other sister chromatid 
is pulled to the other pole. If it were not for the fact that there had been 
crossovers, the two products of each meiosis IT division would be identical 
as in mitosis; instead, they are different because there has always been at 
least one crossover per chromosome. Meiosis II is not a reduction division 
because, although there are fewer copies of the genome in the resulting 


cells, there is still one set of chromosomes, as there was at the end of 
meiosis I. 


Cells produced by mitosis will function in different parts of the body as a 
part of growth or replacing dead or damaged cells. Cells produced by 
meiosis in animals will only participate in sexual reproduction. 


HAPLOID CELLS 


Meiosis | Meiosis II Cytokinesis 


Prometaphase | Anaphase | 


Prophase | Metaphase | Telophase | G R 


( is / 
Cytokinesis @ 


DIPLOID CELLS 


DNA Synapsis of Crossover Homologous Sister chromatids Number 

synthesis homologous chromosomes line up at and genetic 
chromosomes line up at metaphase plate composition of 

metaphase plate daughter cells 
Occurs in S phase During During During During Four haploid 
of interphase prophase | prophase | metaphase | metaphase II cells at the end 
of meiosis II 

Occurs in S phase Does not Does not Does not During Two diploid 

of interphase occur occur occur metaphase cells at the end 
in mitosis in mitosis in mitosis of mitosis 


Meiosis and mitosis are both preceded by one 
round of DNA replication; however, meiosis 
includes two nuclear divisions. The four daughter 
cells resulting from meiosis are haploid and 
genetically distinct. The daughter cells resulting 
from mitosis are diploid and identical to the parent 
cell. 


Note: 
Concept in Action 


oO) 


openstax COLLEGE” 


: 
a7 


a 


For an animation comparing mitosis and meiosis, go to this website. 


Section Summary 


Sexual reproduction requires that diploid organisms produce haploid cells 
that can fuse during fertilization to form diploid offspring. The process that 
results in haploid cells is called meiosis. Meiosis is a series of events that 
arrange and separate chromosomes into daughter cells. During the 
interphase of meiosis, each chromosome is duplicated. In meiosis, there are 
two rounds of nuclear division resulting in four nuclei and usually four 
haploid daughter cells, each with half the number of chromosomes as the 
parent cell. During meiosis, variation in the daughter nuclei is introduced 
because of crossover in prophase I and random alignment at metaphase I. 
The cells that are produced by meiosis are genetically unique. 


Meiosis and mitosis share similarities, but have distinct outcomes. Mitotic 
divisions are single nuclear divisions that produce daughter nuclei that are 
genetically identical and have the same number of chromosome sets as the 
original cell. Meiotic divisions are two nuclear divisions that produce four 
daughter nuclei that are genetically different and have one chromosome set 
rather than the two sets the parent cell had. The main differences between 
the processes occur in the first division of meiosis. The homologous 
chromosomes separate into different nuclei during meiosis I causing a 
reduction of ploidy level. The second division of meiosis is much more 
similar to a mitotic division. 


Multiple Choice 


Exercise: 


Problem: Meiosis produces daughter cells. 


a. two haploid 
b. two diploid 
c. four haploid 
d. four diploid 


Solution: 


C 
Exercise: 


Problem: 


At which stage of meiosis are sister chromatids separated from each 
other? 


a. prophase I 
b. prophase II 
c. anaphase I 
d. anaphase II 


Solution: 
D 
Exercise: 


Problem: The part of meiosis that is similar to mitosis is 


a. meiosis | 
b. anaphase I 


c. meiosis II 
d. interkinesis 
Solution: 


C 
Exercise: 


Problem: 


If a muscle cell of a typical organism has 32 chromosomes, how many 
chromosomes will be in a gamete of that same organism? 


Solution: 


B 


Free Response 


Exercise: 
Problem: 
Explain how the random alignment of homologous chromosomes 
during metaphase I contributes to variation in gametes produced by 
meiosis. 


Solution: 


Random alignment leads to new combinations of traits. The 
chromosomes that were originally inherited by the gamete-producing 


individual came equally from the egg and the sperm. In metaphase I, 
the duplicated copies of these maternal and paternal homologous 
chromosomes line up across the center of the cell to form a tetrad. The 
orientation of each tetrad is random. There is an equal chance that the 
maternally derived chromosomes will be facing either pole. The same 
is true of the paternally derived chromosomes. The alignment should 
occur differently in almost every meiosis. As the homologous 
chromosomes are pulled apart in anaphase I, any combination of 
maternal and paternal chromosomes will move toward each pole. The 
gametes formed from these two groups of chromosomes will have a 
mixture of traits from the individual’s parents. Each gamete is unique. 


Exercise: 


Problem: 


In what ways is meiosis II similar to and different from mitosis of a 
diploid cell? 


Solution: 


The two divisions are similar in that the chromosomes line up along 
the metaphase plate individually, meaning unpaired with other 
chromosomes (as in meiosis I). In addition, each chromosome consists 
of two sister chromatids that will be pulled apart. The two divisions are 
different because in meiosis II there are half the number of 
chromosomes that are present in a diploid cell of the same species 
undergoing mitosis. This is because meiosis I reduced the number of 
chromosomes to a haploid state. 


Glossary 


chiasmata 
(singular = chiasma) the structure that forms at the crossover points 
after genetic material is exchanged 


crossing over 


(also, recombination) the exchange of genetic material between 
homologous chromosomes resulting in chromosomes that incorporate 
genes from both parents of the organism forming reproductive cells 


fertilization 
the union of two haploid cells typically from two individual organisms 


interkinesis 
a period of rest that may occur between meiosis I and meiosis II; there 
is no replication of DNA during interkinesis 


meiosis | 
the first round of meiotic cell division; referred to as reduction division 
because the resulting cells are haploid 


meiosis II 
the second round of meiotic cell division following meiosis I; sister 
chromatids are separated from each other, and the result is four unique 
haploid cells 


recombinant 
describing something composed of genetic material from two sources, 
such as a chromosome with both maternal and paternal segments of 
DNA 


reduction division 
a nuclear division that produces daughter nuclei each having one-half 
as many chromosome sets as the parental nucleus; meiosis I is a 
reduction division 


somatic cell 
all the cells of a multicellular organism except the gamete-forming 
cells 


synapsis 
the formation of a close association between homologous 
chromosomes during prophase I 


tetrad 
two duplicated homologous chromosomes (four chromatids) bound 
together by chiasmata during prophase I 


Introduction to the Reproductive Systems 
class="introduction" 
Ovulation 


Following 
a surge of 
luteinizin 
g 
hormone 
(LH), an 
oocyte 
(immature 
egg cell) 
will be 
released 
into the 
uterine 
tube, 
where it 
will then 
be 
available 
to be 
fertilized 
bya 
male’s 
sperm. 
Ovulation 
marks the 
end of the 
follicular 
phase of 
the 
ovarian 
cycle and 
the start 
of the 


luteal 
phase. 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


e Describe the anatomy of the male and female reproductive systems, 
including their accessory structures 

e Explain the role of hypothalamic and pituitary hormones in male and 
female reproductive function 

e Trace the path of a sperm cell from its initial production through 
fertilization of an oocyte 

e Explain the events in the ovary prior to ovulation 


Small, uncoordinated, and slick with amniotic fluid, a newborn encounters 
the world outside of her mother’s womb. We do not often consider that a 
child’s birth is proof of the healthy functioning of both her mother’s and 
father’s reproductive systems. Moreover, her parents’ endocrine systems 
had to secrete the appropriate regulating hormones to induce the production 
and release of unique male and female gametes, reproductive cells 
containing the parents’ genetic material (one set of 23 chromosomes). Her 
parent’s reproductive behavior had to facilitate the transfer of male gametes 
—the sperm—to the female reproductive tract at just the right time to 
encounter the female gamete, an oocyte (egg). Finally, combination of the 
gametes (fertilization) had to occur, followed by implantation and 
development. In this chapter, you will explore the male and female 
reproductive systems, whose healthy functioning can culminate in the 
powerful sound of a newborn’s first cry. 


Male Reproductive Anatomy and Physiology 
By the end of this section, you will be able to: 


e Describe human male reproductive anatomy (structures and functions) 
e Describe spermatogenesis a 

e Describe the role of hormones in human reproduction 

e Describe the roles of male reproductive hormones 


Human Reproductive Anatomy 


The reproductive tissues of male and female humans develop similarly in 
utero until about the seventh week of gestation when a low level of the 
hormone testosterone is released from the gonads of the developing male. 
Testosterone causes the primitive gonads to differentiate into male sexual 
organs. When testosterone is absent, the primitive gonads develop into 
ovaries. Tissues that produce a penis in males produce a clitoris in females. 
The tissue that will become the scrotum in a male becomes the labia in a 
female. Thus the male and female anatomies arise from a divergence in the 
development of what were once common embryonic structures. 


Male Reproductive Anatomy 


Proper development of sperm cells requires a temperature slightly lower 
than the normal body temperature; therefore, the pair of testes must be 
suspended outside the pelvic cavity (in the scrotum) so the environment of 
the sperm is about 2 °C lower than body temperature. If the testes do not 
descend through the abdominal cavity during fetal development, the 
individual has reduced fertility. 


The scrotum houses the testicles or testes (singular: testis), and provides 
passage for blood vessels, nerves, and muscles related to testicular function. 
The testes are a pair of male gonads that produce sperm and reproductive 
hormones. Coiled in each testis are seminiferous tubules, where sperm 
production begins. 


The penis drains urine from the urinary bladder and is a copulatory organ 
during intercourse ([link]; [link]). The penis contains three tubes of erectile 
tissue that become engorged with blood, making the penis erect, in 
preparation for intercourse. The organ is inserted into the vagina 
culminating with an ejaculation. During orgasm, the accessory organs and 
glands connected to the testes contract and empty the semen (containing 
sperm) into the urethra and the fluid is expelled from the body by muscular 
contractions causing ejaculation. After intercourse, the blood drains from 
the erectile tissue and the penis becomes flaccid. 


Semen is a mixture of sperm (about five percent of the total) and fluids 
from accessory glands (prostate, bulbourethral glands, and seminal vesicles) 
that contribute most of the semen’s volume. Sperm are haploid cells, 
consisting of a flagellum for movement, a neck that contains the cell’s 
energy-producing mitochondria, and a head that contains the genetic 
material ({link]). An acrosome (acrosomal vesicle) is found at the top of the 
head of the sperm. This structure contains enzymes that can digest the 
protective coverings that surround the egg and allow the sperm to fuse with 
the egg. An ejaculate will contain from two to five milliliters of fluid and 
from 50—120 million sperm per milliliter. 


As seen in this scanning electron 
micrograph, human sperm has a 
flagellum, neck, and head. (credit: 
scale-bar data from Matt Russell) 


Sperm cell formation begins in the walls of seminiferous tubules that are 
coiled inside the testes ([link]; [link]). The walls of the seminiferous tubules 
are made up of the developing sperm cells, with the least developed sperm 
at the periphery of the tubule; the cells get pushed closer to the lumen as 
maturation continues. The sperm cells are associated with Sertoli cells that 
nourish and promote the development of the sperm. Other cells present 
between the walls of the tubules are the Leydig/interstitial cells, which 
produce testosterone once the male reaches puberty. 


When the sperm have developed flagella they leave the seminiferous 
tubules and enter the epididymis ([link]; [link]). This structure lies along the 
top and back side of the testes and is the site of sperm maturation. The 
sperm leave the epididymis and enter the vas deferens, which carries the 
sperm behind the bladder, and forms the ejaculatory duct with the duct from 
the seminal vesicles. During a vasectomy, a section of the vas deferens is 
removed, preventing sperm (but not the secretions of the accessory glands) 
from being passed out of the body during ejaculation and preventing 
fertilization. Although a vasectomy is in many cases reversible via surgery, 
it is still considered to be a permanent procedure. 


The bulk of the semen comes from the accessory glands associated with the 
male reproductive system. These are the seminal vesicles, the prostate 
gland, and the bulbourethral gland ((link]; [link]). The secretions from 
the accessory glands provide important compounds for the sperm including 
nutrients, electrolytes, and pH buffering. 


Note: 
Art Connection 


Pubic bone Bladder Seminal vesicle 


Corpus Ejaculatory 
cavernosum duct 
Prostate 
Corpus 
spongiosum | gland 
erie 6 cae Rectum 
—~ff | . J Bulbourethral 
Urethra — gland 
Foreskin { ry Anus 
Glans ~\ Vas deferens 
Urethral Epididymis 


Testis 


Opening Scrotum 


Seminiferous tubules 


The reproductive structures of the human male are 
shown. 


Male Reproductive Anatomy 
Organ Location Function 


Supports testes and regulates 


Scrotum External 
their temperature 


Penis External Delivers urine, copulating organ 


Male Reproductive Anatomy 


Organ Location Function 

re invanaal Produce sperm and male 
hormones 

Seminal : ; 

Internal Contribute to semen production 

Vesicles 

Prostate Gland Internal Contributes to semen production 

Bulbourethtral a 

orem Internal Neutralize urine in urethra 
Glands 


Gametogenesis: Spermatogenesis 


Gametogenesis, the production of sperm and eggs, involves the process of 
meiosis. During meiosis, two nuclear divisions separate the paired 
chromosomes in the nucleus and then separate the chromatids that were 
made during an earlier stage of the cell’s life cycle. Meiosis and its 
associated cell divisions produces haploid (n) cells with half of each pair of 
chromosomes normally found in diploid (2n)cells. The production of sperm 
is called spermatogenesis. 


Spermatogenesis 


Spermatogenesis occurs in the wall of the seminiferous tubules, with the 
most primitive cells at the periphery of the tube and the most mature sperm 
at the lumen of the tube ([Llink]). Immediately under the capsule of the 
tubule are diploid, undifferentiated cells. These stem cells, each called a 
spermatogonium (pl. spermatogonia), go through mitosis to produce one 
cell that remains as a stem cell and a second cell called a primary 
spermatocyte that will undergo meiosis to produce sperm. 


The diploid primary spermatocyte goes through meiosis I to produce two 
haploid cells called secondary spermatocytes. Each secondary spermatocyte 
divides after meiosis II to produce two cells called spermatids. The 
spermatids eventually reach the lumen of the tubule and grow a flagellum, 


becoming sperm cells. Four sperm result from each primary spermatocyte 
that goes through meiosis. 


Spermatogonium 
CT | csi 


@ Primary spermatocyte 


| Meiosis | 
(an) (an) Secondary spermatocyte 


Meiosis Il 


@ @ @ Onn 


[soon 


' t rr 


<—_— 


During spermatogenesis, four 
sperm result from each 
primary spermatocyte. The 
process also maps onto the 
physical structure of the wall 
of the seminiferous tubule, 
with the spermatogonia on 
the outer side of the tubule, 
and the sperm with their 
developing tails extended 


into the lumen of the tubule. 
The process takes 
approximately 70 days. 


Note: 
Concept in Action 


ne 


mess" OPenstax COLLEGE 


Visit this site to see the process of spermatogenesis. 


Hormonal Control of Reproduction 


The human male and female reproductive cycles are controlled by the 
interaction of hormones from the hypothalamus and anterior pituitary with 
hormones from reproductive tissues and organs. In both sexes, the 
hypothalamus monitors and causes the release of hormones from the 
anterior pituitary gland. When the reproductive hormone is required, the 
hypothalamus sends a gonadotropin-releasing hormone (GnRH) to the 
anterior pituitary. This causes the release of follicle stimulating hormone 
(FSH) and luteinizing hormone (LH) from the anterior pituitary into the 
blood. Although these hormones are named after their functions in female 
reproduction, they are produced in both sexes and play important roles in 
controlling reproduction. Other hormones have specific functions in the 
male and female reproductive systems. 


Male Hormones 


At the onset of puberty, the hypothalamus causes the release of FSH and 
LH into the male system for the first time. FSH enters the testes and 
stimulates the Sertoli cells located in the walls of the seminiferous tubules 
to begin promoting spermatogenesis ([link]). LH also enters the testes and 
stimulates the interstitial cells of Leydig, located in between the walls of the 


seminiferous tubules, to make and release testosterone into the testes and 
the blood. 


Testosterone stimulates spermatogenesis. This hormone is also responsible 
for the secondary sexual characteristics that develop in the male during 
adolescence. The secondary sex characteristics in males include a 
deepening of the voice, the growth of facial, axillary, and pubic hair, an 
increase in muscle bulk, and the beginnings of the sex drive. 


Pituitary hormone effects: [Hypothalamus | 
LH and FSH stimulate spermatogenesis 


and testosterone secretion by the testes. y GnRH 


Inhibin 


LH FSH Testosterone 


Testes hormone effects: 
Testosterone and inhibin inhibit 
the secretion of GnRH by the 
hypothalamus and LH and FSH 
by the pituitary. 


Sertoli cells facilitate 
spermatogenesis 
Leydig cells 


Hormones control sperm production in a negative feedback system. 


A negative feedback system occurs in the male with rising levels of 
testosterone acting on the hypothalamus and anterior pituitary to inhibit the 
release of GnRH, FSH, and LH. In addition, the Sertoli cells produce the 


hormone inhibin, which is released into the blood when the sperm count is 
too high. This inhibits the release of GnRH and FSH, which will cause 
spermatogenesis to slow down. If the sperm count reaches a low of 20 
million/mL, the Sertoli cells cease the release of inhibin, and the sperm 
count increases. 


Section Summary 


The reproductive structures that evolved in land animals allow males and 
females to mate, fertilize internally, and support the growth and 
development of offspring. Gametogenesis, the production of sperm in the 
male (spermatogenesis), takes place through the process of meiosis. 


The male and female reproductive cycles are controlled by hormones 
released from the hypothalamus and anterior pituitary and hormones from 
reproductive tissues and organs. The hypothalamus monitors the need for 
FSH and LH production and release from the anterior pituitary. FSH and 
LH affect reproductive structures to cause the formation of sperm and the 
preparation of eggs for release and possible fertilization. In the male, FSH 
and LH stimulate Sertoli cells and interstitial cells of Leydig in the testes to 
facilitate sperm production. The Leydig cells produce testosterone, which 
also is responsible for the secondary sexual characteristics of males. In 
females, FSH and LH cause estrogen and progesterone to be produced. 
They regulate the female reproductive cycle, which is divided into the 
ovarian cycle and the menstrual cycle. 


Art Connections 


Exercise: 


Problem: 


[link] Which of the following statements about the male reproductive 
system is false? 


a. The vas deferens carries sperm from the testes to the seminal 
vesicles. 


b. The ejaculatory duct joins the urethra. 

c. Both the prostate and the bulbourethral glands produce 
components of the semen. 

d. The prostate gland is located in the testes. 


Solution: 


[link] D 


Review Questions 


Exercise: 


Problem:Sperm are produced in the 


a. scrotum 

b. seminal vesicles 

c. seminiferous tubules 
d. prostate gland 


Solution: 


C 
Exercise: 
Problem: Which hormone causes FSH and LH to be released? 
a. testosterone 
b. estrogen 


c. GnRH 
d. progesterone 


Solution: 


Free Response 


Exercise: 


Problem: 


Discuss spermatogenesis with respect to the timing of the process, and 
the number and types of cells finally produced. 


Solution: 


Stem cells are laid down in the male during gestation and lie dormant 
until adolescence/puberty. At this time, spermatogenesis begins and 
continues until death, producing the maximum number of sperm (i.e. 
four per cell that started meiosis) with each meiotic division. The 
process takes approximately 70 days and the sperm are released into 
the lumen of the seminiferous tubules. 


Glossary 


bulbourethral gland 
the paired glands in the human male that produce a secretion that 
cleanses the urethra prior to ejaculation 


corpus luteum 
the endocrine tissue that develops from an ovarian follicle after 
ovulation; secretes progesterone and estrogen during pregnancy 


clitoris 
a sensory and erectile structure in female mammals, homologous to the 
male penis, stimulated during sexual arousal 


estrogen 
a reproductive hormone in females that assists in endometrial 
regrowth, ovulation, and calcium absorption 


follicle stimulating hormone (FSH) 
a reproductive hormone that causes sperm production in men and 
follicle development in women 


gestation 
the development before birth of a viviparous animal 


gestation period 
the length of time of development, from conception to birth, of the 
young of a viviparous animal 


gonadotropin-releasing hormone (GnRH) 
a hormone from the hypothalamus that causes the release of FSH and 
LH from the anterior pituitary 


human beta chorionic gonadotropin (§-HCG) 
a hormone produced by the chorion of the zygote that helps to 
maintain the corpus luteum and elevated levels of progesterone 


inhibin 
a hormone made by Sertoli cells, provides negative feedback to 
hypothalamus in control of FSH and GnRH release 


interstitial cell of Leydig 
a cell type found next to the seminiferous tubules that makes 
testosterone 


labia majora 
the large folds of tissue covering inguinal area 


labia minora 
the smaller folds of tissue within labia majora 


luteinizing hormone (LH) 
a reproductive hormone in both men and women, causes testosterone 
production in men and ovulation and lactation in women 


menstrual cycle 


the cycle of the degradation and re-growth of the endometrium 


oogenesis 
the process of producing haploid eggs 


ovarian cycle 
the cycle of preparation of egg for ovulation and the conversion of the 
follicle to the corpus luteum 


oviduct 
(also, fallopian tube) the muscular tube connecting uterus with ovary 
area 


ovulation 
the release of an oocyte from a mature follicle in the ovary of a 
vertebrate 


penis 
the male reproductive structure for urine elimination and copulation 


placenta 
the organ that supports the transport of nutrients and waste between the 
mothers and fetus’ blood in eutherian mammals 


progesterone 
a reproductive hormone in women; assists in endometrial regrowth and 
inhibition of FSH and LH release 


prostate gland 
a structure that is a mixture of smooth muscle and glandular material 
and that contributes to semen 


scrotum 
a sac containing testes, exterior to body 


semen 
a fluid mixture of sperm and supporting materials 


seminal vesicle 


a secretory accessory gland in male; contributes to semen 


seminiferous tubule 
the structures within which sperm production occurs in the testes 


Sertoli cell 
a cell in the walls of the seminiferous tubules that assists developing 
sperm and secretes inhibin 


spermatogenesis 
the process of producing haploid sperm 


testes 
a pair of male reproductive organs 


testosterone 
a reproductive hormone in men that assists in sperm production and 
promoting secondary sexual characteristics 


uterus 
a female reproductive structure in which an embryo develops 


vagina 
a muscular tube for the passage of menstrual flow, copulation, and 
birth of offspring 


Female Reproductive Anatomy and Physiology; Gestation and Labor 
By the end of this section, you will be able to: 


e Describe human female reproductive anatomy 

¢ Describe oogenesis and discuss its differences and similarities to 
spermatogenesis 

e Describe the roles of female reproductive hormones 

e Describe major events of gestation and labor 


Human Reproductive Anatomy 


Female Reproductive Anatomy 


A number of female reproductive structures are exterior to the body. These 
include the breasts and the vulva, which consists of the mons pubis, clitoris, 
and labia. ([link]; [link]). 


Ovaries 


Uterus 


Bladder 
Cervix aa 
Fimbrae 


Vagina 


Urethra 


Clitoris 


Labium minora 


Labium majora Vagina 


(a) (b) 


The reproductive structures of the human female are shown. 
(credit a: modification of work by Gray's Anatomy; credit b: 
modification of work by CDC) 


The breasts consist of mammary glands and fat. Each gland consists of 15 
to 25 lobes that have ducts that empty at the nipple and that supply the 
nursing child with nutrient- and antibody-rich milk to aid development and 
protect the child. 


Internal female reproductive structures include ovaries, oviducts, the uterus, 
and the vagina ([link]; [link]). The pair of ovaries is held in place in the 
abdominal cavity by a system of ligaments. The outermost layer of the 
ovary is made up of follicles that surround, nourish, and protect a single 
egg. During the menstrual period, a batch of follicles develops and prepares 
their eggs for release. At ovulation, one follicle ruptures and one egg is 
released. Following ovulation, the follicular tissue that surrounded the 
ovulated egg stays within the ovary and grows to form a solid mass called 
the corpus luteum. The corpus luteum secretes additional estrogen and the 
hormone progesterone that helps maintain the uterine lining during 
pregnancy. The ovaries also produce hormones, such as estrogen. 


The oviducts, or fallopian tubes, extend from the uterus in the lower 
abdominal cavity to the ovaries, but they are not in contact with the ovaries. 
The lateral ends of the oviducts flare out into a trumpet-like structure and 
have a fringe of finger-like projections called fimbrae. When an egg is 
released at ovulation, the fimbrae help the nonmotile egg enter into the 
tube. The walls of the oviducts have a ciliated epithelium over smooth 
muscle. The cilia beat, and the smooth muscle contracts, moving the egg 
toward the uterus. Fertilization usually takes place within the oviduct and 
the developing embryo is moved toward the uterus. It usually takes the egg 
or embryo a week to travel through the oviduct. 


Sterilization in women is called a tubal ligation; it is analogous to a 
vasectomy in males in that the oviducts are severed and sealed, preventing 
sperm from reaching the egg. 


The uterus is a structure about the size of a woman’s fist. The uterus has a 
thick muscular wall and is lined with an endometrium rich in blood vessels 
and mucus glands that develop and thicken during the female cycle. 
Thickening of the endometrium prepares the uterus to receive the fertilized 
egg or zygote, which will then implant itself in the endometrium. The 
uterus supports the developing embryo and fetus during gestation. 


Contractions of the smooth muscle in the uterus aid in forcing the baby 
through the vagina during labor. If fertilization does not occur, a portion of 
the lining of the uterus sloughs off during each menstrual period. The 
endometrium builds up again in preparation for implantation. Part of the 
uterus, called the cervix, protrudes into the top of the vagina. 


The vagina is a muscular tube that serves several purposes. It allows 


menstrual flow to leave the body. It is the receptacle for the penis during 
intercourse and the pathway for the delivery of offspring. 


Female Reproductive Anatomy 


Organ Location Function 

Clitoris External Sensory organ 

pons External Fatty area overlying pubic bone 

pubis 

Breast External Produces and delivers milk 

Ovaries Internal Produce and develop eggs 

Ovidueks ee Transport egg to uterus; site of 
fertilization 

Uterus Internal Supports developing embryo 

Vagina inital Common tube for intercourse, birth 


canal, passing menstrual flow 


Gametogenesis (Oogenesis) 


Gametogenesis, the production of sperm and eggs, involves the process of 
meiosis. During meiosis, two nuclear divisions separate the paired 
chromosomes in the nucleus and then separate the chromatids that were 
made during an earlier stage of the cell’s life cycle. Meiosis and its 
associated cell divisions produces haploid (n) cells with half of each pair of 
chromosomes normally found in diploid (2n) cells. The production of sperm 
is called spermatogenesis and the production of eggs is called oogenesis. 


Oogenesis 


Oogenesis occurs in the outermost layers of the ovaries. As with sperm 
production, oogenesis starts with a germ cell. In oogenesis, this germ cell is 
called an oogonium and forms during the embryological development of the 
individual. The oogonium undergoes mitosis to produce about one to two 
million oocytes by the time of birth. 


(2n) Oogonium 


|e 


. Primary oocyte 
Before birth (arrests in prophase 1) 


Pitot puberty | meta continues 


Secondary oocyte 
Polar body @) (an) (arrests in metaphase I!) 


[oni sperm entry 


~\jp—@ 


| mn fertilization 


Polar body da (2n) Fertilized Egg 


The process of oogenesis 
occurs in the ovary’s 


outermost layer. 


The primary oocytes begin meiosis before birth ([link]). However, the 
meiotic division is arrested in its progress in the first prophase stage. At the 
time of birth, all future eggs are in prophase I. This situation is in contrast 
with the male reproductive system in which sperm are produced 
continuously throughout the life of the individual. Starting at adolescence, 
anterior pituitary hormones cause the development of a few follicles in an 
ovary each month. This results in a primary oocyte finishing the first 
meiotic division. The cell divides unequally, with most of the cytoplasm 
and organelles going to one cell, called a secondary oocyte, and only one 
set of chromosomes and a small amount of cytoplasm going to the other 
cell. This second cell is called a polar body and usually dies. Cell division is 
again arrested, this time at metaphase II. At ovulation, this secondary 
oocyte is released and travels toward the uterus through the oviduct. If the 
secondary oocyte is fertilized, the cell continues through meiosis II, 
producing a second polar body and haploid egg, which fuses with the 
haploid sperm to form a fertilized egg (zygote) containing all 46 
chromosomes. 


Hormonal Control of Reproduction 


The human male and female reproductive cycles are controlled by the 
interaction of hormones from the hypothalamus and anterior pituitary with 
hormones from reproductive tissues and organs. In both sexes, the 
hypothalamus monitors and causes the release of hormones from the 
anterior pituitary gland. When the reproductive hormone is required, the 
hypothalamus sends a gonadotropin-releasing hormone (GnRH) to the 
anterior pituitary. This causes the release of follicle stimulating hormone 
(FSH) and luteinizing hormone (LH) from the anterior pituitary into the 
blood. Although these hormones are named after their functions in female 
reproduction, they are produced in both sexes and play important roles in 
controlling reproduction. Other hormones have specific functions in the 
male and female reproductive systems. 


Female Hormones 


The control of reproduction in females is more complex that in males. The 
female reproductive cycle is divided into the ovarian cycle and the 
menstrual cycle. The ovarian cycle governs the preparation of endocrine 
tissues and release of eggs, while the menstrual cycle governs the 
preparation and maintenance of the uterine lining ([link]). These cycles are 
coordinated over a 22—32 day cycle, with an average length of 28 days. 


As with the male, the GnRH from the hypothalamus causes the release of 
the hormones FSH and LH from the anterior pituitary. In addition, estrogen 
and relatively small amounts of progesterone are released from the 
developing follicles. As with testosterone in males, estrogen is responsible 
for the secondary sexual characteristics of females. These include breast 
development, flaring of the hips, and a shorter period for bone growth. 


The Ovarian Cycle and the Menstrual Cycle 


The ovarian and menstrual cycles are regulated by hormones of the 
hypothalamus, pituitary, and ovaries ([link]). The ebb and flow of the 
hormones causes the ovarian and menstrual cycles to advance. The ovarian 
and menstrual cycles occur concurrently. The first half of the ovarian cycle 
is the follicular phase. Slowly rising levels of FSH cause the growth of 
follicles on the surface of the ovary. This process prepares the egg for 
ovulation. As the follicles grow, they begin releasing estrogen. The first few 
days of this cycle coincide with menstruation or the sloughing off of the 
functional layer of the endometrium in the uterus. After about five days, 
estrogen levels rise and the menstrual cycle enters the proliferative phase. 
The endometrium begins to regrow, replacing the blood vessels and glands 
that deteriorated during the end of the last cycle. 


Note: 
Art Connection 


| Follicular phase Il Ovulation 

Pituitary hormone Pituitary hormone 

effect: LH and FSH effect: LH and FSH 

stimulate several stimulate maturation GnRH 
follicles to grow. of one of the 


growing follicles. 


Estrogen 


Ovarian Ovarian 
hormone hormone 
effects: effects: 


Follicles produce 
low levels of 
estrogen that 

e Inhibit GnRH 


secretion by 
| Fotices | the hypothalamus, 
keeping LH and 


: FSH 
LH 
FSH levels low. 


Estrogen e Cause endometrial Estrogen levels rise, 
arteries to constrict resulting in 
due to low levels, ovulation about 
resulting in a day later. 

Endometum menstruation. JEndometum e Cause the 
endometrium 


to thicken. 


Dominant follicle 
produces high 
levels of estrogen, 
which: 

e Stimulate GnRH 
secretion by the 
hypothalamus. 
LH and FSH 


LH 


Estrogen 


Ill Luteal phase 


Pituitary hormone 
effect: LH stimulates 
formation of a corpus GnRH 
luteum from follicular 
tissue left behind after 
ovulation. 


Ovarian 
hormone 
effects: 
Estrogen The corpus 
luteum secretes 
Progesterone estrogen and 


; 


progesterone that 
Corpus luteum e Block GnRH 
production by the 
hypothalamus 


Estrogen and LH and 
! FSH production 
Progesterone by the pituitary. 
ale Cause the 
endometrium endometrium to 
further develop. 


The ovarian and menstrual cycles of female reproduction are 
regulated by hormones produced by the hypothalamus, pituitary, and 
ovaries. 


Just prior to the middle of the cycle (approximately day 14), the high level 
of estrogen causes FSH and especially LH to rise rapidly then fall. The 
spike in LH causes the most mature follicle to rupture and release its egg. 
This is ovulation. The follicles that did not rupture degenerate and their 
eggs are lost. The level of estrogen decreases when the extra follicles 
degenerate. 


Following ovulation, the ovarian cycle enters its luteal phase and the 
menstrual cycle enters its secretory phase, both of which run from about 
day 15 to 28. The luteal and secretory phases refer to changes in the 
ruptured follicle. The cells in the follicle undergo physical changes and 
produce a structure called a corpus luteum. The corpus luteum produces 
estrogen and larger amounts of progesterone. The progesterone facilitates 
the regrowth of the uterine lining and inhibits the release of further FSH and 
LH. The uterus is being prepared to accept a fertilized egg, should it occur 
during this cycle. The inhibition of FSH and LH prevents any further eggs 
and follicles from developing, while the progesterone is elevated. The level 
of estrogen produced by the corpus luteum increases to a steady level for 
the next few days. 


If no fertilized egg is implanted into the uterus, the corpus luteum 
degenerates and the levels of estrogen and progesterone decrease. The 
endometrium begins to degenerate as the progesterone levels drop, 
initiating the next menstrual cycle. The decrease in progesterone also allows 
the hypothalamus to send GnRH to the anterior pituitary, releasing FSH and 
LH and starting the cycles again. 


Note: 

Career in Action 

Reproductive Endocrinologist 

A reproductive endocrinologist is a physician who treats a variety of 
hormonal disorders related to reproduction and infertility in both men and 
women. The disorders include menstrual problems, infertility, pregnancy 
loss, sexual dysfunction, and menopause. Doctors may use fertility drugs, 
surgery, or assisted reproductive techniques (ART) in their therapy. ART 


involves the use of procedures to manipulate the egg or sperm to facilitate 
reproduction, such as in vitro fertilization. 

Reproductive endocrinologists undergo extensive medical training, first in 
a four-year residency in obstetrics and gynecology, then in a three-year 
fellowship in reproductive endocrinology. To be board certified in this 
area, the physician must pass written and oral exams in both areas. 


Gestation 


Pregnancy begins with the fertilization of an egg and continues through to 
the birth of the individual. The length of time of gestation, or the gestation 
period, in humans is approximately 266 days. 


Within 24 hours of fertilization, the egg nucleus has finished meiosis and 
the egg and sperm nuclei fuse. With fusion, the cell is known as a zygote. 
The zygote initiates cleavage and the developing embryo travels through 
the oviduct to the uterus. The developing embryo must implant into the wall 
of the uterus within seven days, or it will deteriorate and die. The outer 
layers of the developing embryo or blastocyst grow into the endometrium 
by digesting the endometrial cells, and healing of the endometrium closes 
up the blastocyst into the tissue. Another layer of the blastocyst, the 
chorion, begins releasing a hormone called human beta chorionic 
gonadotropin (B-HCG), which makes its way to the corpus luteum and 
keeps that structure active. This ensures adequate levels of progesterone 
that will maintain the endometrium of the uterus for the support of the 
developing embryo. Pregnancy tests determine the level of B-HCG in urine 
or serum. If the hormone is present, the test is positive. 


The gestation period is divided into three equal periods or trimesters. 
During the first two-to-four weeks of the first trimester, nutrition and waste 
are handled by the endometrial lining through diffusion. As the trimester 
progresses, the outer layer of the embryo begins to merge with the 
endometrium, and the placenta forms. The placenta takes over the nutrient 
and waste requirements of the embryo and fetus, with the mother’s blood 
passing nutrients to the placenta and removing waste from it. Chemicals 
from the fetus, such as bilirubin, are processed by the mother’s liver for 


elimination. Some of the mother’s immunoglobulins will pass through the 
placenta, providing passive immunity against some potential infections. 


Internal organs and body structures begin to develop during the first 
trimester. By five weeks, limb buds, eyes, the heart, and liver have been 
basically formed. By eight weeks, the term fetus applies, and the body is 
essentially formed ({link]a). The individual is about five centimeters (two 
inches) in length and many of the organs, such as the lungs and liver, are 
not yet functioning. Exposure to any toxins is especially dangerous during 
the first trimester, as all of the body’s organs and structures are going 
through initial development. Anything that interferes with chemical 
signaling during that development can have a severe effect on the fetus’ 
survival. 


Umbilical cord 


(b) (c) 


(a) Fetal development is shown at nine weeks 
gestation. (b) This fetus is just entering the second 
trimester, when the placenta takes over more of the 

functions performed as the baby develops. (c) 

There is rapid fetal growth during the third 
trimester. (credit a: modification of work by Ed 
Uthman; credit b: modification of work by 
National Museum of Health and Medicine; credit 
c: modification of work by Gray’s Anatomy) 


During the second trimester, the fetus grows to about 30 cm (about 12 
inches) ([link]|b). It becomes active and the mother usually feels the first 
movements. All organs and structures continue to develop. The placenta has 
taken over the functions of nutrition and waste elimination and the 
production of estrogen and progesterone from the corpus luteum, which has 
degenerated. The placenta will continue functioning up through the delivery 
of the baby. During the third trimester, the fetus grows to 3 to 4 kg (6.5-8.5 
Ibs.) and about 50 cm (19-20 inches) long ([link]c). This is the period of the 
most rapid growth during the pregnancy as all organ systems continue to 
grow and develop. 


Labor is the muscular contractions to expel the fetus and placenta from the 
uterus. Toward the end of the third trimester, estrogen causes receptors on 
the uterine wall to develop and bind the hormone oxytocin. At this time, the 
baby reorients, facing forward and down with the back or crown of the head 
engaging the cervix (uterine opening). This causes the cervix to stretch and 
nerve impulses are sent to the hypothalamus, which signals the release of 
oxytocin from the posterior pituitary. Oxytocin causes smooth muscle in the 
uterine wall to contract. At the same time, the placenta releases 
prostaglandins into the uterus, increasing the contractions. A positive 
feedback relay occurs between the uterus, hypothalamus, and the posterior 
pituitary to assure an adequate supply of oxytocin. As more smooth muscle 
cells are recruited, the contractions increase in intensity and force. 


There are three stages to labor. During stage one, the cervix thins and 
dilates. This is necessary for the baby and placenta to be expelled during 
birth. The cervix will eventually dilate to about 10 cm. During stage two, 
the baby is expelled from the uterus. The uterus contracts and the mother 
pushes as she compresses her abdominal muscles to aid the delivery. The 
last stage is the passage of the placenta after the baby has been born and the 
organ has completely disengaged from the uterine wall. If labor should stop 
before stage two is reached, synthetic oxytocin, known as Pitocin, can be 
administered to restart and maintain labor. 


Section Summary 


The female reproductive cycle is controlled by hormones released from the 
hypothalamus and anterior pituitary and hormones from reproductive 
tissues and organs. The hypothalamus monitors the need for FSH and LH 
production and release from the anterior pituitary. FSH and LH affect 
reproductive structures to cause the preparation of eggs for release and 
possible fertilization. In females, FSH and LH cause estrogen and 
progesterone to be produced. They regulate the female reproductive cycle, 
which is divided into the ovarian cycle and the menstrual cycle. 


Human pregnancy begins with fertilization of an egg and proceeds through 
the three trimesters of gestation. The first trimester lays down the basic 
structures of the body, including the limb buds, heart, eyes, and the liver. 
The second trimester continues the development of all of the organs and 
systems. The third trimester exhibits the greatest growth of the fetus and 
culminates in labor and delivery. The labor process has three stages 
(contractions, delivery of the fetus, and expulsion of the placenta), each 
propelled by hormones. 


Art Connections 


Exercise: 


Problem: 


[link] Which of the following statements about hormone regulation of 
the female reproductive cycle is false? 


a. LH and FSH are produced in the pituitary, and estrogen and 
progesterone are produced in the ovaries. 

b. Estrogen and progesterone secreted from the corpus luteum (CL) 
cause the endometrium to thicken. 

c. Follicles produce high levels of progesterone. 

d. Secretion of GnRH by the hypothalamus is inhibited by high 
levels of estrogen. 


Solution: 


[link] C 


Review Questions 


Exercise: 


Problem: 


Which female organ has an endometrial lining that will support a 
developing baby? 


a. labia minora 
b. breast 

c. Ovaries 

d. uterus 


Solution: 


D 


Exercise: 


Problem: Which hormone causes FSH and LH to be released? 


a. testosterone 
b. estrogen 

c. GnRH 

d. progesterone 


Solution: 


@ 


Exercise: 


Problem: 


Nutrient and waste requirements for the developing fetus are handled 
during the first few weeks by 


a. the placenta 

b. diffusion through the endometrium 
c. the chorion 

d. the blastocyst 


Solution: 


B 
Exercise: 


Problem: 


Which hormone is primarily responsible for the contractions during 
labor? 


a. oxytocin 

b. estrogen 

c. B-HCG 

d. progesterone 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


Describe oogenesis with respect to the timing of the processes and the 
number and type of cells finally produced. 


Solution: 


Stem cells in the female increase to one to two million and enter the 
first meiotic division and are arrested in prophase. Oogenesis 
continues again at adolescence in batches of eggs with each menstrual 
cycle. These primary oocytes finish the first meiotic division, 
producing a viable egg with most of the cytoplasm and its contents, 
and a second cell called a polar body containing 23 chromosomes. The 
second meiotic division is initiated and arrested in metaphase. At 
ovulation, one egg is released. If this egg is fertilized, it finishes the 
second meiotic division. This is a diploid, fertilized egg. 


Exercise: 


Problem: 
Describe the events in the ovarian cycle leading up to ovulation. 
Solution: 


Low levels of progesterone allow the hypothalamus to send GnRH to 
the anterior pituitary and cause the release of FSH and LH. FSH 
stimulates follicles on the ovary to grow and prepare the eggs for 
ovulation. As the follicles increase in size, they begin to release 
estrogen and a low level of progesterone into the blood. The level of 
estrogen rises to a peak, causing a spike in the concentration of LH. 
This causes the most mature follicle to rupture and ovulation occurs. 


Exercise: 


Problem: Describe the stages of labor. 


Solution: 


Stage one of labor results in uterine contractions, which thin the cervix 
and dilate the cervical opening. Stage two delivers the baby, and stage 
three delivers the placenta. 


Glossary 


bulbourethral gland 
the paired glands in the human male that produce a secretion that 
cleanses the urethra prior to ejaculation 


corpus luteum 
the endocrine tissue that develops from an ovarian follicle after 
ovulation; secretes progesterone and estrogen during pregnancy 


clitoris 
a sensory and erectile structure in female mammals, homologous to the 
male penis, stimulated during sexual arousal 


estrogen 
a reproductive hormone in females that assists in endometrial 
regrowth, ovulation, and calcium absorption 


follicle stimulating hormone (FSH) 
a reproductive hormone that causes sperm production in men and 
follicle development in women 


gestation 
the development before birth of a viviparous animal 


gestation period 
the length of time of development, from conception to birth, of the 
young of a viviparous animal 


gonadotropin-releasing hormone (GnRH) 
a hormone from the hypothalamus that causes the release of FSH and 
LH from the anterior pituitary 


human beta chorionic gonadotropin (§-HCG) 
a hormone produced by the chorion of the zygote that helps to 
maintain the corpus luteum and elevated levels of progesterone 


inhibin 
a hormone made by Sertoli cells, provides negative feedback to 
hypothalamus in control of FSH and GnRH release 


interstitial/Leydig cell 
a cell type found next to the seminiferous tubules that makes 
testosterone 


luteinizing hormone (LH) 
a reproductive hormone in both men and women, causes testosterone 
production in men and ovulation and lactation in women 


menstrual cycle 
the cycle of the degradation and re-growth of the endometrium 


oogenesis 
the process of producing haploid eggs 


ovarian cycle 
the cycle of preparation of egg for ovulation and the conversion of the 
follicle to the corpus luteum 


oviduct 
(also, fallopian tube) the muscular tube connecting uterus with ovary 
area 


ovulation 
the release of an oocyte from a mature follicle in the ovary of a 
vertebrate 


penis 
the male reproductive structure for urine elimination and copulation 


placenta 


the organ that supports the transport of nutrients and waste between the 
mothers and fetus’ blood in eutherian mammals 


progesterone 
a reproductive hormone in women; assists in endometrial regrowth and 
inhibition of FSH and LH release 


prostate gland 
a structure that is a mixture of smooth muscle and glandular material 
and that contributes to semen 


scrotum 
a sac containing testes, exterior to body 


semen 
a fluid mixture of sperm and supporting materials 


seminal vesicle 
a secretory accessory gland in male; contributes to semen 


seminiferous tubule 
the structures within which sperm production occurs in the testes 


Sertoli cell 
a cell in the walls of the seminiferous tubules that assists developing 
sperm and secretes inhibin 


spermatogenesis 
the process of producing haploid sperm 


testes 
a pair of male reproductive organs 


testosterone 
a reproductive hormone in men that assists in sperm production and 
promoting secondary sexual characteristics 


uterus 
a female reproductive structure in which an embryo develops 


vagina 
a muscular tube for the passage of menstrual flow, copulation, and 
birth of offspring 


Introduction to Bone Tissue 
class="introduction" 
Child Looking at Bones 


Bone is a 
living tissue. 
Unlike the 
bones of a 
fossil made 
inert by a 
process of 
mineralization 
, achild’s 
bones will 
continue to 
grow and 
develop while 
contributing to 
the support 
and function 
of other body 
systems. 
(credit: James 
Emery) 


FOSSIL CROCODILE 


Azraripesuchus pa 


Note: 
Chapter Objectives 
After studying this chapter, you will be able to: 


List and describe the functions of bones 

Describe the classes of bones 

e Discuss the process of bone formation and development 

e Explain how bone repairs itself after a fracture 

e Discuss the effect of exercise, nutrition, and hormones on bone tissue 


Bones make good fossils. While the soft tissue of a once living organism 
will decay and fall away over time, bone tissue will, under the right 


conditions, undergo a process of mineralization, effectively turning the 
bone to stone. A well-preserved fossil skeleton can give us a good sense of 
the size and shape of an organism, just as your skeleton helps to define your 
size and shape. Unlike a fossil skeleton, however, your skeleton is a 
structure of living tissue that grows, repairs, and renews itself. The bones 
within it are dynamic and complex organs that serve a number of important 
functions, including some necessary to maintain homeostasis. 


Functions of the Skeletal System 
By the end of this section, you will be able to: 


¢ Define bone, cartilage, and the skeletal system 
e List and describe the functions of the skeletal system 


Bone, or osseous tissue, is a hard, dense connective tissue that forms most 
of the adult skeleton, the support structure of the body. In the areas of the 
skeleton where bones move (for example, the ribcage and joints), cartilage, 
a semi-rigid form of connective tissue, provides flexibility and smooth 
surfaces for movement. The skeletal system is the body system composed 
of bones and cartilage and performs the following critical functions for the 
human body: 


e supports the body 

e facilitates movement 

¢ protects internal organs 

e produces blood cells 

e stores and releases minerals and fat 


Support, Movement, and Protection 


The most apparent functions of the skeletal system are the gross functions 
—those visible by observation. Simply by looking at a person, you can see 
how the bones support, facilitate movement, and protect the human body. 


Just as the steel beams of a building provide a scaffold to support its weight, 
the bones and cartilage of your skeletal system compose the scaffold that 
supports the rest of your body. Without the skeletal system, you would be a 
limp mass of organs, muscle, and skin. 


Bones also facilitate movement by serving as points of attachment for your 
muscles. While some bones only serve as a support for the muscles, others 
also transmit the forces produced when your muscles contract. From a 
mechanical point of view, bones act as levers and joints serve as fulcrums 
({link]). Unless a muscle spans a joint and contracts, a bone is not going to 


move. For information on the interaction of the skeletal and muscular 
systems, that is, the musculoskeletal system, seek additional content. 
Bones Support Movement 


Bones act as levers when 
muscles span a joint and 
contract. (credit: Benjamin J. 
DeLong) 


Bones also protect internal organs from injury by covering or surrounding 
them. For example, your ribs protect your lungs and heart, the bones of 
your vertebral column (spine) protect your spinal cord, and the bones of 
your cranium (skull) protect your brain ({link]). 

Bones Protect Brain 


The cranium completely 
surrounds and protects 
the brain from non- 
traumatic injury. 


Note: 

Career Connection 

Orthopedist 

An orthopedist is a doctor who specializes in diagnosing and treating 
disorders and injuries related to the musculoskeletal system. Some 
orthopedic problems can be treated with medications, exercises, braces, 
and other devices, but others may be best treated with surgery ([link]). 
Arm Brace 


An orthopedist will sometimes prescribe 
the use of a brace that reinforces the 
underlying bone structure it is being used 
to support. (credit: Juhan Sonin) 


While the origin of the word “orthopedics” (ortho- = “straight”; paed- = 
“child”), literally means “straightening of the child,” orthopedists can have 
patients who range from pediatric to geriatric. In recent years, orthopedists 
have even performed prenatal surgery to correct spina bifida, a congenital 
defect in which the neural canal in the spine of the fetus fails to close 
completely during embryologic development. 

Orthopedists commonly treat bone and joint injuries but they also treat 
other bone conditions including curvature of the spine. Lateral curvatures 
(scoliosis) can be severe enough to slip under the shoulder blade (scapula) 
forcing it up as a hump. Spinal curvatures can also be excessive 
dorsoventrally (kyphosis) causing a hunch back and thoracic compression. 
These curvatures often appear in preteens as the result of poor posture, 
abnormal growth, or indeterminate causes. Mostly, they are readily treated 
by orthopedists. As people age, accumulated spinal column injuries and 
diseases like osteoporosis can also lead to curvatures of the spine, hence 
the stooping you sometimes see in the elderly. 


Some orthopedists sub-specialize in sports medicine, which addresses both 
simple injuries, such as a sprained ankle, and complex injuries, such as a 
torn rotator cuff in the shoulder. Treatment can range from exercise to 
surgery. 


Mineral Storage, Energy Storage, and Hematopoiesis 


On a metabolic level, bone tissue performs several critical functions. For 
one, the bone matrix acts as a reservoir for a number of minerals important 
to the functioning of the body, especially calcium, and potassium. These 
minerals, incorporated into bone tissue, can be released back into the 
bloodstream to maintain levels needed to support physiological processes. 
Calcium ions, for example, are essential for muscle contractions and 
controlling the flow of other ions involved in the transmission of nerve 
impulses. 


Bone also serves as a site for fat storage and blood cell production. The 
softer connective tissue that fills the interior of most bone is referred to as 
bone marrow ((link]). There are two types of bone marrow: yellow marrow 
and red marrow. Yellow marrow contains adipose tissue; the triglycerides 
stored in the adipocytes of the tissue can serve as a source of energy. Red 
marrow is where hematopoiesis—the production of blood cells—takes 
place. Red blood cells, white blood cells, and platelets are all produced in 
the red marrow. 

Head of Femur Showing Red and Yellow Marrow 


Outer surface of bone 


Red marrow 


Yellow marrow 


The head of the femur contains both 
yellow and red marrow. Yellow marrow 
stores fat. Red marrow is responsible for 

hematopoiesis. (credit: modification of 
work by “stevenfruitsmaak”/Wikimedia 
Commons) 


Chapter Review 


The major functions of the bones are body support, facilitation of 
movement, protection of internal organs, storage of minerals and fat, and 
hematopoiesis. Together, the muscular system and skeletal system are 
known as the musculoskeletal system. 


Review Questions 


Exercise: 


Problem: 


Which function of the skeletal system would be especially important if 
you were in a car accident? 


a. storage of minerals 

b. protection of internal organs 
c. facilitation of movement 

d. fat storage 


Solution: 


B 


Exercise: 


Problem:Bone tissue can be described as 


a. dead calcified tissue 

b. cartilage 

c. the skeletal system 

d. dense, hard connective tissue 


Solution: 


D 


Exercise: 


Problem: Without red marrow, bones would not be able to 


a. store phosphate 
b. store calcium 

c. make blood cells 
d. move like levers 


Solution: 
C 
Exercise: 
Problem: Yellow marrow has been identified as 
a. an area of fat storage 
b. a point of attachment for muscles 


c. the hard portion of bone 
d. the cause of kyphosis 


Solution: 


A 
Exercise: 
Problem: Which of the following can be found in areas of movement? 


a. hematopoiesis 
b. cartilage 

c. yellow marrow 
d. red marrow 


Solution: 
B 
Exercise: 


Problem:The skeletal system is made of 


a. muscles and tendons 
b. bones and cartilage 
c. vitreous humor 

d. minerals and fat 


Solution: 


B 


Critical Thinking Questions 


Exercise: 


Problem: 


The skeletal system is composed of bone and cartilage and has many 
functions. Choose three of these functions and discuss what features of 
the skeletal system allow it to accomplish these functions. 


Solution: 


It supports the body. The rigid, yet flexible skeleton acts as a 
framework to support the other organs of the body. 


It facilitates movement. The movable joints allow the skeleton to 
change shape and positions; that is, move. 


It protects internal organs. Parts of the skeleton enclose or partly 
enclose various organs of the body including our brain, ears, heart, and 
lungs. Any trauma to these organs has to be mediated through the 
skeletal system. 


It produces blood cells. The central cavity of long bones is filled with 
marrow. The red marrow is responsible for forming red and white 
blood cells. 


It stores and releases minerals and fat. The mineral component of 
bone, in addition to providing hardness to bone, provides a mineral 
reservoir that can be tapped as needed. Additionally, the yellow 
marrow, which is found in the central cavity of long bones along with 
red marrow, serves as a Storage site for fat. 


Glossary 


bone 
hard, dense connective tissue that forms the structural elements of the 
skeleton 


cartilage 


semi-rigid connective tissue found on the skeleton in areas where 
flexibility and smooth surfaces support movement 


hematopoiesis 
production of blood cells, which occurs in the red marrow of the bones 


orthopedist 
doctor who specializes in diagnosing and treating musculoskeletal 
disorders and injuries 


osseous tissue 
bone tissue; a hard, dense connective tissue that forms the structural 
elements of the skeleton 


red marrow 
connective tissue in the interior cavity of a bone where hematopoiesis 
takes place 


skeletal system 
organ system composed of bones and cartilage that provides for 
movement, support, and protection 


yellow marrow 
connective tissue in the interior cavity of a bone where fat is stored 


Bone Structure 
By the end of this section, you will be able to: 


e Identify the anatomical features of a bone 

¢ Describe the histology of bone tissue 

e¢ Compare and contrast compact and spongy bone 

e Identify the structures that compose compact and spongy bone 
e Describe how bones are nourished and innervated 


Bone tissue (osseous tissue) differs greatly from other tissues in the body. 
Bone is hard and many of its functions depend on that characteristic 
hardness. Later discussions in this chapter will show that bone is also 
dynamic in that its shape adjusts to accommodate stresses. This section will 
examine the gross anatomy of bone first and then move on to its histology. 


Gross Anatomy of Bone 


The structure of a long bone allows for the best visualization of all of the 
parts of a bone ([link]). A long bone has two parts: the diaphysis and the 
epiphysis. The diaphysis is the tubular shaft that runs between the proximal 
and distal ends of the bone. The hollow region in the diaphysis is called the 
medullary cavity, which is filled with yellow marrow. The walls of the 
diaphysis are composed of dense and hard compact bone. 

Anatomy of a Long Bone 


Articular cartilage 


Proximal 
epiphysis 


Metaphysis Spongy bone 
Epiphyseal line 
Red bone marrow 


Endosteum 


Compact bone 


Medullary cavity 
Diaphysis Yellow bone marrow 


Periosteum 


Nutrient artery 


Distal 
epiphysis 


Articular cartilage 


A typical long bone shows the 
gross anatomical characteristics of 
bone. 


The wider section at each end of the bone is called the epiphysis (plural = 
epiphyses), which is filled with spongy bone. Red marrow fills the spaces in 
the spongy bone. Each epiphysis meets the diaphysis at the metaphysis, the 
narrow area that contains the epiphyseal plate (growth plate), a layer of 
hyaline (transparent) cartilage in a growing bone. When the bone stops 
growing in early adulthood (approximately 18-21 years), the cartilage is 


replaced by osseous tissue and the epiphyseal plate becomes an epiphyseal 
line. 


Bone Cells and Tissue 


Bone contains a relatively small number of cells entrenched in a matrix of 
collagen fibers that provide a surface for inorganic salt crystals to adhere. 
These salt crystals form when calcium phosphate and calcium carbonate 
combine to create hydroxyapatite, which incorporates other inorganic salts 
like magnesium hydroxide, fluoride, and sulfate as it crystallizes, or 
calcifies, on the collagen fibers. The hydroxyapatite crystals give bones 
their hardness and strength, while the collagen fibers give them flexibility 
so that they are not brittle. 


Although bone cells compose a small amount of the bone volume, they are 
crucial to the function of bones. Four types of cells are found within bone 
tissue: osteoblasts, osteocytes, osteogenic cells, and osteoclasts ([link]). 
Bone Cells 


Osteocyte Osteoblast Osteogenic cell Osteoclast 
(maintains (forms bone matrix) (stem cell) (resorbs bone) 
bone tissue) 


Four types of cells are found within bone 
tissue. Osteogenic cells are undifferentiated 
and develop into osteoblasts. When 
osteoblasts get trapped within the calcified 
matrix, their structure and function changes, 
and they become osteocytes. Osteoclasts 


develop from monocytes and macrophages 
and differ in appearance from other bone 
cells. 


The osteoblast is the bone cell responsible for forming new bone and is 
found in the growing portions of bone, including the periosteum and 
endosteum. Osteoblasts, which do not divide, synthesize and secrete the 
collagen matrix and calcium salts. As the secreted matrix surrounding the 
osteoblast calcifies, the osteoblast become trapped within it; as a result, it 
changes in structure and becomes an osteocyte, the primary cell of mature 
bone and the most common type of bone cell. Each osteocyte is located in a 
space called a lacuna and is surrounded by bone tissue. Osteocytes 
maintain the mineral concentration of the matrix via the secretion of 
enzymes. Like osteoblasts, osteocytes lack mitotic activity. They can 
communicate with each other and receive nutrients via long cytoplasmic 
processes that extend through canaliculi (singular = canaliculus), channels 
within the bone matrix. 


If osteoblasts and osteocytes are incapable of mitosis, then how are they 
replenished when old ones die? The answer lies in the properties of a third 
category of bone cells—the osteogenic cell. These osteogenic cells are 
undifferentiated with high mitotic activity and they are the only bone cells 
that divide. Immature osteogenic cells are found in the deep layers of the 
periosteum and the marrow. They differentiate and develop into osteoblasts. 


The dynamic nature of bone means that new tissue is constantly formed, 
and old, injured, or unnecessary bone is dissolved for repair or for calcium 
release. The cell responsible for bone resorption, or breakdown, is the 
osteoclast. They are found on bone surfaces, are multinucleated, and 
originate from monocytes and macrophages, two types of white blood cells, 
not from osteogenic cells. Osteoclasts are continually breaking down old 
bone while osteoblasts are continually forming new bone. The ongoing 
balance between osteoblasts and osteoclasts is responsible for the constant 
but subtle reshaping of bone. [link] reviews the bone cells, their functions, 
and locations. 


Bone Cells 


Cell type Function 
Osteogenic Develop into 
cells osteoblasts 
Osteoblasts Bone formation 
Maintain mineral 
Osteocytes concentration of 
matrix 
Osteoclasts Bone resorption 
Compact and Spongy Bone 


Location 


Deep layers of the 
periosteum and the marrow 


Growing portions of bone, 
including periosteum and 
endosteum 


Entrapped in matrix 


Bone surfaces and at sites of 
old, injured, or unneeded 
bone 


The differences between compact and spongy bone are best explored via 
their histology. Most bones contain compact and spongy osseous tissue, but 
their distribution and concentration vary based on the bone’s overall 
function. Compact bone is dense so that it can withstand compressive 
forces, while spongy (cancellous) bone has open spaces and supports shifts 
in weight distribution. 


Compact Bone 


Compact bone is the denser, stronger of the two types of bone tissue ([Link]) 


and it provides support and protection. 


Diagram of Compact Bone 


(a) This cross-sectional view of compact bone shows the basic 
structural unit, the osteon. (b) In this micrograph of the osteon, you can 
clearly see the concentric lamellae and central canals. LM x 40. 
(Micrograph provided by the Regents of University of Michigan 
Medical School © 2012) 


Compact bone Spongy bone 


Medullary cavity 


Periosteum 


Concentric lamellae 


Osteon 


Lymphatic vessel 
Circumferential 


lamellae Nerve 


Periosteal artery Blood vessels 
Periosteal vein rabeéulae 


Periosteum: 
Outer fibrous layer 
Inner osteogenic layer 


Interstitial lamellae Medullar cavity 


Perforating canal 
Spongy bone 


Central canal 
Blood vessels 
Lymphatic vessel 


Nerve 
Compact bone 


The microscopic structural unit of compact bone is called an osteon, or 
Haversian system. Each osteon is composed of concentric rings of calcified 
matrix called lamellae (singular = lamella). Running down the center of 
each osteon is the central canal, or Haversian canal, which contains blood 
vessels, nerves, and lymphatic vessels. 


The osteocytes are located inside spaces called lacunae (singular = lacuna), 
found at the borders of adjacent lamellae. As described earlier, canaliculi 
connect with the canaliculi of other lacunae and eventually with the central 
canal. This system allows nutrients to be transported to the osteocytes and 
wastes to be removed from them. 


Spongy (Cancellous) Bone 


Like compact bone, spongy bone, also known as cancellous bone, contains 
osteocytes housed in lacunae, but they are not arranged in concentric 
circles. Instead, the lacunae and osteocytes are found in a lattice-like 
network of matrix spikes called trabeculae (singular = trabecula) ([link]). 
The trabeculae may appear to be a random network, but each trabecula 
forms along lines of stress to provide strength to the bone. The spaces of the 
trabeculated network provide balance to the dense and heavy compact bone 
by making bones lighter so that muscles can move them more easily. In 
addition, the spaces in some spongy bones contain red marrow, protected by 
the trabeculae, where hematopoiesis occurs. 

Diagram of Spongy Bone 


Spongy bone 


Lacuna 


Osteocyte 


Osteoclast 


Osteoblasts aligned 
along trabeculae of 
new bone 
Canaliculi Endosteum _Lamellae . 
openings SS Srk Canaliculi 
on surface sa.) 

Lamellae 


Spongy bone is composed of trabeculae that contain 
the osteocytes. Red marrow fills the spaces in some 


bones. 


Note: 

Aging and the... 

Skeletal System: Paget’s Disease 

Paget’s disease usually occurs in adults over age 40. It is a disorder of the 
bone remodeling process that begins with overactive osteoclasts. This 
means more bone is resorbed than is laid down. The osteoblasts try to 
compensate but the new bone they lay down is weak and brittle and 
therefore prone to fracture. 

While some people with Paget’s disease have no symptoms, others 
experience pain, bone fractures, and bone deformities ([link]). Bones of the 
pelvis, skull, spine, and legs are the most commonly affected. When 
occurring in the skull, Paget’s disease can cause headaches and hearing 
loss. 


Paget's Disease 


Normal Paget’s disease 


Normal leg bones are relatively 
straight, but those affected by 


Paget’s disease are porous and 
curved. 


What causes the osteoclasts to become overactive? The answer is still 
unknown, but hereditary factors seem to play a role. Some scientists 
believe Paget’s disease is due to an as-yet-unidentified virus. 

Paget’s disease is diagnosed via imaging studies and lab tests. X-rays may 
show bone deformities or areas of bone resorption. Bone scans are also 
useful. In these studies, a dye containing a radioactive ion is injected into 
the body. Areas of bone resorption have an affinity for the ion, so they will 
light up on the scan if the ions are absorbed. In addition, blood levels of an 
enzyme called alkaline phosphatase are typically elevated in people with 
Paget’s disease. 

Bisphosphonates, drugs that decrease the activity of osteoclasts, are often 
used in the treatment of Paget’s disease. However, in a small percentage of 
cases, bisphosphonates themselves have been linked to an increased risk of 
fractures because the old bone that is left after bisphosphonates are 
administered becomes worn out and brittle. Still, most doctors feel that the 
benefits of bisphosphonates more than outweigh the risk; the medical 
professional has to weigh the benefits and risks on a case-by-case basis. 
Bisphosphonate treatment can reduce the overall risk of deformities or 
fractures, which in turn reduces the risk of surgical repair and its associated 
risks and complications. 


Blood and Nerve Supply 


The spongy bone and medullary cavity receive nourishment from arteries 
that pass through the compact bone. The arteries enter through the nutrient 
foramen (plural = foramina), small openings in the diaphysis ({link]). The 
osteocytes in spongy bone are nourished by blood vessels of the periosteum 
that penetrate spongy bone and blood that circulates in the marrow cavities. 
As the blood passes through the marrow cavities, it is collected by veins, 
which then pass out of the bone through the foramina. 


In addition to the blood vessels, nerves follow the same paths into the bone 
where they tend to concentrate in the more metabolically active regions of 


the bone. The nerves sense pain, and it appears the nerves also play roles in 
regulating blood supplies and in bone growth, hence their concentrations in 
metabolically active sites of the bone. 

Diagram of Blood and Nerve Supply to Bone 


Articular 
Epiphyseal cartilage 
artery 
and vein Metaphyseal 
artery 


and vein 


Periosteum 


Compact 
bone 


Nutrient 
artery 
and vein 


Nutrient 


foramen Medullary cavity 


Metaphyseal 
artery and vein 


Metaphysis —|| “4 


Epiphyseal 
line 


Blood vessels and nerves 
enter the bone through the 
nutrient foramen. 


Chapter Review 


A hollow medullary cavity filled with yellow marrow runs the length of the 
diaphysis of a long bone. The walls of the diaphysis are compact bone. The 
epiphyses, which are wider sections at each end of a long bone, are filled 
with spongy bone and red marrow. The epiphyseal plate, a layer of hyaline 
cartilage, is replaced by osseous tissue as the organ grows in length. 


Bone matrix consists of collagen fibers and organic ground substance, 
primarily hydroxyapatite formed from calcium salts. Osteogenic cells 
develop into osteoblasts. Osteoblasts are cells that make new bone. They 
become osteocytes, the cells of mature bone, when they get trapped in the 
matrix. Osteoclasts engage in bone resorption. Compact bone is dense and 
composed of osteons, while spongy bone is less dense and made up of 
trabeculae. Blood vessels and nerves enter the bone through the nutrient 
foramina to nourish and innervate bones. 


Review Questions 


Exercise: 


Problem: 
Which of the following occurs in the spongy bone of the epiphysis? 


a. bone growth 

b. bone remodeling 
c. hematopoiesis 

d. shock absorption 


Solution: 


C 


Exercise: 


Problem: Which of the following are incapable of undergoing mitosis? 


a. osteoblasts and osteoclasts 
b. osteocytes and osteoclasts 
c. osteoblasts and osteocytes 
d. osteogenic cells and osteoclasts 


Solution: 


C 


Exercise: 


Problem: Which cells do not originate from osteogenic cells? 


a. osteoblasts 
b. osteoclasts 
c. osteocytes 
d. osteoprogenitor cells 


Solution: 


D 
Exercise: 


Problem: 


Which of the following are found in compact bone and cancellous 
bone? 


a. Haversian systems 
b. Haversian canals 
c. lamellae 

d. lacunae 


Solution: 


C 
Exercise: 


Problem: 


Which of the following are only found in spongy bone? Hint: See 
figure 15.9. 


a. canaliculi 


b. Volkmann’s canals 
c. trabeculae 
d. calcium salts 


Solution: 


C 
Exercise: 


Problem: 


The area of a bone where the nutrient foramen passes forms what kind 
of bone marking? 


a. a hole 
b. a facet 
c. a canal 
d. a fissure 


Solution: 


A 


Critical Thinking Questions 


Exercise: 


Problem: 


In what ways is the structural makeup of compact and spongy bone 
well suited to their respective functions? 


Solution: 


The densely packed concentric rings of matrix in compact bone are 
ideal for resisting compressive forces, which is the function of 


compact bone. The open spaces of the trabeculated network of spongy 
bone allow spongy bone to support shifts in weight distribution, which 
is the function of spongy bone. 


Glossary 


canaliculi 
(singular = canaliculus) channels within the bone matrix that house 
one of an osteocyte’s many cytoplasmic extensions that it uses to 
communicate and receive nutrients 


central canal 
longitudinal channel in the center of each osteon; contains blood 
vessels, nerves, and lymphatic vessels; also known as the Haversian 
canal 


compact bone 
dense osseous tissue that can withstand compressive forces 


diaphysis 
tubular shaft that runs between the proximal and distal ends of a long 
bone 


diploé 
layer of spongy bone, that is sandwiched between two the layers of 
compact bone found in flat bones 


epiphyseal plate 
(also, growth plate) sheet of hyaline cartilage in the metaphysis of an 
immature bone; replaced by bone tissue as the organ grows in length 


epiphysis 
wide section at each end of a long bone; filled with spongy bone and 
red marrow 


hole 
opening or depression in a bone 


lacunae 
(singular = lacuna) spaces in a bone that house an osteocyte 


medullary cavity 
hollow region of the diaphysis; filled with yellow marrow 


nutrient foramen 
small opening in the middle of the external surface of the diaphysis, 
through which an artery enters the bone to provide nourishment 


osteoblast 
cell responsible for forming new bone 


osteoclast 
cell responsible for resorbing bone 


osteocyte 
primary cell in mature bone; responsible for maintaining the matrix 


osteogenic cell 
undifferentiated cell with high mitotic activity; the only bone cells that 
divide; they differentiate and develop into osteoblasts 


osteon 
(also, Haversian system) basic structural unit of compact bone; made 
of concentric layers of calcified matrix 


spongy bone 
(also, cancellous bone) trabeculated osseous tissue that supports shifts 
in weight distribution 


trabeculae 
(singular = trabecula) spikes or sections of the lattice-like matrix in 
spongy bone 


Bone Formation and Development 
By the end of this section, you will be able to: 


e Explain the function of cartilage 

e List the steps of endochondral ossification 

e Explain the growth activity at the epiphyseal plate 

¢ Compare and contrast the processes of modeling and remodeling 


In the early stages of embryonic development, the embryo’s skeleton 
consists of fibrous membranes and hyaline cartilage. By the sixth or seventh 
week of embryonic life, the actual process of bone development, 
ossification, begins. 


Cartilage Templates 


Bone is a replacement tissue; that is, it uses a model tissue on which to lay 
down its mineral matrix. For skeletal development, the most common 
template is cartilage. During fetal development, a framework is laid down 
that determines where bones will form. Unlike most connective tissues, 
cartilage is avascular, meaning that it has no blood vessels supplying 
nutrients and removing metabolic wastes. All of these functions are carried 
on by diffusion through the matrix. This is why damaged cartilage does not 
repair itself as readily as most tissues do. 


Throughout fetal development and into childhood growth and development, 
bone forms on the cartilaginous matrix. By the time a fetus is born, most of 
the cartilage has been replaced with bone. Some additional cartilage will be 
replaced throughout childhood, and some cartilage remains in the adult 
skeleton. 


Endochondral Ossification 


In endochondral ossification, bone develops by replacing hyaline 
cartilage. Cartilage does not become bone. Instead, cartilage serves as a 
template to be completely replaced by new bone. 


In a long bone, for example, at about 6 to 8 weeks after conception, some of 
the mesenchymal cells differentiate into chondrocytes (cartilage cells) that 
form the cartilaginous skeletal precursor of the bones. 

Endochondral Ossification 


Perichondrium 


Primary 
ossification 
center 


Hyaline 
cartilage 
———— 


Calcified 
matrix 


Uncalcified 
matrix Uncalcified 


matrix 


(a) (b) Calcified 


matrix 


(c) Periosteum 
(covers compact 


bone) cavity 


Artery and vein 
(provide nutrients 
to bone) 


(d) 


Secondary 
ossification 
center 


Articular cartilage 
sa Artery 


, Uncalcified 
matrix 


Artery and vein 
(provide nutrients 
to bone) 


Endochondral ossification follows five steps. (a) 
Mesenchymal cells differentiate into chondrocytes. (b) 
The cartilage model of the future bony skeleton. (c) 


Capillaries penetrate cartilage. Primary ossification 
center develops. (d) Cartilage and chondrocytes continue 
to grow at ends of the bone. (e) Secondary ossification 
centers develop. (f) Cartilage remains at epiphyseal 
(growth) plate and at joint surface as articular cartilage. 


As more matrix is produced, the chondrocytes in the center of the 
cartilaginous model grow in size. As the matrix calcifies, nutrients can no 
longer reach the chondrocytes. This results in their death and the 
disintegration of the surrounding cartilage. Blood vessels invade the 
resulting spaces, not only enlarging the cavities but also carrying osteogenic 
cells with them, many of which will become osteoblasts. These enlarging 
Spaces eventually combine to become the medullary cavity. 


As the cartilage grows, capillaries penetrate it. This penetration initiates the 
transformation of the perichondrium into the bone-producing periosteum. 
Here, the osteoblasts form a periosteal collar of compact bone around the 
cartilage of the diaphysis. By the second or third month of fetal life, bone 
cell development and ossification ramps up and creates the primary 
ossification center, a region deep in the periosteal collar where ossification 
begins ({link]c). 


While these deep changes are occurring, chondrocytes and cartilage 
continue to grow at the ends of the bone (the future epiphyses), which 
increases the bone’s length at the same time bone is replacing cartilage in 
the diaphyses. By the time the fetal skeleton is fully formed, cartilage only 
remains at the joint surface as articular cartilage and between the diaphysis 
and epiphysis as the epiphyseal plate, the latter of which is responsible for 
the longitudinal growth of bones. After birth, this same sequence of events 
(matrix mineralization, death of chondrocytes, invasion of blood vessels 
from the periosteum, and seeding with osteogenic cells that become 
osteoblasts) occurs in the epiphyseal regions, and each of these centers of 
activity is referred to as a secondary ossification center ((link]e). 


How Bones Grow in Length 


The epiphyseal plate is the area of growth in a long bone. It is a layer of 
hyaline cartilage where ossification occurs in immature bones. On the 
epiphyseal side of the epiphyseal plate, cartilage is formed. On the 
diaphyseal side, cartilage is ossified, and the diaphysis grows in length. 


Bones continue to grow in length until early adulthood. When the 
chondrocytes in the epiphyseal plate cease their proliferation and bone 
replaces the cartilage, longitudinal growth stops. All that remains of the 
epiphyseal plate is the epiphyseal line ([link]). 

Progression from Epiphyseal Plate to Epiphyseal Line 


Epiphysis 
WZ Metaphysis 


Diaphysis 


Epiphyseal 
Epiphyseal line 
plate 
(growth 


plate) 


Ee Metaphysis ——f| > 
J __ |} —— Eriphysis ——{__U 


Femur 
(thighbone) 


(a) Growing long bone (b) Mature long bone 


As a bone matures, the epiphyseal plate 
progresses to an epiphyseal line. (a) 
Epiphyseal plates are visible in a growing 
bone. (b) Epiphyseal lines are the 
remnants of epiphyseal plates in a mature 
bone. 


How Bones Grow in Diameter 


While bones are increasing in length, they are also increasing in diameter; 
growth in diameter can continue even after longitudinal growth ceases. This 


is called appositional growth. Osteoclasts resorb old bone that lines the 
medullary cavity, while osteoblasts, via intramembranous ossification, 
produce new bone tissue beneath the periosteum. The erosion of old bone 
along the medullary cavity and the deposition of new bone beneath the 
periosteum not only increase the diameter of the diaphysis but also increase 
the diameter of the medullary cavity. This process is called modeling. 


Bone Remodeling 


The process in which matrix is resorbed on one surface of a bone and 
deposited on another is known as bone modeling. Modeling primarily takes 
place during a bone’s growth. However, in adult life, bone undergoes 
remodeling, in which resorption of old or damaged bone takes place on the 
same surface where osteoblasts lay new bone to replace that which is 
resorbed. Injury, exercise, and other activities lead to remodeling. Those 
influences are discussed later in the chapter, but even without injury or 
exercise, about 5 to 10 percent of the skeleton is remodeled annually just by 
destroying old bone and renewing it with fresh bone. 


Note: 

Diseases of the... 

Skeletal System 

Osteogenesis imperfecta (OI) is a genetic disease in which bones do not 
form properly and therefore are fragile and break easily. It is also called 
brittle bone disease. The disease is present from birth and affects a person 
throughout life. 

The genetic mutation that causes OI affects the body’s production of 
collagen, one of the critical components of bone matrix. The severity of the 
disease can range from mild to severe. Those with the most severe forms of 
the disease sustain many more fractures than those with a mild form. 
Frequent and multiple fractures typically lead to bone deformities and short 
stature. Bowing of the long bones and curvature of the spine are also 
common in people afflicted with OI. Curvature of the spine makes 
breathing difficult because the lungs are compressed. 


Because collagen is such an important structural protein in many parts of 
the body, people with OI may also experience fragile skin, weak muscles, 
loose joints, easy bruising, frequent nosebleeds, brittle teeth, blue sclera, 
and hearing loss. There is no known cure for OI. Treatment focuses on 
helping the person retain as much independence as possible while 
minimizing fractures and maximizing mobility. Toward that end, safe 
exercises, like swimming, in which the body is less likely to experience 
collisions or compressive forces, are recommended. Braces to support legs, 
ankles, knees, and wrists are used as needed. Canes, walkers, or 
wheelchairs can also help compensate for weaknesses. 

When bones do break, casts, splints, or wraps are used. In some cases, 
metal rods may be surgically implanted into the long bones of the arms and 
legs. Research is currently being conducted on using bisphosphonates to 
treat OI. Smoking and being overweight are especially risky in people with 
OI, since smoking is known to weaken bones, and extra body weight puts 
additional stress on the bones. 


Chapter Review 


All bone formation is a replacement process. Embryos develop a 
cartilaginous skeleton and various membranes. During development, these 
are replaced by bone during the ossification process. In endochondral 
ossification, bone develops by replacing hyaline cartilage. Activity in the 
epiphyseal plate enables bones to grow in length. Modeling allows bones to 
grow in diameter. Remodeling occurs as bone is resorbed and replaced by 
new bone. Osteogenesis imperfecta is a genetic disease in which collagen 
production is altered, resulting in fragile, brittle bones. 


Review Questions 


Exercise: 


Problem: Why is cartilage slow to heal? 


a. because it eventually develops into bone 


b. because it is semi-solid and flexible 
c. because it does not have a blood supply 
d. because endochondral ossification replaces all cartilage with bone 


Solution: 
C 
Exercise: 
Problem:Bones grow in length due to activity in the 
a. epiphyseal plate 
b. perichondrium 


c. periosteum 
d. medullary cavity 


Solution: 


A 


Glossary 


endochondral ossification 
process in which bone forms by replacing hyaline cartilage 


epiphyseal line 
completely ossified remnant of the epiphyseal plate 


modeling 
process, during bone growth, by which bone is resorbed on one surface 
of a bone and deposited on another 


ossification 
(also, osteogenesis) bone formation 


remodeling 
process by which osteoclasts resorb old or damaged bone at the same 
time as and on the same surface where osteoblasts form new bone to 
replace that which is resorbed 


Muscle Contraction and Locomotion 
By the end of this section, you will be able to: 


¢ Classify the different types of muscle tissue 
e Explain the role of muscles in locomotion 


Muscle cells are specialized for contraction. Muscles allow for motions 
such as walking, and they also facilitate bodily processes such as respiration 
and digestion. The body contains three types of muscle tissue: skeletal 
muscle, cardiac muscle, and smooth muscle ((link]). 


* 
* -v 


Skeletal muscle Smooth muscle Cardiac muscle 


The body contains three types of muscle tissue: skeletal muscle, 
smooth muscle, and cardiac muscle, visualized here using light 
microscopy. Skeletal muscle cells are long, striated, and 
multinucleate. Smooth muscle cells are short, tapered at each end, 
and have only one plump nucleus in each. Cardiac muscle cells 
are branched and striated, but short. They also can have more than 
one nucleus per cell. (credit: modification of work by NCI, NIH; 
scale-bar data from Matt Russell) 


Skeletal muscle tissue forms skeletal muscles, which attach to bones or 
skin and control locomotion and any movement that can be consciously 
controlled. Because it can be controlled by thought, skeletal muscle is also 
called voluntary muscle. Skeletal muscles are long and cylindrical in 
appearance; when viewed under a microscope, skeletal muscle tissue has a 
striped or striated appearance. The striations are caused by the regular 
arrangement of contractile proteins (actin and myosin). Actin is a 
filamentous contractile protein that interacts with another filamentous 


protein called myosin for muscle contraction to occur. Skeletal muscle also 
has multiple nuclei present in a single cell. 


Smooth muscle tissue occurs in the walls of hollow organs such as the 
intestines, stomach, and urinary bladder, and around passages such as the 
respiratory tract and blood vessels. Smooth muscle has no striations, is not 
under voluntary control, has only one nucleus per cell, is tapered at both 
ends, and is called involuntary muscle. 


Cardiac muscle tissue is only found in the heart, and cardiac contractions 
pump blood throughout the body and maintain blood pressure. Like skeletal 
muscle, cardiac muscle is striated, but unlike skeletal muscle, cardiac 
muscle cannot be consciously controlled and is called involuntary muscle. 
Cardiac muscle cells can have more than one nucleus per cell, are branched, 
and are distinguished by the presence of intercalated disks. 


Skeletal Muscle Fiber Structure 


Each skeletal muscle fiber is a skeletal muscle cell. These cells are 
incredibly large, with diameters of up to 100 ym and lengths of up to 30 
cm. The plasma membrane of a skeletal muscle fiber is called the 
sarcolemma. The sarcolemma is the site of action potential conduction, 
which triggers muscle contraction. Within each muscle fiber are myofibrils 
—long cylindrical structures that lie parallel to the muscle fiber. Myofibrils 
run the entire length of the muscle fiber, and because they are only 
approximately 1.2 jam in diameter, hundreds to thousands can be found 
inside one muscle fiber. They attach to the sarcolemma at their ends, so that 
as myofibrils shorten, the entire muscle cell contracts ([Link]). 


Sarcolemma 


Sarcoplasm 


Striations 


Muscle fiber 


A skeletal muscle cell is surrounded by a plasma membrane called 
the sarcolemma with a cytoplasm called the sarcoplasm. A muscle 
fiber is composed of many fibrils, packaged into orderly units. 


The striated appearance of skeletal muscle tissue is a result of repeating 
bands of the proteins actin and myosin that are present along the length of 
myofibrils. The alignment of myofibrils in the cell causes the entire cell to 
appear striated or banded. 


The Z lines mark the border of units called sarcomeres, which are the 
functional units of skeletal muscle. A myofibril is composed of many 
sarcomeres running along its length, and as the sarcomeres individually 
contract, the myofibrils and muscle cells shorten ((Llink]). 


Z line Sarcomere 


M line 


Thin filament Thick filament 


Myofibril 


A sarcomere is the region from 
one Z line to the next Z line. Many 
sarcomeres are present in a 
myofibril, resulting in the striation 
pattern characteristic of skeletal 
muscle. 


Myofibrils are composed of smaller structures called myofilaments. There 
are two main types of filaments: thick filaments and thin filaments; each 
has different compositions and locations. Thick filaments (composed of the 
protein myosin) and Thin filaments (composed of the protein actin). 


The myosin thick filaments contain two regions designated as the head and 
the tail. These regions are important in the process of muscle contraction 
and will be discussed in more detail. Two components of the thin filaments 
are tropomyosin and troponin. Actin has binding sites for myosin 
attachment. Strands of tropomyosin block the binding sites and prevent 
actin—myosin interactions when the muscles are at rest. Troponin consists of 
three globular subunits. One subunit binds to tropomyosin, one subunit 
binds to actin, and one subunit binds Ca?* ions. 


Sliding Filament Model of Contraction 


For a muscle cell to contract, the sarcomere must shorten. However, thick 
and thin filaments—the components of sarcomeres—do not shorten. 
Instead, they slide by one another, causing the sarcomere to shorten while 
the filaments remain the same length. The sliding filament theory of muscle 
contraction was developed to fit the differences observed in the named 
bands on the sarcomere at different degrees of muscle contraction and 
relaxation. The mechanism of contraction is the binding of myosin to actin, 
forming cross-bridges that generate filament movement ([link]). 


(a) Thin filament Thick filaments 


(actin) (myosin) 
Z line M line Z line 
aaa naan naan aaaaall Sea ceemeeeeeeeeeceeeeal 
Set: Doxa cee eeeeeeeeeeeeeeeel 
EEE Dc cae cee eeceeeeeeeeeeeel 
SEER SE EEEMEEEEL AIEEE ea 
Stteeeteieeettttttettts: >>> 
Stitt >>> > 
SESE ESSE ESSERE 


(b) 


| a | 


| band A band | band 


When (a) a sarcomere (b) contracts, the Z lines move closer 
together and the I band gets smaller. The A band stays the same 
width and, at full contraction, the thin filaments overlap. 


When a sarcomere shortens, some regions shorten whereas others stay the 
same length. A sarcomere is defined as the distance between two 
consecutive Z lines; when a muscle contracts, the distance between the Z 
lines is reduced. Thin filaments are pulled by the thick filaments toward the 
center of the sarcomere until the Z lines approach the thick filaments. The 
zone of overlap, in which thin filaments and thick filaments occupy the 
same area, increases as the thin filaments move inward. 


ATP and Muscle Contraction 


The motion of muscle shortening occurs as myosin heads bind to actin and 
pull the actin inwards. This action requires energy, which is provided by 
ATP. Myosin binds to actin at a binding site on the actin protein. Myosin 
has another binding site for ATP at which enzymatic activity hydrolyzes 
ATP to ADP, releasing an inorganic phosphate molecule and energy. 


ATP binding causes myosin to release actin, allowing actin and myosin to 
detach from each other. After this happens, the newly bound ATP is 
converted to ADP and inorganic phosphate, P;. The enzyme at the binding 
site on myosin is called ATPase. The energy released during ATP hydrolysis 
changes the angle of the myosin head into a “cocked” position. The myosin 
head is then in a position for further movement, possessing potential energy, 
but ADP and P; are still attached. If actin binding sites are covered and 
unavailable, the myosin will remain in the high energy configuration with 
ATP hydrolyzed, but still attached. 


If the actin binding sites are uncovered, a cross-bridge will form; that is, the 
myosin head spans the distance between the actin and myosin molecules. P; 
is then released, allowing myosin to expend the stored energy as a 
conformational change. The myosin head moves toward the M line, pulling 
the actin along with it. As the actin is pulled, the filaments move 
approximately 10 nm toward the M line. This movement is called the power 
stroke, as it is the step at which force is produced. As the actin is pulled 
toward the M line, the sarcomere shortens and the muscle contracts. 


When the myosin head is “cocked,” it contains energy and is in a high- 
energy configuration. This energy is expended as the myosin head moves 
through the power stroke; at the end of the power stroke, the myosin head is 
in a low-energy position. After the power stroke, ADP is released; however, 
the cross-bridge formed is still in place, and actin and myosin are bound 
together. ATP can then attach to myosin, which allows the cross-bridge 
cycle to start again and further muscle contraction can occur ([link]). 


Note: 


Art Connection 


Tropomyosin 


y GY. 


The active site on actin is 


exposed as Ca?* binds 2 y 
~ Active site 


troponin. : 
Myosin head 
e. myosin head forms 
a cross-bridge with actin. 


During the power stroke, 

@® the myosin head bends, 
and ADP and phosphate 
are released. 


Anew molecule of ATP 
@ attaches to the myosin 

head, causing the 

cross-bridge to detach. 


ATP hydrolyzes to ADP 
6 and phosphate, which 

returns the myosin to the 

“cocked” position. 


The cross-bridge muscle 
contraction cycle, which is 
triggered by Ca** binding to the 
actin active site, is shown. With 
each contraction cycle, actin 
moves relative to myosin. 


Regulatory Proteins 


When a muscle is in a resting state, actin and myosin are separated. To keep 
actin from binding to the active site on myosin, regulatory proteins block 


the molecular binding sites. Tropomyosin blocks myosin binding sites on 
actin molecules, preventing cross-bridge formation and preventing 
contraction in a muscle without nervous input. Troponin binds to 
tropomyosin and helps to position it on the actin molecule; it also binds 
calcium ions. 


To enable a muscle contraction, tropomyosin must change conformation, 
uncovering the myosin-binding site on an actin molecule and allowing 
cross-bridge formation. This can only happen in the presence of calcium, 
which is kept at extremely low concentrations in the sarcoplasm. If present, 
calcium ions bind to troponin, causing conformational changes in troponin 
that allow tropomyosin to move away from the myosin binding sites on 
actin. Once the tropomyosin is removed, a cross-bridge can form between 
actin and myosin, triggering contraction. Cross-bridge cycling continues 
until Ca** ions and ATP are no longer available and tropomyosin again 
covers the binding sites on actin. 


Excitation—Contraction Coupling 


Excitation—contraction coupling is the link (transduction) between the 
action potential generated in the sarcolemma and the start of a muscle 
contraction. The trigger for calcium release from the sarcoplasmic 
reticulum into the sarcoplasm is a neural signal. Each skeletal muscle fiber 
is controlled by a motor neuron, which conducts signals from the brain or 
spinal cord to the muscle. The area of the sarcolemma on the muscle fiber 
that interacts with the neuron is called the motor end plate. The end of the 
neuron’s axon is called the synaptic terminal, and it does not actually 
contact the motor end plate. A small space called the synaptic cleft 
separates the synaptic terminal from the motor end plate. Electrical signals 
travel along the neuron’s axon, which branches through the muscle and 
connects to individual muscle fibers at a neuromuscular junction. 


The ability of cells to communicate electrically requires that the cells 
expend energy to create an electrical gradient across their cell membranes. 
This charge gradient is carried by ions, which are differentially distributed 
across the membrane. Each ion exerts an electrical influence and a 
concentration influence. Just as milk will eventually mix with coffee 


without the need to stir, ions also distribute themselves evenly, if they are 
permitted to do so. In this case, they are not permitted to return to an evenly 
mixed state. 


Transport proteins called sodium-potassium pumps use cellular energy 
(ATP) to pump two K" ions inside the cell and three Na” ions outside at the 
same time. Therefore, a concentration gradient for both ions exists across 
the plasma membrane. This alone accumulates a small electrical charge, but 
a big concentration gradient. There is lots of K* in the cell and lots of Na* 
outside the cell. Potassium is able to leave the cell through K* channels that 
are open 90% of the time, and it does. However, Na™ channels are rarely 
open, so Na” remains outside the cell. When K" leaves the cell, obeying its 
concentration gradient, that effectively leaves a negative charge behind. So 
at rest, there is a large concentration gradient for Na‘ to enter the cell, and 
there is an accumulation of negative charges left behind in the cell. This is 
the resting membrane potential. Potential in this context means a separation 
of electrical charge that is capable of doing work. It is measured in volts, 
just like a battery. However, the transmembrane potential is considerably 
smaller (0.07 V); therefore, the small value is expressed as millivolts (mV) 
or 70 mV. Because the inside of a cell is negative compared with the 
outside, a minus sign signifies the excess of negative charges inside the cell, 
—70 mV. 


If an event changes the permeability of the membrane to Na’ ions, they will 
enter the cell. That will change the voltage. This is an electrical event, 
called an action potential, that can be used as a cellular signal. 
Communication occurs between nerves and muscles through 
neurotransmitters. Neuron action potentials cause the release of 
neurotransmitters from the synaptic terminal into the synaptic cleft, where 
they can then diffuse across the synaptic cleft and bind to a receptor 
molecule on the motor end plate. The motor end plate possesses junctional 
folds—folds in the sarcolemma that create a large surface area for the 
neurotransmitter to bind to receptors. The receptors are actually sodium 
channels that open to allow the passage of Na’ into the cell when they 
receive neurotransmitter signal. 


Acetylcholine (ACh) is a neurotransmitter released by motor neurons that 
binds to receptors in the motor end plate. Neurotransmitter release occurs 
when an action potential travels down the motor neuron’s axon, resulting in 
altered permeability of the synaptic terminal membrane and an influx of 
calcium. The Ca?* ions allow synaptic vesicles to move to and bind with the 
presynaptic membrane (on the neuron), and release neurotransmitter from 
the vesicles into the synaptic cleft. Once released by the synaptic terminal, 
ACh diffuses across the synaptic cleft to the motor end plate, where it binds 
with ACh receptors. As a neurotransmitter binds, these ion channels open, 
and Na’ ions cross the membrane into the muscle cell. This reduces the 
voltage difference between the inside and outside of the cell, which is called 
depolarization. As ACh binds at the motor end plate, this depolarization is 
called an end-plate potential. The depolarization then spreads along the 
sarcolemma, creating an action potential as sodium channels adjacent to the 
initial depolarization site sense the change in voltage and open. The action 
potential moves across the entire cell, creating a wave of depolarization. 


ACh is broken down by the enzyme acetylcholinesterase (AChE) into 
acetyl and choline. AChE resides in the synaptic cleft, breaking down ACh 
so that it does not remain bound to ACh receptors, which would cause 
unwanted extended muscle contraction ([link]). 


Note: 
Art Connection 


(a) 


Axon terminal 


Synaptic vesicles 


: Sarcolemma 
Acetylcholine (muscle cell 
receptor plasma 


Synaptic cleft membrane) 


Acetylcholine Acetylcholine 


Acetylcholinesterase 


Sarcoplasmic 
reticulum 
(muscle cell 
endoplasmic 
reticulum) 
1. Acetylcholine released from the axon 5. Acetylcholinesterase removes acetylcholine 
terminal binds to receptors on the from the synaptic cleft. 
sarcolemma. 6. Ca?* is transported back into the 
2. An action potential is generated and travels sarcoplasmic reticulum. 
down the T tubule. 7. Tropomyosin binds active sites on actin 
3. Ca** is released from the sarcoplasmic causing the cross-bridge to detach. 
reticulum in response to the change in 
voltage. 


4. Ca?* binds troponin; Cross-bridges form 
between actin and myosin. 


This diagram shows excitation-contraction 
coupling in a skeletal muscle contraction and 
contains details not included in the text. Therefore, 
it is essential that you read it carefully and study 
each step. The sarcoplasmic reticulum (SR) is a 
specialized endoplasmic reticulum found in 
muscle cells that stores calcium ions. The action 
potential within skeletal muscle travels down the T 
(Transverse) tubules and triggers the release of 
calcium ions from the SR. The calcium ions bind 
with troponin/tropomyosin to uncover the myosin 
binding sites so that contraction can occur. 


After depolarization, the membrane returns to its resting state. This is called 
repolarization, during which voltage-gated sodium channels close. 
Potassium channels continue at 90% conductance. Because the plasma 
membrane sodium—potassium ATPase always transports ions, the resting 
State (negatively charged inside relative to the outside) is restored. The 
period immediately following the transmission of an impulse in a nerve or 
muscle, in which a neuron or muscle cell regains its ability to transmit 
another impulse, is called the refractory period. During the refractory 
period, the membrane cannot generate another action potential. . The 
refractory period allows the voltage-sensitive ion channels to return to their 
resting configurations. The sodium potassium ATPase continually moves 
Na’ back out of the cell and K* back into the cell, and the K* leaks out 
leaving negative charge behind. Very quickly, the membrane repolarizes, so 
that it can again be depolarized. 


Control of Muscle Tension 


Neural control initiates the formation of actin—myosin cross-bridges, 
leading to the sarcomere shortening involved in muscle contraction. These 
contractions extend from the muscle fiber through connective tissue to pull 
on bones, causing skeletal movement. The pull exerted by a muscle is 
called tension, and the amount of force created by this tension can vary. 
This enables the same muscles to move very light objects and very heavy 
objects. In individual muscle fibers, the amount of tension produced 
depends on the cross-sectional area of the muscle fiber and the frequency of 
neural stimulation. 


The number of cross-bridges formed between actin and myosin determine 
the amount of tension that a muscle fiber can produce. Cross-bridges can 
only form where thick and thin filaments overlap, allowing myosin to bind 
to actin. If more cross-bridges are formed, more myosin will pull on actin, 
and more tension will be produced. 


The ideal length of a sarcomere during production of maximal tension 
occurs when thick and thin filaments overlap to the greatest degree. If a 
sarcomere at rest is stretched past an ideal resting length, thick and thin 
filaments do not overlap to the greatest degree, and fewer cross-bridges can 


form. This results in fewer myosin heads pulling on actin, and less tension 
is produced. As a sarcomere is shortened, the zone of overlap is reduced as 
the thin filaments reach the H zone, which is composed of myosin tails. 
Because it is myosin heads that form cross-bridges, actin will not bind to 
myosin in this zone, reducing the tension produced by this myofiber. If the 
sarcomere is shortened even more, thin filaments begin to overlap with each 
other—reducing cross-bridge formation even further, and producing even 
less tension. Conversely, if the sarcomere is stretched to the point at which 
thick and thin filaments do not overlap at all, no cross-bridges are formed 
and no tension is produced. This amount of stretching does not usually 
occur because accessory proteins, internal sensory nerves, and connective 
tissue oppose extreme stretching. 


The primary variable determining force production is the number of 
myofibers within the muscle that receive an action potential from the 
neuron that controls that fiber. When using the biceps to pick up a pencil, 
the motor cortex of the brain only signals a few neurons of the biceps, and 
only a few myofibers respond. In vertebrates, each myofiber responds fully 
if stimulated. When picking up a piano, the motor cortex signals a majority 
of the neurons in the biceps and most myofibers participate. This is close to 
the maximum force the muscle can produce. As mentioned above, 
increasing the frequency of action potentials (the number of signals per 
second) can increase the force a bit more, because the tropomyosin is 
flooded with calcium. Even at maximum voluntary contraction, not all 
motor units are active simultaneously; at any given moment, some of them 
are at rest on a rotational basis. 


Section Summary 


The body contains three types of muscle tissue: skeletal muscle, cardiac 
muscle, and smooth muscle. Skeletal muscle tissue is composed of 
sarcomeres, the functional units of muscle tissue. Muscle contraction occurs 
when sarcomeres shorten, as thick and thin filaments slide past each other, 
which is called the sliding filament model of muscle contraction. ATP 
provides the energy for cross-bridge formation and filament sliding. 
Regulatory proteins, such as troponin and tropomyosin, control cross-bridge 
formation. Excitation—contraction coupling transduces the electrical signal 


of the neuron, via acetylcholine, to an electrical signal on the muscle 
membrane, which initiates force production. The number of muscle fibers 
contracting determines how much force the whole muscle produces. 


Art Connections 


Exercise: 


Problem: 


[link] Which of the following statements about muscle contraction is 
true? 


a. The power stroke occurs when ATP is hydrolyzed to ADP and 
phosphate. 

b. The power stroke occurs when ADP and phosphate dissociate 
from the myosin head. 

c. The power stroke occurs when ADP and phosphate dissociate 
from the actin active site. 

d. The power stroke occurs when Ca?* binds the calcium head. 


Solution: 


[link] B 
Exercise: 
Problem: 
[link] The deadly nerve gas Sarin irreversibly inhibits 


acetycholinesterase. What effect would Sarin have on muscle 
contraction? 


Solution: 
[link] In the presence of Sarin, acetycholine is not removed from the 


synapse, resulting in continuous stimulation of the muscle plasma 
membrane. At first, muscle activity is intense and uncontrolled, but the 


ion gradients dissipate, so electrical signals in the T-tubules are no 
longer possible. The result is paralysis, leading to death by 
asphyxiation. 


Review Questions 


Exercise: 


Problem: 


In relaxed muscle, the myosin-binding site on actin is blocked by 


a. titin 

b. troponin 

c. myoglobin 
d. tropomyosin 


Solution: 


D 
Exercise: 
Problem:The cell membrane of a muscle fiber is called a 
a. myofibril 
b. sarcolemma 


c. sarcoplasm 
d. myofilament 


Solution: 


B 


Exercise: 


Problem: 


The muscle relaxes if no new nerve signal arrives. However the 
neurotransmitter from the previous stimulation is still present in the 
synapse. The activity of helps to remove this 
neurotransmitter. 


a. myosin 

b. action potential 

c. tropomyosin 

d. acetylcholinesterase 


Solution: 


D 


Free Response 


Exercise: 


Problem: 


How would muscle contractions be affected if ATP was completely 
depleted in a muscle fiber? 


Solution: 

Because ATP is required for myosin to release from actin, muscles 
would remain rigidly contracted until more ATP was available for the 
myosin cross-bridge release. This is why dead vertebrates undergo 
rigor mortis. 


Glossary 


actin 


globular contractile protein that interacts with myosin for muscle 
contraction 


acetylcholinesterase 
(AChE) enzyme that breaks down ACh into acetyl and choline 


cardiac muscle 
tissue muscle tissue found only in the heart; cardiac contractions pump 
blood throughout the body and maintain blood pressure 


motor end plate 
sarcolemma of the muscle fiber that interacts with the neuron 


myofibril 
long cylindrical structures that lie parallel to the muscle fiber 


myofilament 
small structures that make up myofibrils 


myosin 
contractile protein that interacts with actin for muscle contraction 


sarcolemma 
plasma membrane of a skeletal muscle fiber 


sarcomere 
functional unit of skeletal muscle 


skeletal muscle tissue 
forms skeletal muscles, which attach to bones and control locomotion 
and any movement that can be consciously controlled 


smooth muscle 
tissue occurs in the walls of hollow organs such as the intestines, 
stomach, and urinary bladder, and around passages such as the 
respiratory tract and blood vessels 


thick filament 
a group of myosin molecules 


thin filament 
two polymers of actin wound together along with tropomyosin and 
troponin 


tropomyosin 
acts to block myosin binding sites on actin molecules, preventing 
cross-bridge formation and preventing contraction until a muscle 
receives a neuron signal 


troponin 
binds to tropomyosin and helps to position it on the actin molecule, 
and also binds calcium ions 


Introduction to the Nervous System 
class="introduction" 


An athlete’s 
nervous 
system is 
hard at work 
during the 
planning 
and 
execution of 
a movement 
as precise as 
a high jump. 
Parts of the 
nervous 
system are 
involved in 
determining 
how hard to 
push off and 
when to 
turn, as well 
as 
controlling 
the muscles 
throughout 
the body 
that make 
this 
complicated 
movement 
possible 
without 
knocking 
the bar 
down—all 


in just a few 
seconds. 
(credit: 
modificatio 
n of work 
by Shane T. 
McCoy, 
U.S. Navy) 


= 


SAWYS RKiON © 
QWariivg OA 


When you’re reading this book, your nervous system is performing several 
functions simultaneously. The visual system is processing what is seen on 
the page; the motor system controls the turn of the pages (or click of the 
mouse); the prefrontal cortex maintains attention. Even fundamental 
functions, like breathing and regulation of body temperature, are controlled 
by the nervous system. A nervous system is an organism’s control center: it 
processes sensory information from outside (and inside) the body and 
controls all behaviors—from eating to sleeping to finding a mate. 


Neurons and Glial Cells 
By the end of this section, you will be able to: 


e List and describe the functions of the structural components of a 
neuron 

e Describe the structure multipolar neurons 

e State the general function of glial cells 


The nervous system is made up of neurons, specialized cells that can 
receive and transmit chemical or electrical signals, and glia, cells that 
provide support functions for the neurons by playing an information 
processing role that is complementary to neurons. A neuron can be 
compared to an electrical wire—it transmits a signal from one place to 
another. Glia can be compared to the workers at the electric company who 
make sure wires go to the right places, maintain the wires, and take down 
wires that are broken. Although glia have been compared to workers, recent 
evidence suggests that also usurp some of the signaling functions of 
neurons. 


There is great diversity in the types of neurons and glia that are present in 
different parts of the nervous system. There are four major types of neurons, 
and they share several important cellular components. 


Neurons 


The nervous system of the common laboratory fly, Drosophila 
melanogaster, contains around 100,000 neurons, the same number as a 
lobster. This number compares to 75 million in the mouse and 300 million 
in the octopus. A human brain contains around 86 billion neurons. Despite 
these very different numbers, the nervous systems of these animals control 
many of the same behaviors—from basic reflexes to more complicated 
behaviors like finding food and courting mates. The ability of neurons to 
communicate with each other as well as with other types of cells underlies 
all of these behaviors. 


Most neurons share the same cellular components. But neurons are also 
highly specialized—different types of neurons have different sizes and 


shapes that relate to their functional roles. 


Parts of a Neuron 


Like other cells, each neuron has a cell body that contains a nucleus, 
smooth and rough endoplasmic reticulum, Golgi apparatus, mitochondria, 
and other cellular components. Neurons also contain unique structures, 
illustrated in [link] for receiving and sending the electrical signals that make 
neuronal communication possible. Dendrites are tree-like structures that 
extend away from the cell body to receive messages from other neurons at 
specialized junctions called synapses. Although some neurons do not have 
any dendrites, some types of neurons have multiple dendrites. Dendrites can 
have small protrusions called dendritic spines, which further increase 
surface area for possible synaptic connections. 


Once a signal is received by the dendrite, it then travels passively to the cell 
body. The cell body contains a specialized structure, the axon hillock that 
integrates signals from multiple synapses and serves as a junction between 
the cell body and an axon. An axon is a tube-like structure that propagates 
the integrated signal to specialized endings called axon terminals. These 
terminals in turn synapse on other neurons, muscle, or target organs. 
Chemicals released at axon terminals allow signals to be communicated to 
these other cells. Neurons usually have one or two axons, but some neurons, 
like amacrine cells in the retina, do not contain any axons. Some axons are 
covered with myelin, which acts as an insulator to minimize dissipation of 
the electrical signal as it travels down the axon, greatly increasing the speed 
on conduction. This insulation is important as the axon from a human motor 
neuron can be as long as a meter—from the base of the spine to the toes. 
The myelin sheath is not actually part of the neuron. Myelin is produced by 
glial cells. Along the axon there are periodic gaps in the myelin sheath. 
These gaps are called nodes of Ranvier and are sites where the signal is 
“recharged” as it travels along the axon. 


It is important to note that a single neuron does not act alone—neuronal 
communication depends on the connections that neurons make with one 
another (as well as with other cells, like muscle cells). Dendrites from a 


single neuron may receive synaptic contact from many other neurons. For 
example, dendrites from a Purkinje cell in the cerebellum are thought to 
receive contact from as many as 200,000 other neurons. 


Note: 
Art Connection 


Cell body (soma) 


Oligodendrocyte 


Node of Ranvier 


Cell membrane 


Dendrite 


Myelin sheath 


Synapse — ; ‘\ \\- 


Neurons contain organelles common to many other cells, 
such as a nucleus and mitochondria. They also have more 
specialized structures, including dendrites and axons. 


Types of Neurons 


There are different types of neurons, and the functional role of a given 
neuron is intimately dependent on its structure. There is an amazing 


diversity of neuron shapes and sizes found in different parts of the nervous 
system (and across species), as illustrated by the neurons shown in [Link]. 


aff an 


TERIA 


(a) Pyramidal cell of the (b) Purkinje cell of the (c) Olfactory neurons 
cerebral cortex cerebellar cortex 


There is great diversity in the size and shape of neurons 
throughout the nervous system. Examples include (a) a 
pyramidal cell from the cerebral cortex, (b) a Purkinje cell 
from the cerebellar cortex, and (c) olfactory cells from the 
olfactory epithelium and olfactory bulb. 


Multipolar neurons are the most common type of neuron. Each multipolar 
neuron contains one axon and multiple dendrites. Multipolar neurons can be 
found in the central nervous system (brain and spinal cord). An example of 
a multipolar neuron is a Purkinje cell in the cerebellum, which has many 
branching dendrites but only one axon. 


Unipolar neuron Multipolar neuron 


Bipolar neuron Pseudounipolar neuron 


Neurons are broadly divided into four main types based on the 
number and placement of axons: (1) unipolar, (2) bipolar, (3) 
multipolar, and (4) pseudounipolar. 


Note: 

Everyday Connection 

Neurogenesis 

At one time, scientists believed that people were born with all the neurons 
they would ever have. Research performed during the last few decades 
indicates that neurogenesis, the birth of new neurons, continues into 
adulthood. Neurogenesis was first discovered in songbirds that produce 
new neurons while learning songs. For mammals, new neurons also play 
an important role in learning: about 1000 new neurons develop in the 
hippocampus (a brain structure involved in learning and memory) each 
day. While most of the new neurons will die, researchers found that an 
increase in the number of surviving new neurons in the hippocampus 
correlated with how well rats learned a new task. Interestingly, both 
exercise and some antidepressant medications also promote neurogenesis 
in the hippocampus. Stress has the opposite effect. While neurogenesis is 


quite limited compared to regeneration in other tissues, research in this 
area may lead to new treatments for disorders such as Alzheimer’s, stroke, 
and epilepsy. 

How do scientists identify new neurons? A researcher can inject a 
compound called bromodeoxyuridine (BrdU) into the brain of an animal. 
While all cells will be exposed to BrdU, BrdU will only be incorporated 
into the DNA of newly generated cells that are in S phase. A technique 
called immunohistochemistry can be used to attach a fluorescent label to 
the incorporated BrdU, and a researcher can use fluorescent microscopy to 
visualize the presence of BrdU, and thus new neurons, in brain tissue. 
[link] is a micrograph which shows fluorescently labeled neurons in the 
hippocampus of a rat. 


BrdU/Nestin 


Astrocyte 


This micrograph shows 
fluorescently labeled new 
neurons in a rat hippocampus. 
Cells that are actively dividing 
have bromodoxyuridine (BrdU) 
incorporated into their DNA 
and are labeled in red. Cells that 
express glial fibrillary acidic 
protein (GFAP) are labeled in 
green. Astrocytes, but not 
neurons, express GFAP. Thus, 
cells that are labeled both red 
and green are actively dividing 
astrocytes, whereas cells labeled 


red only are actively dividing 
neurons. (credit: modification of 
work by Dr. Maryam Faiz, et. 
al., University of Barcelona; 
scale-bar data from Matt 
Russell) 


Glia 


While glia are often thought of as the supporting cast of the nervous system, 
the number of glial cells in the brain actually outnumbers the number of 
neurons by a factor of ten. Neurons would be unable to function without the 
vital roles that are fulfilled by these glial cells. Glia guide developing 
neurons to their destinations, buffer ions and chemicals that would 
otherwise harm neurons, and provide myelin sheaths around axons. 
Scientists have recently discovered that they also play a role in responding 
to nerve activity and modulating communication between nerve cells. When 
glia do not function properly, the result can be disastrous—most brain 
tumors are caused by mutations in glia. 


Section Summary 


The nervous system is made up of neurons and glia. Neurons are 
specialized cells that are capable of sending electrical as well as chemical 
signals. Most neurons contain dendrites, which receive these signals, and 
axons that send signals to other neurons or tissues. There are four main 
types of neurons: unipolar, bipolar, multipolar, and pseudounipolar neurons. 
Glia are non-neuronal cells in the nervous system that support neuronal 
development and signaling. There are several types of glia that serve 
different functions. 


Review Questions 


Exercise: 


Problem: 


Neurons contain , which can receive signals from other 
neurons. 


a. axons 
b. mitochondria 
c. dendrites 

d. Golgi bodies 


Solution: 
C 
Exercise: 
Problem: A(n) neuron has one axon and multiple dendrites. 
a. unipolar 
b. bipolar 


c. multipolar 
d. pseudounipolar 


Solution: 


C 


Free Response 


Exercise: 


Problem: 


How are neurons similar to other cells? How are they unique? 


Solution: 


Neurons contain organelles common to all cells, such as a nucleus and 
mitochondria. They are unique because they contain dendrites, which 
can receive signals from other neurons, and axons that can send these 
signals to other cells. 


Exercise: 


Problem: 


Multiple sclerosis causes demyelination of axons in the brain and 
spinal cord. Why is this problematic? 


Solution: 


Myelin provides insulation for signals traveling along axons. Without 
myelin, signal transmission can slow down and degrade over time. 
This would slow down neuronal communication across the nervous 
system and affect all downstream functions. 


Glossary 


axon 
tube-like structure that propagates a signal from a neuron’s cell body to 
axon terminals 


axon hillock 
electrically sensitive structure on the cell body of a neuron that 
integrates signals from multiple neuronal connections 


axon terminal 
structure on the end of an axon that can form a synapse with another 
neuron 


dendrite 
structure that extends away from the cell body to receive messages 
from other neurons 


glia 
(also, glial cells) cells that provide support functions for neurons 


myelin 
fatty substance produced by glia that insulates axons 


neuron 
specialized cell that can receive and transmit electrical and chemical 
signals 


nodes of Ranvier 
gaps in the myelin sheath where the signal is recharged 


synapse 
junction between two neurons where neuronal signals are 
communicated 


How Neurons Communicate 
By the end of this section, you will be able to: 


e Describe the basis of the resting membrane potential 

e Explain the stages of an action potential and how action potentials are 
propagated 

e Explain how chemical synapses function 


All functions performed by the nervous system—from a simple motor 
reflex to more advanced functions like making a memory or a decision— 
require neurons to communicate with one another. While humans use words 
and body language to communicate, neurons use electrical and chemical 
signals. Just like a person in a committee, one neuron usually receives and 
synthesizes messages from multiple other neurons before “making the 
decision” to send the message on to other neurons. 


Nerve Impulse Transmission within a Neuron 


For the nervous system to function, neurons must be able to send and 
receive signals. These signals are possible because each neuron has a 
charged cellular membrane (a voltage difference between the inside and the 
outside), and the charge of this membrane can change in response to 
neurotransmitter molecules released from other neurons and environmental 
stimuli. To understand how neurons communicate, one must first 
understand the basis of the baseline or ‘resting’ membrane charge. 


Neuronal Charged Membranes 


The lipid bilayer membrane that surrounds a neuron is impermeable to 
charged molecules or ions. To enter or exit the neuron, ions must pass 
through special proteins called ion channels that span the membrane. Ion 
channels have different configurations: open, closed, and inactive, as 
illustrated in [link]. Some ion channels need to be activated in order to open 
and allow ions to pass into or out of the cell. These ion channels are 
sensitive to the environment and can change their shape accordingly. Ion 
channels that change their structure in response to voltage changes are 


called voltage-gated ion channels. Voltage-gated ion channels regulate the 
relative concentrations of different ions inside and outside the cell. The 
difference in total charge between the inside and outside of the cell is called 
the membrane potential. 


Voltage-gated Na* Channels 


SOCOCK 


ee 


Cytoplasm 
Closed At the resting potential, the Open In response to a nerve impulse, Inactivated For a brief period following 
channel is closed. the gate opens and Na* enters the cell. activation, the channel does not open 


in response to a new signal. 


Voltage-gated ion channels open in response to changes in 
membrane voltage. After activation, they become inactivated 
for a brief period and will no longer open in response to a 
signal. 


Resting Membrane Potential 


A neuron at rest is negatively charged: the inside of a cell is approximately 
70 millivolts more negative than the outside (—70 mV, note that this number 
varies by neuron type and by species). This voltage is called the resting 
membrane potential; it is caused by differences in the concentrations of ions 
inside and outside the cell. If the membrane were equally permeable to all 
ions, each type of ion would flow across the membrane and the system 
would reach equilibrium. Because ions cannot simply cross the membrane 
at will, there are different concentrations of several ions inside and outside 
the cell, as shown in [link]. The difference in the number of positively 


charged potassium ions (K*) inside and outside the cell dominates the 
resting membrane potential ([link]). When the membrane is at rest, K* ions 
accumulate inside the cell due to a net movement with the concentration 
gradient. The negative resting membrane potential is created and 
maintained by increasing the concentration of cations outside the cell (in the 
extracellular fluid) relative to inside the cell (in the cytoplasm). The 
negative charge within the cell is created by the cell membrane being more 
permeable to potassium ion movement than sodium ion movement. In 
neurons, potassium ions are maintained at high concentrations within the 
cell while sodium ions are maintained at high concentrations outside of the 
cell. The cell possesses potassium and sodium leakage channels that allow 
the two cations to diffuse down their concentration gradient. However, the 
neurons have far more potassium leakage channels than sodium leakage 
channels. Therefore, potassium diffuses out of the cell at a much faster rate 
than sodium leaks in. Because more cations are leaving the cell than are 
entering, this causes the interior of the cell to be negatively charged relative 
to the outside of the cell. The actions of the sodium potassium pump help to 
maintain the resting potential, once established. Recall that sodium 
potassium pumps brings two K” ions into the cell while removing three Na* 
ions per ATP consumed. As more cations are expelled from the cell than 
taken in, the inside of the cell remains negatively charged relative to the 
extracellular fluid. It should be noted that calcium ions (Ca*~) tend to 
accumulate outside of the cell because they are repelled by negatively- 
charged proteins within the cytoplasm. 


Ion Concentration Inside and Outside Neurons 


Extracellular Intracellular 
concentration concentration Ratio 
Ion (mM) (mM) outside/inside 


Na* 145 12 12 


Ion Concentration Inside and Outside Neurons 


Extracellular Intracellular 
concentration concentration Ratio 
Ion (mM) (mM) outside/inside 
K+ 4 155 0.026 
Cle 120 4 30 
Organic 
anions — 100 
(A-) 


The resting membrane potential is a result of different concentrations inside 
and outside the cell. 


(a) Resting potential 


* 8eeeeeees 


© a | 
©) Na* /K* transporter (x) (ie) «) © 


At the resting potential, all voltage-gated Na* channels and most voltage-gated K* channels are closed. The Na*/K* transporter 
pumps K* ions into the cell and Na* ions out. 


(b) Depolarization 


Nat /K* transporter 


In response to a depolarization, some Na* channels open, allowing Na* ions to enter the cell. The membrane starts to depolarize 
(the charge across the membrane lessens). If the threshold of excitation is reached, all the Na* channels open. 


(c) Hyperpolarization 


Na* channel 


800808008 


() («) Nat /K* transporter 


At the peak action potential, Na* channels close while K* channels open. K* leaves the cell, and the membrane eventually 
becomes hyperpolarized. 


The (a) resting membrane potential is a result of different 
concentrations of Na* and K” ions inside and outside the cell. A nerve 
impulse causes Na’ to enter the cell, resulting in (b) depolarization. At 


the peak action potential, K* channels open and the cell becomes (c) 
hyperpolarized. 


Action Potential 


A neuron can receive input from other neurons and, if this input is strong 
enough, send the signal to downstream neurons. Transmission of a signal 
between neurons is generally carried by a chemical called a 
neurotransmitter. Transmission of a signal within a neuron (from dendrite to 
axon terminal) is carried by a brief reversal of the resting membrane 
potential called an action potential. When neurotransmitter molecules bind 
to receptors located on a neuron’s dendrites, ion channels open. At 
excitatory synapses, this opening allows positive ions to enter the neuron 
and results in depolarization of the membrane—a decrease in the 
difference in voltage between the inside and outside of the neuron. A 
stimulus from a sensory cell or another neuron depolarizes the target neuron 
to its threshold potential (-55 mV). Na™ channels in the axon hillock open, 
allowing positive ions to enter the cell ({link] and [link]). Once the sodium 
channels open, the neuron completely depolarizes to a membrane potential 
of about +40 mV. Action potentials are considered an "all-or nothing" 
event, in that, once the threshold potential is reached, the neuron always 
completely depolarizes. Once depolarization is complete, the cell must now 
"reset" its membrane voltage back to the resting potential. To accomplish 
this, the Na* channels close and cannot be opened. This begins the neuron's 
refractory period, in which it cannot produce another action potential 
because its sodium channels will not open. At the same time, voltage-gated 
K* channels open, allowing K”* to leave the cell. As K* ions leave the cell, 
the membrane potential once again becomes negative. The diffusion of K* 
out of the cell actually hyperpolarizes the cell, in that the membrane 
potential becomes more negative than the cell's normal resting potential. At 
this point, the sodium channels will return to their resting state, meaning 
they are ready to open again if the membrane potential again exceeds the 
threshold potential. Eventually the extra K” ions diffuse out of the cell 
through the potassium leakage channels, bringing the cell from its 
hyperpolarized state, back to its resting membrane potential. The sodium- 


potassium pumps function to restore the original ion concentrations 
associated with the maintenance of the resting membrane potential. 


Note: 
Art Connection 
Peak action potential 


+30 


Repolarization 


Threshold of 
excitation 


Hyperpolarization 


Membrane potential (mV) 


Time 


The formation of an action 
potential can be divided into 
five steps: (1) A stimulus from a 
sensory cell or another neuron 
causes the target cell to 
depolarize toward the threshold 
potential. (2) If the threshold of 
excitation is reached, all Na* 
channels open and the 
membrane depolarizes. (3) At 
the peak action potential, K* 
channels open and K* begins to 
leave the cell. At the same time, 
Na* channels close. (4) The 
membrane becomes 
hyperpolarized as K* ions 
continue to leave the cell. The 
hyperpolarized membrane is in 
a refractory period and cannot 


fire. (5) The K* channels close 
and the Na‘/K”™ transporter 
restores the resting potential. 


SE 


Direction of travel of action potential 


a. In response to a signal, the 
soma end of the axon becomes 
depolarized. 


b. The depolarization spreads down 
the axon. Meanwhile, the first part of 
the membrane repolarizes. Because 
Na* channels are inactivated and 
additional K* channels have opened, 
the membrane cannot depolarize again. 


c. The action potential continues to 
travel down the axon. 


The action potential is conducted down the axon as the axon 
membrane depolarizes, then repolarizes. 


Myelin and the Propagation of the Action Potential 


For an action potential to communicate information to another neuron, it 
must travel along the axon and reach the axon terminals where it can initiate 


neurotransmitter release. The speed of conduction of an action potential 
along an axon is influenced by both the diameter of the axon and the axon’s 
resistance to ion leakage. Myelin acts as an insulator that prevents current 
from leaving the axon; this increases the speed of action potential 
conduction. In demyelinating diseases like multiple sclerosis, action 
potential conduction slows because ions leak from previously insulated 
axon areas. The nodes of Ranvier, illustrated in [link] are gaps in the myelin 
sheath along the axon. These unmyelinated spaces are about one 
micrometer long and contain voltage gated Na* and K* channels. Flow of 
ions through these channels, particularly the Na* channels, regenerates the 
action potential over and over again along the axon. This ‘jumping’ of the 
action potential from one node to the next is called saltatory conduction. If 
nodes of Ranvier were not present along an axon, the action potential would 
propagate very slowly since Na* and K* channels would have to 
continuously regenerate action potentials at every point along the axon 
instead of at specific points. Nodes of Ranvier also save energy for the 
neuron since the channels only need to be present at the nodes and not 
along the entire axon. 


Axon Nodes of Ranvier Myelin sheath 


Depolarized Membrane at 
membrane resting potential 


Nodes of Ranvier are gaps in 
myelin coverage along axons. 
Nodes contain voltage-gated K* 
and Na* channels. Action 
potentials travel down the axon by 
jumping from one node to the 
next. 


Synaptic Transmission 


The synapse or “gap” is the place where information is transmitted from 
one neuron to another. Synapses usually form between axon terminals and 
dendritic spines, but this is not universally true. There are also axon-to- 
axon, dendrite-to-dendrite, and axon-to-cell body synapses. The neuron 
transmitting the signal is called the presynaptic neuron, and the neuron 
receiving the signal is called the postsynaptic neuron. Note that these 
designations are relative to a particular synapse—most neurons are both 
presynaptic and postsynaptic. There are two types of synapses: chemical 
and electrical. 


Chemical Synapse 


When an action potential reaches the axon terminal it depolarizes the 
membrane and opens voltage-gated Na* channels. Na* ions enter the cell, 
further depolarizing the presynaptic membrane. This depolarization causes 
voltage-gated Ca** channels to open. Calcium ions entering the cell initiate 
a signaling cascade that causes small membrane-bound vesicles, called 
synaptic vesicles, containing neurotransmitter molecules to fuse with the 
presynaptic membrane. Synaptic vesicles are shown in [link], which is an 
image from a scanning electron microscope. 


This pseudocolored image taken 
with a scanning electron 
microscope shows an axon 
terminal that was broken open to 
reveal synaptic vesicles (blue and 
orange) inside the neuron. (credit: 
modification of work by Tina 
Carvalho, NIH-NIGMS; scale-bar 
data from Matt Russell) 


Fusion of a vesicle with the presynaptic membrane causes neurotransmitter 
to be released into the synaptic cleft, the extracellular space between the 
presynaptic and postsynaptic membranes, as illustrated in [link]. The 
neurotransmitter diffuses across the synaptic cleft and binds to receptor 
proteins on the postsynaptic membrane. 


Presynaptic 
neuron 


Action potential 
arrives at axon 
terminal. 


Axon terminal 


Ca?* entry causes 
neurotransmitter-containing 
synaptic vesicles to release 
their contents by exocytosis. 


Synaptic 
vesicles 


Synaptic cleft Voltage-gated Ca2* 
channels open and 
Ca?* enters the 


axon terminal. 


Neurotransmitter diffuses across 
the synaptic cleft and binds to 
ligand-gated ion channels on the 
postsynaptic membrane. 


Localized membrane 


5 Diffusion away 
ymatic from synaps 


Binding of neurotransmitter opens ligand-gated © Reuptake by the presynapic neuron, enzymatic degradation, 
ion channels, resulting in graded potentials. and diffusion reduce neurotransmitter levels, terminating the 
signal. 


Communication at chemical synapses requires release of 
neurotransmitters. When the presynaptic membrane is 
depolarized, voltage-gated Ca** channels open and allow Ca?* to 
enter the cell. The calcium entry causes synaptic vesicles to fuse 


with the membrane and release neurotransmitter molecules into 
the synaptic cleft. The neurotransmitter diffuses across the 
synaptic cleft and binds to ligand-gated ion channels in the 
postsynaptic membrane, resulting in a localized depolarization or 
hyperpolarization of the postsynaptic neuron. 


The binding of a specific neurotransmitter causes particular ion channels, in 
this case chemically-gated channels, on the postsynaptic membrane to open. 
Neurotransmitters can either have excitatory or inhibitory effects on the 
postsynaptic membrane, as detailed in [link]. For example, when 
acetylcholine is released at the synapse between a nerve and muscle (called 
the neuromuscular junction) by a presynaptic neuron, it causes postsynaptic 
Na* channels to open. Na’ enters the postsynaptic cell and causes the 
postsynaptic membrane to depolarize. This depolarization is called an 
excitatory postsynaptic potential (EPSP) and makes the postsynaptic 
neuron more likely to fire an action potential. Release of neurotransmitter at 
inhibitory synapses causes inhibitory postsynaptic potentials (IPSPs), a 
hyperpolarization of the presynaptic membrane. For example, when the 
neurotransmitter GABA (gamma-aminobutyric acid) is released from a 
presynaptic neuron, it binds to and opens Cl channels. Cl ions enter the 
cell and hyperpolarizes the membrane, making the neuron less likely to fire 
an action potential. 


Once neurotransmission has occurred, the neurotransmitter must be 
removed from the synaptic cleft so the postsynaptic membrane can “reset” 
and be ready to receive another signal. This can be accomplished in three 
ways: the neurotransmitter can diffuse away from the synaptic cleft, it can 
be degraded by enzymes in the synaptic cleft, or it can be recycled 
(sometimes called reuptake) by the presynaptic neuron. Several drugs act at 
this step of neurotransmission. For example, some drugs that are given to 
Alzheimer’s patients work by inhibiting acetylcholinesterase, the enzyme 
that degrades acetylcholine. This inhibition of the enzyme essentially 
increases neurotransmission at synapses that release acetylcholine. Once 
released, the acetylcholine stays in the cleft and can continually bind and 
unbind to postsynaptic receptors. 


Neurotransmitter Function and Location 


Neurotransmitter Example Location 
CNS 

Acetylcholine — and/or 
PNS 
CNS 


Dopamine, serotonin, 


Biogenic amine eee and/or 
PineP PNS 
eer | Glycine, glutamate, aspartate, CNS 
gamma aminobutyric acid 
CNS 
Neuropeptide Substance P, endorphins and/or 
PNS 


Signal Summation 


Sometimes a single EPSP is strong enough to induce an action potential in 
the postsynaptic neuron, but often multiple presynaptic inputs must create 
EPSPs around the same time for the postsynaptic neuron to be sufficiently 
depolarized to fire an action potential. This process is called summation 
and occurs at the axon hillock, as illustrated in [link]. Additionally, one 
neuron often has inputs from many presynaptic neurons—some excitatory 
and some inhibitory—so IPSPs can cancel out EPSPs and vice versa. It is 
the net change in postsynaptic membrane voltage that determines whether 
the postsynaptic cell has reached its threshold of excitation needed to fire an 
action potential. Together, synaptic summation and the threshold for 
excitation act as a filter so that random “noise” in the system is not 
transmitted as important information. 


Axon 


hillock Summation of 


membrane potentials 
at the axon hillock 


— EPSPs 
——IPSPs 


wo 
o 


Threshold of activation 


potential (mV) 


| 
= 
f=) 


Membrane 
Ar 
oO 


Time 


A single neuron can receive both 
excitatory and inhibitory inputs 
from multiple neurons, resulting in 
local membrane depolarization 
(EPSP input) and 
hyperpolarization (IPSP input). 
All these inputs are added together 
at the axon hillock. If the EPSPs 
are strong enough to overcome the 
IPSPs and reach the threshold of 
excitation, the neuron will fire. 


Section Summary 


Neurons have charged membranes because there are different 
concentrations of ions inside and outside of the cell. Voltage-gated ion 
channels control the movement of ions into and out of a neuron. When a 
neuronal membrane is depolarized to at least the threshold of excitation, an 
action potential is fired. The action potential is then propagated along an 
axon to the axon terminals. In a chemical synapse, the action potential 
causes release of neurotransmitter molecules into the synaptic cleft. 
Through binding to postsynaptic receptors, the neurotransmitter can cause 
excitatory or inhibitory postsynaptic potentials by depolarizing or 
hyperpolarizing, respectively, the postsynaptic membrane. 


Art Connections 


Exercise: 


Problem: 


[link] Potassium channel blockers, such as amiodarone and 
procainamide, which are used to treat abnormal electrical activity in 
the heart, called cardiac dysrhythmia, impede the movement of K+ 
through voltage-gated K+ channels. Which part of the action potential 
would you expect potassium channels to affect? 


Solution: 


[link] Potassium channel blockers slow the repolarization phase, but 
have no effect on depolarization. 


Review Questions 


Exercise: 


Problem: 


For a neuron to fire an action potential, its membrane must reach 


a. hyperpolarization 

b. the threshold of excitation 

c. the refractory period 

d. inhibitory postsynaptic potential 


Solution: 


B 


Exercise: 


Problem: 


After an action potential, the opening of additional voltage-gated 
channels and the inactivation of sodium channels, cause the 
membrane to return to its resting membrane potential. 


a. sodium 

b. potassium 
c. calcium 
d. chloride 


Solution: 


B 


Free Response 


Exercise: 
Problem: 


How does myelin aid propagation of an action potential along an 
axon? How do the nodes of Ranvier help this process? 


Solution: 


Myelin prevents the leak of current from the axon. Nodes of Ranvier 
allow the action potential to be regenerated at specific points along the 
axon. They also save energy for the cell since voltage-gated ion 
channels and sodium-potassium transporters are not needed along 
myelinated portions of the axon. 


Exercise: 


Problem: What are the main steps in chemical neurotransmission? 


Solution: 


An action potential travels along an axon until it depolarizes the 
membrane at an axon terminal. Depolarization of the membrane causes 
voltage-gated Ca** channels to open and Ca?* to enter the cell. The 
intracellular calcium influx causes synaptic vesicles containing 
neurotransmitter to fuse with the presynaptic membrane. The 
neurotransmitter diffuses across the synaptic cleft and binds to 
receptors on the postsynaptic membrane. Depending on the specific 
neurotransmitter and postsynaptic receptor, this action can cause 
positive (excitatory postsynaptic potential) or negative (inhibitory 
postsynaptic potential) ions to enter the cell. 


Glossary 


action potential 
self-propagating momentary change in the electrical potential of a 
neuron (or muscle) membrane 


depolarization 
change in the membrane potential to a less negative value 


excitatory postsynaptic potential (EPSP) 
depolarization of a postsynaptic membrane caused by neurotransmitter 
molecules released from a presynaptic cell 


hyperpolarization 
change in the membrane potential to a more negative value 


inhibitory postsynaptic potential (IPSP) 
hyperpolarization of a postsynaptic membrane caused by 
neurotransmitter molecules released from a presynaptic cell 


membrane potential 
difference in electrical potential between the inside and outside of a 
cell 


refractory period 
period after an action potential when it is more difficult or impossible 
for an action potential to be fired; caused by inactivation of sodium 
channels and activation of additional potassium channels of the 
membrane 


saltatory conduction 
“jumping” of an action potential along an axon from one node of 
Ranvier to the next 


summation 
process of multiple presynaptic inputs creating EPSPs around the same 
time for the postsynaptic neuron to be sufficiently depolarized to fire 
an action potential 


synaptic cleft 
space between the presynaptic and postsynaptic membranes 


synaptic vesicle 
spherical structure that contains a neurotransmitter 


threshold of excitation 
level of depolarization needed for an action potential to fire 


The Central and Peripheral Nervous Systems 
By the end of this section, you will be able to: 


¢ Describe the basic parts and functions of the central nervous system 
e Describe the basic parts and functions of the peripheral nervous system 


The Central Nervous System 


The central nervous system (CNS) is made up of the brain and spinal cord and is covered with three layers of 
protective coverings called meninges (“meninges” is derived from the Greek and means “membranes”) ([link]). 
The outermost layer is the dura mater, the middle layer is the web-like arachnoid mater, and the inner layer is the 
pia mater, which directly contacts and covers the brain and spinal cord. The space between the arachnoid and pia 
maters is filled with cerebrospinal fluid (CSF). The brain floats in CSF, which acts as a cushion and shock 
absorber. 


Dura mater Arachnoid 


mater 


Pia mater Cerebral 


cortex 


The cerebral cortex is covered by three 
layers of meninges: the dura, 
arachnoid, and pia maters. (credit: 
modification of work by Gray's 
Anatomy) 


The Brain 


The brain is the part of the central nervous system that is contained in the cranial cavity of the skull. It includes the 
cerebral cortex, limbic system, basal ganglia, thalamus, hypothalamus, cerebellum, brainstem, and retinas. The 
outermost part of the brain is a thick piece of nervous system tissue called the cerebral cortex. The cerebral 
cortex, limbic system, and basal ganglia make up the two cerebral hemispheres. A thick fiber bundle called the 
corpus callosum (corpus = “body”; callosum = “tough”) connects the two hemispheres. Although there are some 
brain functions that are localized more to one hemisphere than the other, the functions of the two hemispheres are 
largely redundant. In fact, sometimes (very rarely) an entire hemisphere is removed to treat severe epilepsy. While 
patients do suffer some deficits following the surgery, they can have surprisingly few problems, especially when 
the surgery is performed on children who have very immature nervous systems. 


In other surgeries to treat severe epilepsy, the corpus callosum is cut instead of removing an entire hemisphere. 
This causes a condition called split-brain, which gives insights into unique functions of the two hemispheres. For 
example, when an object is presented to patients’ left visual field, they may be unable to verbally name the object 
(and may claim to not have seen an object at all). This is because the visual input from the left visual field crosses 
and enters the right hemisphere and cannot then signal to the speech center, which generally is found in the left 


side of the brain. Remarkably, if a split-brain patient is asked to pick up a specific object out of a group of objects 
with the left hand, the patient will be able to do so but will still be unable to verbally identify it. 


Each hemisphere contains regions called lobes that are involved in different functions. Each hemisphere of the 
mammalian cerebral cortex can be broken down into four functionally and spatially defined lobes: frontal, parietal, 
temporal, and occipital ((link]). 


Motor cortex 


Somatosensory 
cortex 

Frontal lobe 
Parietal lobe 


Olfactory bulb 


Temporal lobe ‘\ 
Brainstem 


The human cerebral cortex includes the 
frontal, parietal, temporal, and occipital 
lobes. 


Cerebellum 


Spinal cord 


| 
\ 


\ 


The frontal lobe is located at the front of the brain, over the eyes. This lobe contains the olfactory bulb, which 
processes smells. The frontal lobe also contains the motor cortex, which is important for planning and 
implementing movement. Areas within the motor cortex map to different muscle groups. Neurons in the frontal 
lobe also control cognitive functions like maintaining attention, speech, and decision-making. Studies of humans 
who have damaged their frontal lobes show that parts of this area are involved in personality, socialization, and 
assessing risk. The parietal lobe is located at the top of the brain. Neurons in the parietal lobe are involved in 
speech and also reading. Two of the parietal lobe’s main functions are processing somatosensation—touch 
sensations like pressure, pain, heat, cold—and processing proprioception—the sense of how parts of the body are 
oriented in space. The parietal lobe contains a somatosensory map of the body similar to the motor cortex. The 
occipital lobe is located at the back of the brain. It is primarily involved in vision—seeing, recognizing, and 
identifying the visual world. The temporal lobe is located at the base of the brain and is primarily involved in 
processing and interpreting sounds. It also contains the hippocampus (named from the Greek for “seahorse,” 
which it resembles in shape) a structure that processes memory formation. The role of the hippocampus in memory 
was partially determined by studying one famous epileptic patient, HM, who had both sides of his hippocampus 
removed in an attempt to cure his epilepsy. His seizures went away, but he could no longer form new memories 
(although he could remember some facts from before his surgery and could learn new motor tasks). 


Interconnected brain areas called the basal ganglia play important roles in movement control and posture. The 
basal ganglia also regulate motivation. 


The thalamus acts as a gateway to and from the cortex. Sensory and motor impulses go through it from the brain 
to the effectors in the peripheral nervous system. It also receives feedback from the cortex. This feedback 
mechanism can modulate conscious awareness of sensory and motor inputs depending on the attention and arousal 
state of the animal. The thalamus helps regulate consciousness, arousal, and sleep states. 


Below the thalamus is the hypothalamus. The hypothalamus controls the endocrine system by sending signals to 
the pituitary gland. Among other functions, the hypothalamus is the body’s thermostat—it makes sure the body 
temperature is kept at appropriate levels. Neurons within the hypothalamus also regulate circadian rhythms, 
sometimes called sleep cycles. 


The limbic system is a connected set of structures that regulates emotion, as well as behaviors related to fear and 
motivation. It plays a role in memory formation and includes parts of the thalamus and hypothalamus as well as 
the hippocampus. One important structure within the limbic system is a temporal lobe structure called the 
amygdala. The two amygdala (one on each side) are important both for the sensation of fear and for recognizing 
fearful faces. 


The cerebellum (cerebellum = “little brain”) sits at the base of the brain on top of the brainstem. The cerebellum 
controls balance and aids in coordinating movement and learning new motor tasks. The cerebellum of birds is large 
compared to other vertebrates because of the coordination required by flight. 


The brainstem connects the rest of the brain with the spinal cord and regulates some of the most important and 
basic functions of the nervous system including breathing, swallowing, digestion, sleeping, walking, and sensory 
and motor information integration. 


Spinal cord 


Connecting to the brainstem and extending down the body through the spinal column is the spinal cord. The spinal 
cord is a thick bundle of nerve tissue that carries information about the body to the brain and from the brain to the 
body. The spinal cord is contained within the meninges and the bones of the vertebral column but is able to 
communicate signals to and from the body through its connections with spinal nerves (part of the peripheral 
nervous system). A cross-section of the spinal cord looks like a white oval containing a gray butterfly-shape 
([link]). Myelinated axons make up the “white matter” and neuron and glia cell bodies (and interneurons) make up 
the “gray matter.” Axons and cell bodies in the dorsal spinal cord convey mostly sensory information from the 
body to the brain. Axons and cell bodies in the ventral spinal cord primarily transmit signals controlling movement 
from the brain to the body. 


The spinal cord also controls motor reflexes. These reflexes are quick, unconscious movements—like 
automatically removing a hand from a hot object. Reflexes are so fast because they involve local synaptic 
connections. For example, the knee reflex that a doctor tests during a routine physical is controlled by a single 
synapse between a sensory neuron and a motor neuron. While a reflex may only require the involvement of one or 
two synapses, synapses with interneurons in the spinal column transmit information to the brain to convey what 
happened (the knee jerked, or the hand was hot). 


White matter Gray matter 


Dorsal horn 


Ventral horn 


A cross-section of the spinal cord 

shows gray matter (containing cell 

bodies and interneurons) and white 
matter (containing myelinated axons). 


The Peripheral Nervous System 


The peripheral nervous system (PNS) is the connection between the central nervous system and the rest of the 
body. The PNS can be broken down into the autonomic nervous system, which controls bodily functions without 


conscious control, and the sensory-somatic nervous system, which transmits sensory information from the skin, 
muscles, and sensory organs to the CNS and sends motor commands from the CNS to the muscles. 


Autonomic Nervous System 


Parasympathetic Sympathetic 


Preganglionic 
neuron: soma is 
usually in the spine 


Preganglionic 
neuron: soma is 
usually in the brain- 
stem or sacral 
(toward the bottom) 
spinal cord 


Neurotransmitter 
released from the 
preganglionic 
synapse: 
acetylcholine 


Postganglionic 
neuron: soma is 
usually ina 


Postganglionic 
neuron: soma is in 


ganglion near the a sympathetic 
target organ ganglion, located 
next to the 
spinal cord 
pare Neurotransmitter 
released from 


postganglionic 
synapse: 
acetylcholine or nitric 


oxide 
Target organ Target organ 


postganglionic 
synapse: 
norepinephrine 


“Rest and digest” “Fight or flight” 
response is activated response is activated 


In the autonomic nervous system, a preganglionic neuron (originating in the thoraco-lumbar region of the spinal 

to a neuron in a ganglion that, in turn, synapses on a target organ. Activation of the sympathetic nervous system c 

norepinephrine on the target organ. Activation of the parasympathetic nervous system causes release of acetylc 
target organ. 


The autonomic nervous system serves as the relay between the CNS and the internal organs. It controls the lungs, 
the heart, smooth muscle, and exocrine and endocrine glands and vicera of the abdominal cavity. The autonomic 
nervous system controls these organs largely without conscious control; it can continuously monitor the conditions 
of these different systems and implement changes as needed. Signaling to the target tissue usually involves two 
synapses: a preganglionic neuron (originating in the CNS) synapses to a neuron in a ganglion that, in turn, 
synapses on the target organ ((link]). There are two divisions of the autonomic nervous system that often have 
opposing effects: the sympathetic nervous system and the parasympathetic nervous system. 


The sympathetic nervous system is responsible for the immediate responses an animal makes when it encounters 
a dangerous situation. One way to remember this is to think of the “fight-or-flight” response a person feels when 
encountering a snake (“snake” and “sympathetic” both begin with “s”). Examples of functions controlled by the 
sympathetic nervous system include an accelerated heart rate and inhibited digestion. These functions help prepare 
an organism’s body for the physical strain required to escape a potentially dangerous situation or to fend off a 
predator. 


Parasympathetic Nervous System Sympathetic Nervous System 


Constricts pupil J ( Dilates pupil 
Stimulates salivation Inhibits salivation 
Slows heart rate Increases heart rate 


Dilates bronchi 


Constricts bronchi 


Solar plexus Inhibits digestion 


Stimulates digestion 
Stimulates the breakdown 
of glycogen 

Stimulates bile secretion 


Stimulates secretion of 
adrenaline and noradrenaline 


Causes bladder to contract : 
Inhibits contraction of bladder 


The sympathetic and parasympathetic nervous systems 
often have opposing effects on target organs. 


While the sympathetic nervous system is activated in stressful situations, the parasympathetic nervous system 
allows an animal to “rest and digest.” One way to remember this is to think that during a restful situation like a 
picnic, the parasympathetic nervous system is in control (“picnic” and “parasympathetic” both start with “p”). 
Parasympathetic preganglionic neurons have cell bodies located in the brainstem and in the sacral (toward the 
bottom) spinal cord ({link]). The parasympathetic nervous system resets organ function after the sympathetic 
nervous system is activated including slowing of heart rate, lowered blood pressure, and stimulation of digestion. 


The sensory-somatic nervous system is made up of cranial and spinal nerves and contains both sensory and motor 
neurons. Sensory neurons transmit sensory information from the skin, skeletal muscle, and sensory organs to the 
CNS. Motor neurons transmit messages about desired movement from the CNS to the muscles to make them 
contract. Without its sensory-somatic nervous system, an animal would be unable to process any information about 
its environment (what it sees, feels, hears, and so on) and could not control motor movements. Unlike the 
autonomic nervous system, which usually has two synapses between the CNS and the target organ, sensory and 
motor neurons usually have only one synapse—one ending of the neuron is at the organ and the other directly 
contacts a CNS neuron. 


Section Summary 


The vertebrate central nervous system contains the brain and the spinal cord, which are covered and protected by 
three meninges. The brain contains structurally and functionally defined regions. In mammals, these include the 
cortex (which can be broken down into four primary functional lobes: frontal, temporal, occipital, and parietal), 
basal ganglia, thalamus, hypothalamus, limbic system, cerebellum, and brainstem—although structures in some of 
these designations overlap. While functions may be primarily localized to one structure in the brain, most complex 
functions, like language and sleep, involve neurons in multiple brain regions. The spinal cord is the information 
superhighway that connects the brain with the rest of the body through its connections with peripheral nerves. It 
transmits sensory input and motor output and also controls motor reflexes. 


The peripheral nervous system contains both the autonomic and sensory-somatic nervous systems. The autonomic 
nervous system provides unconscious control over visceral functions and has two divisions: the sympathetic and 


parasympathetic nervous systems. The sympathetic nervous system is activated in stressful situations to prepare 
the animal for a “fight-or-flight” response. The parasympathetic nervous system is active during restful periods. 
The sensory-somatic nervous system is made of cranial and spinal nerves that transmit sensory information from 
skin and muscle to the CNS and motor commands from the CNS to the muscles. 


Review Questions 


Exercise: 


Problem: The part of the brain that is responsible for coordination during movement is the 


a. limbic system 
b. thalamus 

c. cerebellum 

d. parietal lobe 


Solution: 
Cc 
Exercise: 
Problem: Which part of the nervous system directly controls the digestive system? 


a. parasympathetic nervous system 
b. central nervous system 

c. spinal cord 

d. sensory-somatic nervous system 


Solution: 


A 


Free Response 


Exercise: 


Problem: What are the main functions of the spinal cord? 


Solution: 


The spinal cord transmits sensory information from the body to the brain and motor commands from the brain 
to the body through its connections with peripheral nerves. It also controls motor reflexes. 

Exercise: 
Problem: 


What are the main differences between the sympathetic and parasympathetic branches of the autonomic 
nervous system? 


Solution: 


The sympathetic nervous system prepares the body for “fight or flight,” whereas the parasympathetic nervous 
system allows the body to “rest and digest.” Sympathetic neurons release norepinephrine onto target organs; 


parasympathetic neurons release acetylcholine. Sympathetic neuron cell bodies are located in sympathetic 
ganglia. Parasympathetic neuron cell bodies are located in the brainstem and sacral spinal cord. Activation of 
the sympathetic nervous system increases heart rate and blood pressure and decreases digestion and blood 
flow to the skin. Activation of the parasympathetic nervous system decreases heart rate and blood pressure 
and increases digestion and blood flow to the skin. 


Exercise: 


Problem: What are the main functions of the sensory-somatic nervous system? 


Solution: 


The sensory-somatic nervous system transmits sensory information from the skin, muscles, and sensory 
organs to the CNS. It also sends motor commands from the CNS to the muscles, causing them to contract. 


Glossary 


action potential 
a momentary change in the electrical potential of a neuron (or muscle) membrane 


amygdala 
a structure within the limbic system that processes fear 


autonomic nervous system 
the part of the peripheral nervous system that controls bodily functions 


axon 
a tube-like structure that propagates a signal from a neuron’s cell body to axon terminals 


basal ganglia 
an interconnected collections of cells in the brain that are involved in movement and motivation 


brainstem 
a portion of brain that connects with the spinal cord; controls basic nervous system functions like breathing 
and swallowing 


central nervous system (CNS) 
the nervous system made up of the brain and spinal cord; covered with three layers of protective meninges 


cerebellum 
the brain structure involved in posture, motor coordination, and learning new motor actions 


cerebral cortex 
the outermost sheet of brain tissue; involved in many higher-order functions 


cerebrospinal fluid (CSF) 
a clear liquid that surrounds the brain and fills its ventricles and acts as a shock absorber 


corpus callosum 
a thick nerve bundle that connects the cerebral hemispheres 


dendrite 
a structure that extends away from the cell body to receive messages from other neurons 


depolarization 
a change in the membrane potential to a less negative value 


frontal lobe 
the part of the cerebral cortex that contains the motor cortex and areas involved in planning, attention, and 
language 


glia 
(also, glial cells) the cells that provide support functions for neurons 


hippocampus 
the brain structure in the temporal lobe involved in processing memories 


hypothalamus 
the brain structure that controls hormone release and body homeostasis 


limbic system 
a connected brain area that processes emotion and motivation 


membrane potential 
a difference in electrical potential between the inside and outside of a cell 


meninges 
(singular: meninx) the membranes that cover and protect the central nervous system 


myelin sheath 
a cellular extension containing a fatty substance produced by glia that surrounds and insulates axons 


neuron 
a specialized cell that can receive and transmit electrical and chemical signals 


occipital lobe 
the part of the cerebral cortex that contains visual cortex and processes visual stimuli 


parasympathetic nervous system 
the division of autonomic nervous system that regulates visceral functions during relaxation 


parietal lobe 
the part of the cerebral cortex involved in processing touch and the sense of the body in space 


peripheral nervous system (PNS) 
the nervous system that serves as the connection between the central nervous system and the rest of the body; 
consists of the autonomic nervous system and the sensory-somatic nervous system 


sensory-somatic nervous system 
the system of sensory and motor nerves 


spinal cord 
a thick fiber bundle that connects the brain with peripheral nerves; transmits sensory and motor information; 
contains neurons that control motor reflexes 


sympathetic nervous system 
the division of autonomic nervous system activated during stressful "fight-or-flight” situations 


synapse 
a junction between two neurons where neuronal signals are communicated 


synaptic cleft 
a space between the presynaptic and postsynaptic membranes 


temporal lobe 


the part of the cerebral cortex that processes auditory input; parts of the temporal lobe are involved in speech, 
memory, and emotion processing 


thalamus 
the brain area that relays sensory information to the cortex 


threshold of excitation 
the level of depolarization needed for an action potential to fire 


Introduction to the Special Senses 
class="introduction" 


This shark 
uses its 
senses of 
sight and 
smell to 
hunt, but it 
also relies 
on its ability 
to sense the 
electric 
fields of 
prey, a sense 
not present 
in most land 
animals. 
(credit: 
modificatio 
n of work 
by 
Hermanus 
Backpacker 
s Hostel, 
South 
Africa) 


In more advanced animals, the senses are constantly at work, making the 
animal aware of stimuli—such as light, or sound, or the presence of a 
chemical substance in the external environment—and monitoring 
information about the organism’s internal environment. All bilaterally 
symmetric animals have a sensory system, and the development of any 
species’ sensory system has been driven by natural selection; thus, sensory 
systems differ among species according to the demands of their 
environments. The shark, unlike most fish predators, is electrosensitive— 
that is, sensitive to electrical fields produced by other animals in its 
environment. While it is helpful to this underwater predator, 
electrosensitivity is a sense not found in most land animals. in this chapter, 
information about smell, taste, hearing, and vision is presented. 


Taste and Smell 
By the end of this section, you will be able to: 


e Explain in what way smell and taste stimuli differ from other sensory 
stimuli 

e Identify the five primary tastes that can be distinguished by humans 

e Explain in anatomical terms why a dog’s sense of smell is more acute 
than a human’s 


Taste, also called gustation, and smell, also called olfaction, are the most 
interconnected senses in that both involve molecules of the stimulus 
entering the body and bonding to receptors. Smell lets an animal sense the 
presence of food other chemicals in the environment that can impact their 
survival. Similarly, the sense of taste allows animals to discriminate 
between types of foods. While the value of a sense of smell is obvious, 
what is the value of a sense of taste? Different tasting foods have different 
attributes, both helpful and harmful. For example, sweet-tasting substances 
tend to be highly caloric, which could be necessary for survival in lean 
times. Bitterness is associated with toxicity, and sourness is associated with 
spoiled food. Salty foods are valuable in maintaining homeostasis by 
helping the body retain water and by providing ions necessary for cells to 
function. 


Tastes and Odors 


Both taste and odor stimuli are molecules taken in from the environment. 
The primary tastes detected by humans are sweet, sour, bitter, salty and 
umami. The first four tastes need little explanation. The identification of 
umami as a fundamental taste occurred fairly recently— it was identified in 
1908 by Japanese scientist Kikunae Ikeda while he worked with seaweed 
broth, but it was not widely accepted as a taste that could be physiologically 
distinguished until many years later. The taste of umami, also known as 
savoriness, is attributable to the taste of the amino acid L-glutamate. In fact, 
monosodium glutamate, or MSG, is often used in cooking to enhance the 
savory taste of certain foods. What is the adaptive value of being able to 
distinguish umami? Savory substances tend to be high in protein. 


All odors that we perceive are molecules in the air we breathe. If a 
substance does not release molecules into the air from its surface, it has no 
smell. And if a human or other animal does not have a receptor that 
recognizes a specific molecule, then that molecule has no smell. Humans 
have about 350 olfactory receptor subtypes that work in various 
combinations to allow us to sense about 10,000 different odors. Compare 
that to mice, for example, which have about 1,300 olfactory receptor types, 
and therefore probably sense more odors. Both odors and tastes involve 
molecules that stimulate specific chemoreceptors. Although humans 
commonly distinguish taste as one sense and smell as another, they work 
together to create the perception of flavor. A person’s perception of flavor is 
reduced if he or she has congested nasal passages. 


Reception and Transduction 


Odorants (odor molecules) enter the nose and dissolve in the olfactory 
epithelium, the mucosa at the back of the nasal cavity (as illustrated in 
[link]). The olfactory epithelium is a collection of specialized olfactory 
receptors in the back of the nasal cavity that spans an area about 5 cm? in 
humans. Recall that sensory cells are neurons. An olfactory receptor, 
which is a dendrite of a specialized neuron, responds when it binds certain 
molecules inhaled from the environment by sending impulses directly to the 
olfactory bulb of the brain. Humans have about 12 million olfactory 
receptors, distributed among hundreds of different receptor types that 
respond to different odors. Twelve million seems like a large number of 
receptors, but compare that to other animals: rabbits have about 100 
million, most dogs have about 1 billion, and bloodhounds—dogs selectively 
bred for their sense of smell—have about 4 billion. The overall size of the 
olfactory epithelium also differs between species, with that of bloodhounds, 
for example, being many times larger than that of humans. 


Olfactory neurons are bipolar neurons (neurons with two processes from 
the cell body). Each neuron has a single dendrite buried in the olfactory 
epithelium, and extending from this dendrite are 5 to 20 receptor-laden, 
hair-like cilia that trap odorant molecules. The sensory receptors on the cilia 
are proteins, and it is the variations in their amino acid chains that make the 
receptors sensitive to different odorants. Each olfactory sensory neuron has 


only one type of receptor on its cilia, and the receptors are specialized to 
detect specific odorants, so the bipolar neurons themselves are specialized. 
When an odorant binds with a receptor that recognizes it, the sensory 
neuron associated with the receptor is stimulated. Olfactory stimulation is 
the only sensory information that directly reaches the cerebral cortex, 
whereas other sensations are relayed through the thalamus. 


Olfactory 
bulb 


Olfactory 
epithelium 


Nerve 
endings 


Nasal 
cavity 


Bipolar neuron 


(a) (b) 


In the human olfactory system, (a) bipolar 
olfactory neurons extend from (b) the olfactory 
epithelium, where olfactory receptors are 
located, to the olfactory bulb. (credit: 
modification of work by Patrick J. Lynch, 
medical illustrator; C. Carl Jaffe, MD, 
cardiologist) 


Note: 
Evolution Connection 
Pheromones 


A pheromone is a chemical released by an animal that affects the behavior 
or physiology of animals of the same species. Pheromonal signals can have 
profound effects on animals that inhale them, but pheromones apparently 
are not consciously perceived in the same way as other odors. There are 
several different types of pheromones, which are released in urine or as 
glandular secretions. Certain pheromones are attractants to potential mates, 
others are repellants to potential competitors of the same sex, and still 
others play roles in mother-infant attachment. Some pheromones can also 
influence the timing of puberty, modify reproductive cycles, and even 
prevent embryonic implantation. While the roles of pheromones in many 
nonhuman species are important, pheromones have become less important 
in human behavior over evolutionary time compared to their importance to 
organisms with more limited behavioral repertoires. 

The vomeronasal organ (VNO, or Jacobson’s organ) is a tubular, fluid- 
filled, olfactory organ present in many vertebrate animals that sits adjacent 
to the nasal cavity. It is very sensitive to pheromones and is connected to 
the nasal cavity by a duct. When molecules dissolve in the mucosa of the 
nasal cavity, they then enter the VNO where the pheromone molecules 
among them bind with specialized pheromone receptors. Upon exposure to 
pheromones from their own species or others, many animals, including 
cats, may display the flehmen response (shown in [link]), a curling of the 
upper lip that helps pheromone molecules enter the VNO. 

Pheromonal signals are sent, not to the main olfactory bulb, but to a 
different neural structure that projects directly to the amygdala (recall that 
the amygdala is a brain center important in emotional reactions, such as 
fear). The pheromonal signal then continues to areas of the hypothalamus 
that are key to reproductive physiology and behavior. While some 
scientists assert that the VNO is apparently functionally vestigial in 
humans, even though there is a similar structure located near human nasal 
cavities, others are researching it as a possible functional system that may, 
for example, contribute to synchronization of menstrual cycles in women 
living in close proximity. 


The flehmen response in this tiger 
results in the curling of the upper 
lip and helps airborne pheromone 
molecules enter the vomeronasal 
organ. (credit: modification of 
work by "chadh"/Flickr) 


Taste 


Detecting a taste (gustation) is fairly similar to detecting an odor 
(olfaction), given that both taste and smell rely on chemical receptors being 
stimulated by certain molecules. The primary organ of taste is the taste bud. 
A taste bud is a cluster of gustatory receptors (taste cells) that are located 
within the bumps on the tongue called papillae (singular: papilla) 
(illustrated in [link]). There are several structurally distinct papillae. 
Filiform papillae, which are located across the tongue, are tactile, providing 
friction that helps the tongue move substances, and contain no taste cells. In 
contrast, fungiform papillae, which are located mainly on the anterior two- 
thirds of the tongue, each contain one to eight taste buds and also have 
receptors for pressure and temperature. The large circumvallate papillae 
contain up to 100 taste buds and form a V near the posterior margin of the 
tongue. 


a 


Circumvallate papillae 
Foliate 


papillae Fungiform papillae 


Filiform papillae 


(a) Foliate, circumvallate, and fungiform papillae are 
located on different regions of the tongue. (b) Foliate 
papillae are prominent protrusions on this light micrograph. 
(credit a: modification of work by NCI; scale-bar data from 
Matt Russell) 


In addition to those two types of chemically and mechanically sensitive 
papillae are foliate papillae—tleaf-like papillae located in parallel folds 
along the edges and toward the back of the tongue, as seen in the [link] 
micrograph. Foliate papillae contain about 1,300 taste buds within their 
folds. Finally, there are circumvallate papillae, which are wall-like papillae 
in the shape of an inverted “V” at the back of the tongue. Each of these 
papillae is surrounded by a groove and contains about 250 taste buds. 


Each taste bud’s taste cells are replaced every 10 to 14 days. These are 
elongated cells with hair-like processes called microvilli at the tips that 
extend into the taste bud pore (illustrate in [link]). Food molecules 
(tastants) are dissolved in saliva, and they bind with and stimulate the 
receptors on the microvilli. The receptors for tastants are located across the 
outer portion and front of the tongue, outside of the middle area where the 
filiform papillae are most prominent. 


Oral Cavity Microvilli Taste pore 


La) 
©» Epidermis of tongue 


Taste cell 


Pores in the tongue allow tastants to enter taste 
pores in the tongue. (credit: modification of 
work by Vincenzo Rizzo) 


In humans, there are five primary tastes, and each taste has only one 
corresponding type of receptor. Thus, like olfaction, each receptor is 
specific to its stimulus (tastant). Transduction of the five tastes happens 
through different mechanisms that reflect the molecular composition of the 
tastant. A salty tastant (containing NaCl) provides the sodium ions (Na‘) 
that enter the taste neurons and excite them directly. Sour tastants are acids 
and belong to the thermoreceptor protein family. Binding of an acid or other 
sour-tasting molecule triggers a change in the ion channel and these 
increase hydrogen ion (H*) concentrations in the taste neurons, thus 
depolarizing them. Sweet, bitter, and umami tastants require a G-protein 
coupled receptor. These tastants bind to their respective receptors, thereby 
exciting the specialized neurons associated with them. 


Both tasting abilities and sense of smell change with age. In humans, the 
senses decline dramatically by age 50 and continue to decline. A child may 


find a food to be too spicy, whereas an elderly person may find the same 
food to be bland and unappetizing. 


Section Summary 


There are five primary tastes in humans: sweet, sour, bitter, salty, and 
umami. Each taste has its own receptor type that responds only to that taste. 
Tastants enter the body and are dissolved in saliva. Taste cells are located 
within taste buds, which are found on three of the four types of papillae in 
the mouth. 


Regarding olfaction, there are many thousands of odorants, but humans 
detect only about 10,000. Like taste receptors, olfactory receptors are each 
responsive to only one odorant. Odorants dissolve in nasal mucosa, where 
they excite their corresponding olfactory sensory cells. When these cells 
detect an odorant, they send their signals to other structures which 
ultimately are conveyed to the CNS. 


Review Questions 


Exercise: 


Problem: Which of the following has the fewest taste receptors? 


a. fungiform papillae 

b. circumvallate papillae 
c. foliate papillae 

d. filiform papillae 


Solution: 


D 


Exercise: 


Problem: 
How many different taste molecules do taste cells each detect? 


a. one 
b. five 
c. ten 
d. It depends on the spot on the tongue 


Solution: 
A 
Exercise: 
Problem: Salty foods activate the taste cells by ; 


a. exciting the taste cell directly 

b. causing hydrogen ions to enter the cell 
c. causing sodium channels to close 

d. binding directly to the receptors 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


From the perspective of the recipient of the signal, in what ways do 
pheromones differ from other odorants? 


Solution: 


Pheromones may not be consciously perceived, and pheromones can 
have direct physiological and behavioral effects on their recipients. 


Exercise: 
Problem: 


What might be the effect on an animal of not being able to perceive 
taste? 


Solution: 


The animal might not be able to recognize the differences in food 
sources and thus might not be able to discriminate between spoiled 
food and safe food or between foods that contain necessary nutrients, 
such as proteins, and foods that do not. 


Glossary 


bipolar neuron 
neuron with two processes from the cell body, typically in opposite 
directions 


glomerulus 
in the olfactory bulb, one of the two neural clusters that receives 
signals from one type of olfactory receptor 


gustation 
sense of taste 


odorant 
airborne molecule that stimulates an olfactory receptor 


olfaction 
sense of smell 


olfactory bulb 


neural structure in the vertebrate brain that receives signals from 
olfactory receptors 


olfactory epithelium 
specialized tissue in the nasal cavity where olfactory receptors are 
located 


olfactory receptor 
dendrite of a specialized neuron 


papilla 
one of the small bump-like projections from the tongue 


pheromone 
substance released by an animal that can affect the physiology or 
behavior of other animals 


tastant 
food molecule that stimulates gustatory receptors 


taste bud 
clusters of taste cells 


umami 


one of the five basic tastes, which is described as “savory” and which 


may be largely the taste of L-glutamate 


Hearing and Vestibular Sensation 
By the end of this section, you will be able to: 


e Describe the relationship of amplitude and frequency of a sound wave 
to attributes of sound 

e Trace the path of sound through the auditory system to the site of 
transduction of sound 

e Identify the structures of the vestibular system that respond to gravity 


Audition, or hearing, is important to humans and to other animals for many 
different interactions. It enables an organism to detect and receive 
information about danger, such as an approaching predator, and to 
participate in communal exchanges like those concerning territories or 
mating. On the other hand, although it is physically linked to the auditory 
system, the vestibular system is not involved in hearing. Instead, an 
animal’s vestibular system detects its own movement, both linear and 
angular acceleration and deceleration, and balance. 


Sound 


Auditory stimuli are sound waves, which are mechanical, pressure waves 
that move through a medium, such as air or water. There are no sound 
waves in a vacuum since there are no air molecules to move in waves. The 
speed of sound waves differs, based on altitude, temperature, and medium, 
but at sea level and a temperature of 20° C (68° F), sound waves travel in 
the air at about 343 meters per second. 


As is true for all waves, there are four main characteristics of a sound wave: 
frequency, wavelength, period, and amplitude. Frequency is the number of 
waves per unit of time, and in sound is heard as pitch. High-frequency 
(=15.000Hz) sounds are higher-pitched (short wavelength) than low- 
frequency (long wavelengths; <100Hz) sounds. Frequency is measured in 
cycles per second, and for sound, the most commonly used unit is hertz 
(Hz), or cycles per second. Most humans can perceive sounds with 
frequencies between 30 and 20,000 Hz. Women are typically better at 
hearing high frequencies, but everyone’s ability to hear high frequencies 
decreases with age. Dogs detect up to about 40,000 Hz; cats, 60,000 Hz; 


bats, 100,000 Hz; and dolphins 150,000 Hz, and American shad (Alosa 
sapidissima), a fish, can hear 180,000 Hz. Those frequencies above the 
human range are called ultrasound. 


Amplitude, or the dimension of a wave from peak to trough, in sound is 
heard as volume and is illustrated in [link]. The sound waves of louder 
sounds have greater amplitude than those of softer sounds. For sound, 
volume is measured in decibels (dB). The softest sound that a human can 
hear is the zero point. Humans speak normally at 60 decibels. 


Wavelength 


® 
3 
2 
r-% 
E 
<x 


For sound waves, wavelength 
corresponds to pitch. Amplitude of the 
wave corresponds to volume. The 
sound wave shown with a dashed line 
is softer in volume than the sound 
wave shown with a solid line. (credit: 
NIH) 


Reception of Sound 


In mammals, sound waves are collected by the external, cartilaginous part 
of the ear called the pinna, then travel through the auditory canal and cause 


vibration of the thin diaphragm called the tympanum or ear drum, the 
innermost part of the outer ear (illustrated in [link]). Interior to the 
tympanum is the middle ear. The middle ear holds three small bones called 
the ossicles, which transfer energy from the moving tympanum to the inner 
ear. The three ossicles are the malleus (also known as the hammer), the 
incus (the anvil), and stapes (the stirrup). The aptly named stapes looks 
very much like a stirrup. The three ossicles are unique to mammals, and 
each plays a role in hearing. The malleus attaches at three points to the 
interior surface of the tympanic membrane. The incus attaches the malleus 
to the stapes. In humans, the stapes is not long enough to reach the 
tympanum. If we did not have the malleus and the incus, then the vibrations 
of the tympanum would never reach the inner ear. These bones also 
function to collect force and amplify sounds. The ear ossicles are 
homologous to bones in a fish mouth: the bones that support gills in fish are 
thought to be adapted for use in the vertebrate ear over evolutionary time. 
Many animals (frogs, reptiles, and birds, for example) use the stapes of the 
middle ear to transmit vibrations to the middle ear. 


Stapes 
(attached to oval window) 


Semicircular 
canals 


Malleus 
Vestibular nerve 


Cochlear 
nerve 


Cochlea 


Ear canal : 
Tympanic 
cavity 


Tympanum Eustachian tube 


Round window 


Sound travels through the outer ear to the middle ear, which 
is bounded on its exterior by the tympanic membrane. The 


middle ear contains three bones called ossicles that transfer 
the sound wave to the oval window, the exterior boundary 
of the inner ear. The organ of Corti, which is the organ of 
sound transduction, lies inside the cochlea. (credit: 
modification of work by Lars Chittka, Axel Brockmann) 


Transduction of Sound 


Vibrating objects, such as vocal cords, create sound waves or pressure 
waves in the air. When these pressure waves reach the ear, the ear 
transduces this mechanical stimulus (pressure wave) into a nerve impulse 
(electrical signal) that the brain perceives as sound. The pressure waves 
strike the tympanum, causing it to vibrate. The mechanical energy from the 
moving tympanum transmits the vibrations to the three bones of the middle 
ear. The stapes transmits the vibrations to a thin diaphragm called the oval 
window, which is the outermost structure of the inner ear. The structures 
of the inner ear are found in the labyrinth, a bony, hollow structure that is 
the most interior portion of the ear. Here, the energy from the sound wave is 
transferred from the stapes through the flexible oval window and to the 
fluid of the cochlea. The vibrations of the oval window create pressure 
waves in the fluid (perilymph) inside the cochlea. The cochlea is a whorled 
structure, like the shell of a snail, and it contains receptors for transduction 
of the mechanical wave into an electrical signal (as illustrated in [link]). 
Inside the cochlea, the basilar membrane is a mechanical analyzer that 
runs the length of the cochlea, curling toward the cochlea’s center. 


The mechanical properties of the basilar membrane change along its length, 
such that it is thicker, tauter, and narrower at the outside of the whorl 
(where the cochlea is largest), and thinner, floppier, and broader toward the 
apex, or center, of the whorl (where the cochlea is smallest). Different 
regions of the basilar membrane vibrate according to the frequency of the 
sound wave conducted through the fluid in the cochlea. For these reasons, 
the fluid-filled cochlea detects different wave frequencies (pitches) at 
different regions of the membrane. When the sound waves in the cochlear 


fluid contact the basilar membrane, it flexes back and forth in a wave-like 
fashion. Above the basilar membrane is the tectorial membrane. 


Note: 


Art Connection 
Tectorial 
membrane 


Apex 


4,000 Hz 


Basilar Middle canal 
membrane 
Cochlear 


‘ 5, nerve 


{A 


n 


2,000 Hz 


Upper canal 
a 


Oval window > 

(sound waves 7 7,000 Hz 

enter) nz @ Organ 
Round window ~ Lower canal of Corti 


(sound waves 20,000Hz — (from the apex membrane 


exit) to the round 
window) 
: Tectorial 
Outer hair membrane 


cells 


Stereocilia 


Basilar membrane Cochlear nerve _ Inner hair cell 


In the human ear, sound waves cause the stapes to press against the 
oval window. Vibrations travel up the fluid-filled interior of the 
cochlea. The basilar membrane that lines the cochlea gets 
continuously thinner toward the apex of the cochlea. Different 


thicknesses of membrane vibrate in response to different frequencies 
of sound. Sound waves then exit through the round window. In the 
cross section of the cochlea (top right figure), note that in addition to 
the upper canal and lower canal, the cochlea also has a middle canal. 
The organ of Corti (bottom image) is the site of sound transduction. 
Movement of stereocilia on hair cells results in an action potential 
that travels along the auditory nerve. 


The site of transduction is in the organ of Corti (spiral organ). It is 
composed of hair cells held in place above the basilar membrane like 
flowers projecting up from soil, with their exposed short, hair-like 
stereocilia contacting or embedded in the tectorial membrane above them. 
The inner hair cells are the primary auditory receptors and exist in a single 
row, numbering approximately 3,500. The stereocilia from inner hair cells 
extend into small dimples on the tectorial membrane’s lower surface. The 
outer hair cells are arranged in three or four rows. They number 
approximately 12,000, and they function to fine tune incoming sound 
waves. The longer stereocilia that project from the outer hair cells actually 
attach to the tectorial membrane. All of the stereocilia are 
mechanoreceptors, and when bent by vibrations they respond by opening a 
gated ion channel. As a result, the hair cell membrane is depolarized, and a 
signal is transmitted to the chochlear nerve. Intensity (volume) of sound is 
determined by how many hair cells at a particular location are stimulated. 


The hair cells are arranged on the basilar membrane in an orderly way. The 
basilar membrane vibrates in different regions, according to the frequency 
of the sound waves impinging on it. Likewise, the hair cells that lay above 
it are most sensitive to a specific frequency of sound waves. Hair cells can 
respond to a small range of similar frequencies, but they require stimulation 
of greater intensity to fire at frequencies outside of their optimal range. The 
difference in response frequency between adjacent inner hair cells is about 
0.2 percent. Compare that to adjacent piano strings, which are about six 
percent different. Place theory, which is the model for how biologists think 


pitch detection works in the human ear, states that high frequency sounds 
selectively vibrate the basilar membrane of the inner ear near the entrance 
port (the oval window). Lower frequencies travel farther along the 
membrane before causing appreciable excitation of the membrane. The 
basic pitch-determining mechanism is based on the location along the 
membrane where the hair cells are stimulated. The place theory is the first 
step toward an understanding of pitch perception. Considering the extreme 
pitch sensitivity of the human ear, it is thought that there must be some 
auditory “sharpening” mechanism to enhance the pitch resolution. 


When sound waves produce fluid waves inside the cochlea, the basilar 
membrane flexes, bending the stereocilia that attach to the tectorial 
membrane. Their bending results in action potentials in the hair cells, and 
auditory information travels along the neural endings of the bipolar neurons 
of the hair cells (collectively, the auditory nerve) to the brain. When the 
hairs bend, they release an excitatory neurotransmitter at a synapse with a 
sensory neuron, which then conducts action potentials to the central nervous 
system. The cochlear branch of the vestibulocochlear cranial nerve sends 
information on hearing. The auditory system is very refined, and there is 
some modulation or “sharpening” built in. The brain can send signals back 
to the cochlea, resulting in a change of length in the outer hair cells, 
sharpening or dampening the hair cells’ response to certain frequencies. 


Note: 
Link to Learning 


openstax COLLEGE 


“Ell 


Watch an animation of sound entering the outer ear, moving through the 
ear structure, stimulating cochlear nerve impulses, and eventually sending 
signals to the temporal lobe. 


Higher Processing 


The inner hair cells are most important for conveying auditory information 
to the brain. About 90 percent of the afferent neurons carry information 
from inner hair cells, with each hair cell synapsing with 10 or so neurons. 
Outer hair cells connect to only 10 percent of the afferent neurons, and each 
afferent neuron innervates many hair cells. The afferent, bipolar neurons 
that convey auditory information travel from the cochlea to the medulla, 
through the pons and midbrain in the brainstem, finally reaching the 
primary auditory cortex in the temporal lobe. 


Vestibular Information 


The stimuli associated with the vestibular system are linear acceleration 
(gravity) and angular acceleration and deceleration. Gravity, acceleration, 
and deceleration are detected by evaluating the inertia on receptive cells in 
the vestibular system. Gravity is detected through head position. Angular 
acceleration and deceleration are expressed through turning or tilting of the 
head. 


The vestibular system has some similarities with the auditory system. It 
utilizes hair cells just like the auditory system, but it excites them in 
different ways. There are five vestibular receptor organs in the inner ear: the 
utricle, the saccule, and three semicircular canals. Together, they make up 
what’s known as the vestibular labyrinth that is shown in [link]. The utricle 
and saccule respond to acceleration in a straight line, such as gravity. The 
roughly 30,000 hair cells in the utricle and 16,000 hair cells in the saccule 
lie below a gelatinous layer, with their stereocilia projecting into the gelatin. 
Embedded in this gelatin are calcium carbonate crystals—like tiny rocks. 
When the head is tilted, the crystals continue to be pulled straight down by 
gravity, but the new angle of the head causes the gelatin to shift, thereby 
bending the stereocilia. The bending of the stereocilia stimulates the 
neurons, and they signal to the brain that the head is tilted, allowing the 
maintenance of balance. It is the vestibular branch of the vestibulocochlear 
cranial nerve that deals with balance. 


Posterior Canal 
Superior Canal 


Urticle 


< 

Ne BY Cochlea 
7) 
a, 


Horizontal 
Canal 


Vestibule 


Saccule 


The structure of the vestibular 
labyrinth is shown. (credit: 
modification of work by NIH) 


The fluid-filled semicircular canals are tubular loops set at oblique angles. 
They are arranged in three spatial planes. The base of each canal has a 
swelling that contains a cluster of hair cells. The hairs project into a 
gelatinous cap called the cupula and monitor angular acceleration and 
deceleration from rotation. They would be stimulated by driving your car 
around a corner, turning your head, or falling forward. One canal lies 
horizontally, while the other two lie at about 45 degree angles to the 
horizontal axis, as illustrated in [link]. When the brain processes input from 
all three canals together, it can detect angular acceleration or deceleration in 
three dimensions. When the head turns, the fluid in the canals shifts, 
thereby bending stereocilia and sending signals to the brain. Upon cessation 
accelerating or decelerating—or just moving—the movement of the fluid 
within the canals slows or stops. For example, imagine holding a glass of 
water. When moving forward, water may splash backwards onto the hand, 
and when motion has stopped, water may splash forward onto the fingers. 
While in motion, the water settles in the glass and does not splash. Note that 
the canals are not sensitive to velocity itself, but to changes in velocity, so 
moving forward at 6(0mph with your eyes closed would not give the 
sensation of movement, but suddenly accelerating or braking would 


stimulate the receptors. 


Higher Processing 


Hair cells from the utricle, saccule, and semicircular canals also 
communicate through bipolar neurons to the cochlear nucleus in the 
medulla. Cochlear neurons send descending projections to the spinal cord 
and ascending projections to the pons, thalamus, and cerebellum. 
Connections to the cerebellum are important for coordinated movements. 
There are also projections to the temporal cortex, which account for 
feelings of dizziness; projections to autonomic nervous system areas in the 
brainstem, which account for motion sickness; and projections to the 
primary somatosensory cortex, which monitors subjective measurements of 
the external world and self-movement. People with lesions in the vestibular 
area of the somatosensory cortex see vertical objects in the world as being 
tilted. Finally, the vestibular signals project to certain optic muscles to 
coordinate eye and head movements. 


Note: 
Link to Learning 


[=] [= 
& 


openstax COLLEGE 
= “1 
i: 7 
aL 
7 


Click through this interactive tutorial to review the parts of the ear and how 
they function to process sound. 


Section Summary 


Audition is important for territory defense, predation, predator defense, and 
communal exchanges. The vestibular system, which is not auditory, detects 
linear acceleration and angular acceleration and deceleration. Both the 
auditory system and vestibular system use hair cells as their receptors. 


Auditory stimuli are sound waves. The sound wave energy reaches the outer 
ear (pinna, canal, tympanum), and vibrations of the tympanum send the 
energy to the middle ear. The middle ear bones shift and the stapes transfers 
mechanical energy to the oval window of the fluid-filled inner ear cochlea. 
Once in the cochlea, the energy causes the basilar membrane to flex, 
thereby bending the stereocilia on receptor hair cells. This activates the 
receptors, which send their auditory neural signals to the brain. 


The vestibular system has five parts that work together to provide the sense 
of direction, thus helping to maintain balance. The utricle and saccule 
measure head orientation: their calcium carbonate crystals shift when the 
head is tilted, thereby activating hair cells. The semicircular canals work 
similarly, such that when the head is turned, the fluid in the canals bends 
stereocilia on hair cells. The vestibular hair cells also send signals to the 
thalamus and to somatosensory cortex, but also to the cerebellum, the 
structure above the brainstem that plays a large role in timing and 
coordination of movement. 


Art Connections 


Exercise: 


Problem: 


[link] Cochlear implants can restore hearing in people who have a 
nonfunctional cochlea. The implant consists of a microphone that 
picks up sound. A speech processor selects sounds in the range of 
human speech, and a transmitter converts these sounds to electrical 
impulses, which are then sent to the auditory nerve. Which of the 
following types of hearing loss would not be restored by a cochlear 
implant? 


a. Hearing loss resulting from absence or loss of hair cells in the 
organ of Corti. 

b. Hearing loss resulting from an abnormal auditory nerve. 

c. Hearing loss resulting from fracture of the cochlea. 

d. Hearing loss resulting from damage to bones of the middle ear. 


Solution: 


[link] B 


Review Questions 


Exercise: 


Problem: 


In sound, pitch is measured in , and volume is measured in 


a. nanometers (nm); decibels (dB) 
b. decibels (dB); nanometers (nm) 
c. decibels (dB); hertz (Hz) 
d. hertz (Hz); decibels (dB) 


Solution: 


D 


Exercise: 


Problem: Auditory hair cells are indirectly anchored to the 


a. basilar membrane 
b. oval window 

c. tectorial membrane 
d. ossicles 


Solution: 


A 


Exercise: 


Problem: 


Which of the following are found both in the auditory system and the 
vestibular system? 


a. basilar membrane 
b. hair cells 

c. semicircular canals 
d. ossicles 


Solution: 


B 


Free Response 


Exercise: 
Problem: 


How would a rise in altitude likely affect the speed of a sound 
transmitted through air? Why? 


Solution: 


The sound would slow down, because it is transmitted through the 
particles (gas) and there are fewer particles (lower density) at higher 
altitudes. 


Exercise: 


Problem: 


How might being in a place with less gravity than Earth has (such as 
Earth’s moon) affect vestibular sensation, and why? 


Solution: 


Because vestibular sensation relies on gravity’s effects on tiny crystals 
in the inner ear, a situation of reduced gravity would likely impair 
vestibular sensation. 


Glossary 


audition 
sense of hearing 


basilar membrane 
stiff structure in the cochlea that indirectly anchors auditory receptors 


cochlea 
whorled structure that contains receptors for transduction of the 
mechanical wave into an electrical signal 


incus 
(also, anvil) second of the three bones of the middle ear 


inner ear 
innermost part of the ear; consists of the cochlea and the vestibular 
system 


labyrinth 
bony, hollow structure that is the most internal part of the ear; contains 
the sites of transduction of auditory and vestibular information 


malleus 
(also, hammer) first of the three bones of the middle ear 


middle ear 
part of the hearing apparatus that functions to transfer energy from the 
tympanum to the oval window of the inner ear 


organ of Corti 
in the basilar membrane, the site of the transduction of sound, a 
mechanical wave, to a neural signal 


ossicle 
one of the three bones of the middle ear 


outer ear 
part of the ear that consists of the pinna, ear canal, and tympanum and 
which conducts sound waves into the middle ear 


oval window 
thin diaphragm between the middle and inner ears that receives sound 
waves from contact with the stapes bone of the middle ear 


pinna 
cartilaginous outer ear 


semicircular canal 
one of three half-circular, fluid-filled tubes in the vestibular labyrinth 
that monitors angular acceleration and deceleration 


stapes 
(also, stirrup) third of the three bones of the middle ear 


stereocilia 
in the auditory system, hair-like projections from hair cells that help 
detect sound waves 


tectorial membrane 
cochlear structure that lies above the hair cells and participates in the 
transduction of sound at the hair cells 


tympanum 
(also, tympanic membrane or ear drum) thin diaphragm between the 
outer and middle ears 


ultrasound 
sound frequencies above the human detectable ceiling of 
approximately 20,000 Hz 


Vision 
By the end of this section, you will be able to: 


e Explain how electromagnetic waves differs from sound waves 
e Trace the path of light through the eye to the point of the optic nerve 


Vision is the ability to detect light patterns from the outside environment 
and interpret them into images. Humans are bombarded with sensory 
information, and the sheer volume of visual information can be 
problematic. Fortunately, our visual system is able to attend to the most- 
important stimuli. The importance of vision to humans is further 
substantiated by the fact that about one-third of the human cerebral cortex is 
dedicated to analyzing and perceiving visual information. 


Light 


As with auditory stimuli, light travels in waves. The compression waves 
that compose sound must travel in a medium—a gas, a liquid, or a solid. In 
contrast, light is composed of electromagnetic waves and needs no medium; 
light can travel in a vacuum ((link]). The behavior of light can be discussed 
in terms of the behavior of waves and also in terms of the behavior of the 
fundamental unit of light—a packet of electromagnetic radiation called a 
photon. A glance at the electromagnetic spectrum shows that visible light 
for humans is just a small slice of the entire spectrum, which includes 
radiation that we cannot see as light because it is below the frequency of 
visible red light and above the frequency of visible violet light. 


Certain variables are important when discussing perception of light. 
Wavelength (which varies inversely with frequency) manifests itself as hue. 
Light at the red end of the visible spectrum has longer wavelengths (and is 
lower frequency), while light at the violet end has shorter wavelengths (and 
is higher frequency). The wavelength of light is expressed in nanometers 
(nm); one nanometer is one billionth of a meter. Humans perceive light that 
ranges between approximately 380 nm and 740 nm. Some other animals, 
though, can detect wavelengths outside of the human range. For example, 
bees see near-ultraviolet light in order to locate nectar guides on flowers, 
and some non-avian reptiles sense infrared light (heat that prey gives off). 


Wavelength 


(meters) Radio Microwave Infrared Visible Ultraviolet X-ray Gamma ray 


10° 10? 10° 5x 10° 10° 107° 10 


line a x ee @ 


Buildings Humans Honeybee Pinpoint Protozoans Molecules Atoms Atomic nuclei 
I SSS 
(Hz) 
10* 108 10% 10% 10** 108 10” 


In the electromagnetic spectrum, visible light lies between 
380 nm and 740 nm. (credit: modification of work by 
NASA) 


Wave amplitude is perceived as luminous intensity, or brightness. The 
standard unit of intensity of light is the candela, which is approximately the 
luminous intensity of a one common candle. 


Light waves travel 299,792 km per second in a vacuum, (and somewhat 
slower in various media such as air and water), and those waves atrive at 
the eye as long (red), medium (green), and short (blue) waves. What is 
termed “white light” is light that is perceived as white by the human eye. 
This effect is produced by light that stimulates equally the color receptors in 
the human eye. The apparent color of an object is the color (or colors) that 
the object reflects. Thus a red object reflects the red wavelengths in mixed 
(white) light and absorbs all other wavelengths of light. 


Anatomy of the Eye 


The photoreceptive cells of the eye, where transduction of light to nervous 
impulses occurs, are located in the retina (shown in [link]) on the inner 
surface of the back of the eye. But light does not impinge on the retina 
unaltered. It passes through other layers that process it so that it can be 
interpreted by the retina ([link]b). The cornea, the front transparent layer of 


the eye, and the crystalline lens, a transparent convex structure behind the 
comea, both refract (bend) light to focus the image on the retina. The iris, 
which is conspicuous as the colored part of the eye, is a circular muscular 
ring lying between the lens and cornea that regulates the amount of light 
entering the eye. In conditions of high ambient light, the iris contracts, 


reducing the size of the pupil at its center. In conditions of low light, the iris 
relaxes and the pupil enlarges. 


Note: 


Art Connection 
Pupil 


Iris Cornea Optic nerve 


Aqueous humour 


Ganglion 
cells 


Vitreous 
humour 


Amacrine 
cells 


Bipolar cells 


Horizontal 
cells 


Optic nerve 


Fovea 


Retinal 
blood vessels 


(a) The human eye is shown in cross section. (b) A blowup 
shows the layers of the retina. 


The main function of the lens is to focus light on the retina and fovea 
centralis. The lens is dynamic, focusing and re-focusing light as the eye 
rests on near and far objects in the visual field. The lens is operated by 
muscles that stretch it flat or allow it to thicken, changing the focal length 
of light coming through it to focus it sharply on the retina. With age comes 


the loss of the flexibility of the lens, and a form of farsightedness called 
presbyopia results. Presbyopia occurs because the image focuses behind 
the retina. Presbyopia is a deficit similar to a different type of 
farsightedness called hyperopia caused by an eyeball that is too short. For 
both defects, images in the distance are clear but images nearby are blurry. 
Myopia (nearsightedness) occurs when an eyeball is elongated and the 
image focus falls in front of the retina. In this case, images in the distance 
are blurry but images nearby are clear. 


There are two types of photoreceptors in the retina: rods and cones, named 
for their general appearance as illustrated in [link]. Rods are strongly 
photosensitive and are located in the outer edges of the retina. They detect 
dim light and are used primarily for peripheral and nighttime vision. Cones 
are weakly photosensitive and are located near the center of the retina. They 
respond to bright light, and their primary role is in daytime, color vision. 


Outer segment 
contains rhodopsin 


Rod outer 
segment ee 


Outer segment 
contains 
photopigments 


Oil droplet 
Nucleus 


Rods and cones are photoreceptors 
in the retina. Rods respond in low 
light and can detect only shades of 
gray. Cones respond in intense 
light and are responsible for color 


vision. (credit: modification of 
work by Piotr Sliwa) 


The fovea is the region in the center back of the eye that is responsible for 
acute vision. The fovea has a high density of just cones. When you bring 
your gaze to an object to examine it intently in bright light, the eyes orient 
so that the object’s image falls on the fovea. This is the area of the retina 
that gives us high clarity of vision. However, when looking at a star in the 
night sky or other object in dim light, the object can be better viewed by the 
peripheral vision because it is the rods in higher concentrations in the other 
regions of the retina, rather than the cones at the center, that operate better 
in low light. In low-light conditions, the rods allow us to see in shades of 
gray because cones require bright light to be stimulated and don't respond in 
low light conditions. 


Note: 
Link to Learning 


ue 


— 
mess OPenstax COLLEGE 


Review the anatomical structure of the eye, clicking on each part to 
practice identification. 


Processing Visual Input 


Trichromatic Coding 


There are three types of cones (with different photopsins), and they differ in 
the wavelength to which they are most responsive, as shown in [link]. Some 


cones are maximally responsive to short light waves of 420 nm, so they are 
called S cones (“S” for “short”); others respond maximally to waves of 530 
nm (M cones, for “medium”); a third group responds maximally to light of 
longer wavelengths, at 560 nm (L, or “long” cones). With only one type of 
cone, color vision would not be possible, and a two-cone (dichromatic) 
system has limitations. Primates use a three-cone (trichromatic) system, 
resulting in full color vision. 


The color we perceive is a result of the ratio of activity of our three types of 
cones. The colors of the visual spectrum, running from long-wavelength 
light to short, are red (700 nm), orange (600 nm), yellow (565 nm), green 
(497 nm), blue (470 nm), indigo (450 nm), and violet (425 nm). Humans 
have very sensitive perception of color and can distinguish about 500 levels 
of brightness, 200 different hues, and 20 steps of saturation, or about 2 
million distinct colors. 


Normalized absorbance 


400 500 600 700 


Wavelength (nm) 


Human rod cells and the different types of 
cone cells each have an optimal 
wavelength. However, there is 

considerable overlap in the wavelengths 
of light detected. 


Retinal Processing 


Visual signals leave the cones and rods, travel to the bipolar cells, and then 
to ganglion cells. A large degree of processing of visual information occurs 
in the retina itself, before visual information is sent to the brain. 


Higher Processing 


The myelinated axons of ganglion cells make up the optic nerves. Within 
the nerves, different axons carry different qualities of the visual signal. 
Some axons constitute the magnocellular (big cell) pathway, which carries 
information about form, movement, depth, and differences in brightness. 
Other axons constitute the parvocellular (small cell) pathway, which carries 
information on color and fine detail. Some visual information projects 
directly back into the brain, while other information crosses to the opposite 
side of the brain. This crossing of optical pathways produces the distinctive 
optic chiasma (Greek, for “crossing”) found at the base of the brain and 
allows us to coordinate information from both eyes. 


Once in the brain, visual information is processed in several places, and its 
routes reflect the complexity and importance of visual information to 
humans and other animals. 


Section Summary 


Vision is the only photo responsive sense. Visible light travels in waves and 
is a very small slice of the electromagnetic radiation spectrum. Light waves 
differ based on their frequency (wavelength = hue) and amplitude (intensity 
= brightness). 


In the vertebrate retina, there are two types of light receptors 
(photoreceptors): cones and rods. Cones, which are the source of color 
vision, exist in three forms—L, M, and S—and they are differentially 
sensitive to different wavelengths. Cones are located in the retina, along 
with the dim-light, achromatic receptors (rods). Cones are found in the 
fovea, the central region of the retina, whereas rods are found everywhere 
else throughout the retina. 


Visual signals travel from the eye over the axons of retinal ganglion cells, 
which make up the optic nerves. Ganglion cells come in several versions. 
Some ganglion cell axons carry information on form, movement, depth, and 
brightness, while other axons carry information on color and fine detail. 


Art Connections 


Exercise: 


Problem: 
[link] Which of the following statements about the human eye is false? 


a. Rods detect color, while cones detect only shades of gray. 

b. When light enters the retina, it passes the ganglion cells and 
bipolar cells before reaching photoreceptors at the rear of the eye. 

c. The iris adjusts the amount of light coming into the eye. 

d. The cornea is a protective layer on the front of the eye. 


Solution: 


[link] A 


Review Questions 


Exercise: 


Problem: Why do people over 55 often need reading glasses? 


a. Their cornea no longer focuses correctly. 

b. Their lens no longer focuses correctly. 

c. Their eyeball has elongated with age, causing images to focus in 
front of their retina. 

d. Their retina has thinned with age, making vision more difficult. 


Solution: 


B 
Exercise: 


Problem: 


Why is it easier to see images at night using peripheral, rather than the 
central, vision? 


a. Cones are denser in the periphery of the retina. 

b. Bipolar cells are denser in the periphery of the retina. 
c. Rods are denser in the periphery of the retina. 

d. The optic nerve exits at the periphery of the retina. 


Solution: 


C 


Glossary 


candela 
(cd) unit of measurement of luminous intensity (brightness) 


circadian 
describes a time cycle about one day in length 


cone 
weakly photosensitive, chromatic, cone-shaped neuron in the fovea of 
the retina that detects bright light and is used in daytime color vision 


cornea 
transparent layer over the front of the eye that helps focus light waves 


fovea 


region in the center of the retina with a high density of photoreceptors 
and which is responsible for acute vision 


hyperopia 
(also, farsightedness) visual defect in which the image focus falls 
behind the retina, thereby making images in the distance clear, but 
close-up images blurry 


iris 
pigmented, circular muscle at the front of the eye that regulates the 
amount of light entering the eye 


lens 
transparent, convex structure behind the cornea that helps focus light 
waves on the retina 


myopia 
(also, nearsightedness) visual defect in which the image focus falls in 
front of the retina, thereby making images in the distance blurry, but 
close-up images clear 


presbyopia 
visual defect in which the image focus falls behind the retina, thereby 
making images in the distance clear, but close-up images blurry; 
caused by age-based changes in the lens 


pupil 
small opening though which light enters 


retina 
layer of photoreceptive and supporting cells on the inner surface of the 
back of the eye 


rhodopsin 
main photopigment in vertebrates 


rod 


strongly photosensitive, achromatic, cylindrical neuron in the outer 
edges of the retina that detects dim light and is used in peripheral and 
nighttime vision 


superior colliculus 
paired structure in the top of the midbrain, which manages eye 
movements and auditory integration 


suprachiasmatic nucleus 
cluster of cells in the hypothalamus that plays a role in the circadian 
cycle 


tonic activity 

in a neuron, slight continuous activity while at rest 
vision 

sense of sight 


Introduction to the Immune System 
class="introduction" 


In this 
compound 
light 
micrograph 
purple- 
Stained 
neutrophil 
(upper left) 
and 
eosinophil 
(lower right) 
are white 
blood cells 
that float 
among red 
blood cells 
in this blood 
smear. 
Neutrophils 
provide an 
early, rapid, 
and 
nonspecific 
defense 
against 
invading 
pathogens. 
Eosinophils 
play a 
variety of 
roles in the 
immune 
response. 
Red blood 


cells are 
about 7-8 
pm in 
diameter, 
anda 
neutrophil is 
about 10— 
12pm. 
(credit: 
modificatio 
n of work 
by Dr. 
David 
Csaba) 


The environment consists of numerous pathogens, which are agents, 
usually microorganisms, that cause diseases in their hosts. A host is the 
organism that is invaded and often harmed by a pathogen. Pathogens 
include bacteria, protists, fungi and other infectious organisms. We are 
constantly exposed to pathogens in food and water, on surfaces, and in the 
air. Mammalian immune systems evolved for protection from such 
pathogens; they are composed of an extremely diverse array of specialized 


cells and soluble molecules that coordinate a rapid and flexible defense 
system capable of providing protection from a majority of these disease 
agents. 


Components of the immune system constantly search the body for signs of 
pathogens. When pathogens are found, immune factors are mobilized to the 
site of an infection. The immune factors identify the nature of the pathogen, 
strengthen the corresponding cells and molecules to combat it efficiently, 
and then halt the immune response after the infection is cleared to avoid 
unnecessary host cell damage. The immune system can remember 
pathogens to which it has been exposed to create a more efficient response 
upon re-exposure. This memory can last several decades. Features of the 
immune system, such as pathogen identification, specific response, 
amplification, retreat, and remembrance are essential for survival against 
pathogens. The immune response can be classified as either innate or active. 
The innate immune response is always present and attempts to defend 
against all pathogens rather than focusing on specific ones. Conversely, the 
adaptive immune response stores information about past infections and 
mounts pathogen-specific defenses. 


Glossary 


pathogen 
an agent, usually a microorganism, that causes disease in the 
organisms that they invade 


host 
an organism that is invaded by a pathogen or parasite 


Innate Immunity 
By the end of this section, you will be able to: 


¢ Describe the body’s innate physical and chemical defenses 
e Explain the inflammatory response 
e Describe the complement system 


The human immune system is a complex, multilayered system for 
defending against external and internal threats to the integrity of the body. 
The system can be divided into two types of defense systems: the innate 
immune system, which is nonspecific toward a particular kind of pathogen, 
and the adaptive immune system, which is specific ({link]). Innate 
immunity is not caused by an infection or vaccination and depends initially 
on physical and chemical barriers that work on all pathogens, sometimes 
called the first line of defense. The second line of defense of the innate 
system includes chemical signals that produce inflammation and fever 
responses as well as mobilizing protective cells and other chemical 
defenses. The adaptive immune system mounts a highly specific response to 
substances and organisms that do not belong in the body. The adaptive 
system takes longer to respond and has a memory system that allows it to 
respond with greater intensity should the body reencounter a pathogen even 
years later. 


Vertebrate Immunity 
Innate Immune System Adaptive Immune System 
Physical Barriers Internal Defenses 


¢ Skin, hair, cilia + Inflammatory response + Antibodies and the humoral immune response 


* Mucus membranes * Complement proteins * Cell-mediated immune response 


* Mucus and chemical secretions + Phagocytic cells * Memory response 


* Digestive enzymes in mouth + Natural killer (NK) cells 


* Stomach acid 


There are two main parts to the vertebrate immune system. The 
innate immune system, which is made up of physical barriers 
and internal defenses, responds to all pathogens. The adaptive 

immune system is highly specific. 


External and Chemical Barriers 


The body has significant physical barriers to potential pathogens. The skin 
contains the protein keratin, which resists physical entry into cells. Other 
body surfaces, particularly those associated with body openings, are 
protected by the mucous membranes. The sticky mucus provides a physical 
trap for pathogens, preventing their movement deeper into the body. The 
openings of the body, such as the nose and ears, are protected by hairs that 
catch pathogens, and the mucous membranes of the upper respiratory tract 
have cilia that constantly move pathogens trapped in the mucus coat up to 
the mouth. 


The skin and mucous membranes also create a chemical environment that is 
hostile to many microorganisms. The surface of the skin is acidic, which 
prevents bacterial growth. Saliva, mucus, and the tears of the eye contain an 
enzyme that breaks down bacterial cell walls. The stomach secretions create 
a highly acidic environment, which kills many pathogens entering the 
digestive system. 


Finally, the surface of the body and the lower digestive system have a 
community of microorganisms such as bacteria, archaea, and fungi that 
coexist without harming the body. There is evidence that these organisms 
are highly beneficial to their host, combating disease-causing organisms and 
outcompeting them for nutritional resources provided by the host body. 
Despite these defenses, pathogens may enter the body through skin 
abrasions or punctures, or by collecting on mucosal surfaces in large 
numbers that overcome the protections of mucus or cilia. 


Internal Defenses 


When pathogens enter the body, the innate immune system responds with a 
variety of internal defenses. These include the inflammatory response, 
phagocytosis, natural killer cells, and the complement system. White blood 
cells in the blood and lymph recognize pathogens as foreign to the body. A 
white blood cell is larger than a red blood cell, is nucleated, and is typically 
able to move using amoeboid locomotion. Because they can move on their 
own, white blood cells can leave the blood to go to infected tissues. For 


example, a monocyte is a type of white blood cell that circulates in the 
blood and lymph and develops into a macrophage after it moves into 
infected tissue. A macrophage is a large cell that engulfs foreign particles 
and pathogens. Mast cells are produced in the same way as white blood 
cells, but unlike circulating white blood cells, mast cells take up residence 
in connective tissues and especially mucosal tissues. They are responsible 
for releasing chemicals in response to physical injury. They also play a role 
in the allergic response, which will be discussed later in the chapter. 


When a pathogen is recognized as foreign, chemicals called cytokines are 
released. A cytokine is a chemical messenger that regulates cell 
differentiation (form and function), proliferation (production), and gene 
expression to produce a variety of immune responses. Approximately 40 
types of cytokines exist in humans. In addition to being released from white 
blood cells after pathogen recognition, cytokines are also released by the 
infected cells and bind to nearby uninfected cells, inducing those cells to 
release cytokines. This positive feedback loop results in a burst of cytokine 
production. 


One class of early-acting cytokines is the interferons, which are released by 
infected cells as a warning to nearby uninfected cells. An interferon is a 
small protein that signals a viral infection to other cells. The interferons 
stimulate uninfected cells to produce compounds that interfere with viral 
replication. Interferons also activate macrophages and other cells. 


The Inflammatory Response and Phagocytosis 


The first cytokines to be produced encourage inflammation, a localized 
redness, swelling, heat, and pain. Inflammation is a response to physical 
trauma, such as a cut or a blow, chemical irritation, and infection by 
pathogens (viruses, bacteria, or fungi). The chemical signals that trigger an 
inflammatory response enter the extracellular fluid and cause capillaries to 
dilate (expand) and capillary walls to become more permeable, or leaky. 
The serum and other compounds leaking from capillaries cause swelling of 
the area, which in turn causes pain. Various kinds of white blood cells are 
attracted to the area of inflammation. The types of white blood cells that 


arrive at an inflamed site depend on the nature of the injury or infecting 
pathogen. For example, a neutrophil is an early arriving white blood cell 
that engulfs and digests pathogens. Neutrophils are the most abundant white 
blood cells of the immune system ([Llink]). Macrophages follow neutrophils 
and take over the phagocytosis function and are involved in the resolution 
of an inflamed site, cleaning up cell debris and pathogens. 


White blood cells 
(leukocytes) release 
chemicals to stimulate 
the inflammatory 
response following a 
cut in the skin. 


Cytokines also send feedback to cells of the nervous system to bring about 
the overall symptoms of feeling sick, which include lethargy, muscle pain, 
and nausea. Cytokines also increase the core body temperature, causing a 
fever. The elevated temperatures of a fever inhibit the growth of pathogens 
and speed up cellular repair processes. For these reasons, suppression of 
fevers should be limited to those that are dangerously high. 


Note: 


Concept in Action 


Opes aC) 


4 


Check out this 23-second, stop-motion video showing a neutrophil that 
searches and engulfs fungus spores during an elapsed time of 79 minutes. 


Natural Killer Cells 


A lymphocyte is a white blood cell that contains a large nucleus ([link]). 
Most lymphocytes are associated with the adaptive immune response, but 
infected cells are identified and destroyed by natural killer cells, the only 
lymphocytes of the innate immune system. A natural killer (NK) cell is a 
lymphocyte that can kill cells infected with viruses (or cancerous cells). NK 
cells identify intracellular infections, especially from viruses, by the altered 
expression of major histocompatibility class (MHC) I molecules on the 
surface of infected cells. MHC class I molecules are proteins on the 
surfaces of all nucleated cells that provide a sample of the cell’s internal 
environment at any given time. Unhealthy cells, whether infected or 
cancerous, display an altered MHC class I complement on their cell 
surfaces. 


i, 


Lymphocytes, such 
as NK cells, are 
characterized by 
their large nuclei 

that actively absorb 
Wright stain and 
therefore appear 

dark colored under 
a microscope. 
(credit: scale-bar 
data from Matt 
Russell) 


After the NK cell detects an infected or tumor cell, it induces programmed 
cell death, or apoptosis. Phagocytic cells then come along and digest the 

cell debris left behind. NK cells are constantly patrolling the body and are 
an effective mechanism for controlling potential infections and preventing 
cancer progression. The various types of immune cells are shown in [link]. 


Mast cell Natural killer cell Monocyte Macrophage Neutrophil 


Cells involved in the innate immune response include mast 
cells, natural killer cells, and white blood cells, such as 
monocytes, macrophages and neutrophils. 


Complement 


An array of approximately 20 types of proteins, called a complement 
system, is also activated by infection or the activity of the cells of the 
adaptive immune system and functions to destroy extracellular pathogens. 
Liver cells and macrophages synthesize inactive forms of complement 
proteins continuously; these proteins are abundant in the blood serum and 
are capable of responding immediately to infecting microorganisms. The 
complement system is so named because it is complementary to the innate 
and adaptive immune system. Complement proteins bind to the surfaces of 
microorganisms and are particularly attracted to pathogens that are already 
tagged by the adaptive immune system. This “tagging” involves the 
attachment of specific proteins called antibodies (discussed in detail later) 
to the pathogen. When they attach, the antibodies change shape providing a 
binding site for one of the complement proteins. After the first few 
complement proteins bind, a cascade of binding in a specific sequence of 
proteins follows in which the pathogen rapidly becomes coated in 
complement proteins. 


Complement proteins perform several functions, one of which is to serve as 
a marker to indicate the presence of a pathogen to phagocytic cells and 
enhance engulfment. Certain complement proteins can combine to open 
pores in microbial cell membranes and cause lysis of the cells. 


Section Summary 


The innate immune system consists first of physical and chemical barriers 
to infection including the skin and mucous membranes and their secretions, 
ciliated surfaces, and body hairs. The second line of defense is an internal 
defense system designed to counter pathogenic threats that bypass the 
physical and chemical barriers of the body. Using a combination of cellular 
and molecular responses, the innate immune system identifies the nature of 
a pathogen and responds with inflammation, phagocytosis, cytokine release, 
destruction by NK cells, or the complement system. 


Review Questions 


Exercise: 
Problem: 


Which of the following is a barrier against pathogens provided by the 
skin? 


a. low pH 
b. mucus 
c. tears 
d. cilia 


Solution: 


A 
Exercise: 


Problem: 


Although interferons have several effects, they are particularly useful 
against infections with which type of pathogen? 


a. bacteria 
b. viruses 


c. fungi 
d. helminths 


Solution: 


B 
Exercise: 


Problem: 


Which innate immune system component uses MHC class I molecules 
directly in its defense strategy? 


a. macrophages 
b. neutrophils 
c. NK cells 

d. interferon 


Solution: 


C 


Free Response 


Exercise: 


Problem: 

Different MHC class I molecules between donor and recipient cells 
can lead to rejection of a transplanted organ or tissue. Suggest a reason 
for this. 


Solution: 


If the MHC class I molecules expressed on donor cells differ from the 
MHC class I molecules expressed on recipient cells, NK cells may 


identify the donor cells as not normal and produce enzymes to induce 
the donor cells to undergo apoptosis, which would destroy the 
transplanted organ. 


Exercise: 


Problem: 


If a series of genetic mutations prevented some, but not all, of the 
complement proteins from binding antibodies or pathogens, would the 
entire complement system be compromised? 


Solution: 


The entire complement system would probably be affected even when 
only a few members were mutated such that they could no longer bind. 
Because the complement involves the binding of activated proteins in 
a specific sequence, when one or more proteins in the sequence is 
absent, the subsequent proteins would be incapable of binding to elicit 
the complement’s pathogen-destructive effects. 


Glossary 


complement system 
an array of approximately 20 soluble proteins of the innate immune 
system that enhance phagocytosis, bore holes in pathogens, and recruit 
lymphocytes 


cytokine 
a chemical messenger that regulates cell differentiation, proliferation, 
and gene expression to effect immune responses 


inflammation 
the localized redness, swelling, heat, and pain that results from the 
movement of leukocytes through opened capillaries to a site of 
infection 


innate immunity 


an immunity that occurs naturally because of genetic factors or 
physiology, and is not caused by infection or vaccination 


interferon 
a cytokine that inhibits viral replication 


lymphocyte 
a type of white blood cell that includes natural killer cells of the innate 
immune system and B and T cells of the adaptive immune system 


macrophage 
a large phagocytic cell that engulfs foreign particles and pathogens 


major histocompatibility class (MHC) I 
a group of proteins found on the surface of all nucleated cells that 
signals to immune cells whether the cell is normal or is infected or 
cancerous; it also provides the appropriate sites into which antigens 
can be loaded for recognition by lymphocytes 


mast cell 
a leukocyte that produces inflammatory molecules, such as histamine, 
in response to large pathogens 


monocyte 
a type of white blood cell that circulates in the blood and lymph and 
differentiates into a macrophage after it moves into infected tissue 


natural killer (NK) cell 
a lymphocyte that can kill cells infected with viruses or tumor cells 


neutrophil 
a phagocytic leukocyte that engulfs and digests pathogens 


white blood cell 
a nucleated cell found in the blood that is a part of the immune system; 
also called leukocytes 


Adaptive Immunity 
By the end of this section, you will be able to: 


e Explain adaptive immunity 
e Describe the cell-mediated immune response and humoral/antibody- 
mediated immune response 


The adaptive, or acquired, immune response takes days or even weeks to 
become established—much longer than the innate response; however, 
adaptive immunity is more specific to an invading pathogen. Adaptive 
immunity is an immunity that occurs after exposure to an antigen either 
from a pathogen or a vaccination. An antigen is a molecule that stimulates 
a response in the immune system. This part of the immune system is 
activated when the innate immune response is insufficient to control an 
infection. In fact, without information from the innate immune system, the 
adaptive response could not be mobilized. There are two types of adaptive 
responses: the cell-mediated immune response, which is controlled by 
activated T cells, and the humoral or antibody- immune response, which 
is controlled by activated B cells and antibodies. Activated T and B cells 
whose surface binding sites are specific to the molecules on the pathogen 
greatly increase in numbers and attack the invading pathogen. Their attack 
can kill pathogens directly or they can secrete antibodies that enhance the 
phagocytosis of pathogens and disrupt the infection. Adaptive immunity 
also involves a memory to give the host long-term protection from 
reinfection with the same type of pathogen; on reexposure, this host 
memory will facilitate a rapid and powerful response. 


B and T Cells 


Lymphocytes, which are white blood cells, are formed with other blood 
cells in the red bone marrow found in many flat bones, such as the shoulder 
or pelvic bones. The two types of lymphocytes of the adaptive immune 
response are B and T cells ((link]). Whether an immature lymphocyte 
becomes a B cell or T cell depends on where in the body it matures. The B 
cells remain in the bone marrow to mature (hence the name “B” for “bone 
marrow”), while T cells migrate to the thymus, where they mature (hence 
the name “T” for “thymus”). 


Maturation of a B or T cell involves becoming immunocompetent, meaning 
that it can recognize, by binding, a specific molecule or antigen (discussed 
below). During the maturation process, B and T cells that bind too strongly 
to the body’s own cells are eliminated in order to minimize an immune 
response against the body’s own tissues. Those cells that react weakly to the 
body’s own cells, but have highly specific receptors on their cell surfaces 
that allow them to recognize a foreign molecule, or antigen, remain. This 
process occurs during fetal development and continues throughout life. The 
specificity of this receptor is determined by the genetics of the individual 
and is present before a foreign molecule is introduced to the body or 
encountered. Thus, it is genetics and not experience that initially provides a 
vast array of cells, each capable of binding to a different specific foreign 
molecule. Once they are immunocompetent, the T and B cells will migrate 
to the spleen and lymph nodes where they will remain until they are called 
on during an infection. B cells are involved in the humoral immune 
response, which targets pathogens loose in blood and lymph, and T cells are 
involved in the cell-mediated immune response, which targets infected 
cells. 


This scanning electron 
micrograph shows a T 
lymphocyte. T and B 
cells are indistinguishable 
by light microscopy but 


can be differentiated 
experimentally by 
probing their surface 
receptors. (credit: 
modification of work by 
NCI; scale-bar data from 
Matt Russell) 


Humoral (or Antibody)-Mediated Immune Response 


As mentioned, an antigen is a molecule that stimulates a response in the 
immune system. Not every molecule is antigenic. B cells participate in a 
chemical response to antigens present in the body by producing specific 
antibodies that circulate throughout the body and bind with the antigen 
whenever it is encountered. This is known as the humoral immune 
response. As discussed, during maturation of B cells, a set of highly specific 
B cells are produced that have many antigen receptor molecules in their 
membrane ([link]). 


Antigen 
és Antigen-binding site 


B cell receptors are 
embedded in the 


membranes of B 
cells and bind a 
variety of antigens 
through their 
variable regions. 


Each B cell has only one kind of antigen receptor, which makes every B cell 
different. Once the B cells mature in the bone marrow, they migrate to 
lymph nodes or other lymphatic organs. When a B cell encounters the 
antigen that binds to its receptor, the antigen molecule is brought into the 
cell by endocytosis and reappears on the surface of the cell bound to an 
MHC class II molecule. When this process is complete, the B cell is 
sensitized. In most cases, the sensitized B cell must then encounter a 
specific kind of T cell, called a helper T cell, before it is activated. The 
helper T cell must already have been activated through an encounter with 
the antigen (discussed below). 


The helper T cell binds to the antigen-MHC class II complex and is induced 
to release cytokines that induce the B cell to divide rapidly, which makes 
thousands of identical (clonal) cells via mitosis. This process is called 
clonal expansion. These daughter cells become either plasma cells or 
memory B cells. The memory B cells remain inactive at this point, until 
another later encounter with the antigen, caused by a reinfection by the 
same bacteria or virus, results in them dividing into a new population of 
plasma cells. The plasma cells, on the other hand, produce and secrete large 
quantities, up to 100 million molecules per hour, of antibody molecules. An 
antibody, also known as an immunoglobulin (Ig), is a protein that is 
produced by plasma cells after stimulation by an antigen. Antibodies are the 
agents of humoral immunity. Antibodies occur in the blood, in gastric and 
mucus secretions, and in breast milk. Antibodies in these bodily fluids can 
bind pathogens and mark them for destruction by phagocytes before they 
can infect cells. 


These antibodies circulate in the blood stream and lymphatic system and 
bind with the antigen whenever it is encountered. The binding can fight 


infection in several ways. Antibodies can bind to viruses or bacteria and 
interfere with the chemical interactions required for them to infect or bind 
to other cells. The antibodies may create bridges between different particles 
containing antigenic sites clumping them all together and preventing their 
proper functioning. The antigen-antibody complex stimulates the 
complement system described previously, destroying the cell bearing the 
antigen. Phagocytic cells, such as those already described, are attracted by 
the antigen-antibody complexes, and phagocytosis is enhanced when the 
complexes are present. Finally, antibodies stimulate inflammation, and their 
presence in mucus and on the skin prevents pathogen attack. 


Antibodies coat extracellular pathogens and neutralize them by blocking 
key sites on the pathogen that enhance their infectivity (such as receptors 
that “dock” pathogens on host cells) ({link]). Antibody neutralization can 
prevent pathogens from entering and infecting host cells. The neutralized 
antibody-coated pathogens can then be filtered by the spleen and eliminated 
in urine or feces. 


Antibodies also mark pathogens for destruction by phagocytic cells, such as 
macrophages or neutrophils, in a process called opsonization. In a process 
called complement fixation, some antibodies provide a place for 
complement proteins to bind. The combination of antibodies and 
complement promotes rapid clearing of pathogens. 


The production of antibodies by plasma cells in response to an antigen is 
called active immunity and describes the host’s active response of the 
immune system to an infection or to a vaccination. There is also a passive 
immune response where antibodies come from an outside source, instead of 
the individual’s own plasma cells, and are introduced into the host. For 
example, antibodies circulating in a pregnant woman’s body move across 
the placenta into the developing fetus. The child benefits from the presence 
of these antibodies for up to several months after birth. In addition, a 
passive immune response is possible by injecting antibodies into an 
individual in the form of an antivenom to a snake-bite toxin or antibodies in 
blood serum to help fight a hepatitis infection. This gives immediate 
protection since the body does not need the time required to mount its own 
response. 


(a) Neutralization Antibodies prevent a virus or toxic protein 
from binding their target. 


Antibody 


Virus 


Diptheria toxin 
(b) Opsonization A pathogen tagged by antibodies is consumed 
by a macrophage or neutrophil. 


Macrophage 


Pathogen 


(c) Complement activation Antibodies attached to the surface 
of a pathogen cell activate the complement system. 


Pores formed 
by complement 


Antibodies may inhibit infection 
by (a) preventing the antigen 
from binding its target, (b) 
tagging a pathogen for 
destruction by macrophages or 
neutrophils, or (c) activating the 
complement cascade. 


Cell-Mediated Immunity 


Unlike B cells, T lymphocytes are unable to recognize pathogens without 
assistance. Instead, dendritic cells and macrophages first engulf and digest 


pathogens into hundreds or thousands of antigens. Then, an antigen- 
presenting cell (APC) detects, engulfs, and informs the adaptive immune 
response about an infection. When a pathogen is detected, these APCs will 
engulf and break it down through phagocytosis. Antigen fragments will 
then be transported to the surface of the APC, where they will serve as an 
indicator to other immune cells. A dendritic cell is an immune cell that 
mops up antigenic materials in its surroundings and presents them on its 
surface. Dendritic cells are located in the skin, the linings of the nose, lungs, 
stomach, and intestines. These positions are ideal locations to encounter 
invading pathogens. Once they are activated by pathogens and mature to 
become APCs they migrate to the spleen or a lymph node. Macrophages 
also function as APCs. After phagocytosis by a macrophage, the phagocytic 
vesicle fuses with an intracellular lysosome. Within the resulting 
phagolysosome, the components are broken down into fragments; the 
fragments are then loaded onto MHC class II molecules and are transported 
to the cell surface for antigen presentation ([{link]). Helper T cells cannot 
properly respond to an antigen unless it is processed and embedded in an 
MHC class II molecule. The APCs express MHC class II on their surfaces, 
and when combined with a foreign antigen, these complexes signal an 
invader. 


(2) Abacterium 
engulfed by a 
macrophage is 
encased ina 


vacuole. (2) Lysosomes fuse 


with the vacuole 
and digest the 


Antigen bacterium. 


Macrophage 


(3) Antigens from digested 
bacterium are presented with 
MHC II on the cell surface. 


An antigen-presenting cell 
(APC), such as a macrophage, 
engulfs a foreign antigen, 


partially digests it in a lysosome, 

and then embeds it in an MHC 
class II molecule for 
presentation at the cell surface. 
Lymphocytes of the adaptive 

immune response must interact 
with antigen-embedded MHC 

class IT molecules to mature into 

functional immune cells. 


Note: 
Concept in Action 


View this animation from Rockefeller University to see how dendritic cells 
act as sentinels in the body’s immune system. 


T cells have many functions. Some respond to APCs of the innate immune 
system and indirectly induce immune responses by releasing cytokines. 
Others stimulate B cells to start the humoral response as described 
previously. Another type of T cell detects APC signals and directly kills the 
infected cells, while some are involved in suppressing inappropriate 
immune reactions to harmless or “self” antigens. 


There are two main types of T cells: helper T lymphocytes (T}) and the 
cytotoxic T lymphocytes (Tc). The Ty lymphocytes function indirectly to 
tell other immune cells about potential pathogens. 


Cytotoxic T cells (Tc) are the key component of the cell-mediated part of 
the adaptive immune system and attack and destroy infected cells. Tc cells 
are particularly important in protecting against viral infections; this is 
because viruses replicate within cells where they are shielded from 
extracellular contact with circulating antibodies. Once activated, the Tc 
creates a large clone of cells with one specific set of cell-surface receptors, 
as in the case with clonal expansion of activated B cells. As with B cells, 
the clone includes active T¢ cells and inactive memory T¢ cells. The 
resulting active Tc cells then identify infected host cells. Because of the 
time required to generate a population of clonal T and B cells, there is a 
delay in the adaptive immune response compared to the innate immune 
response. 


Tc cells attempt to identify and destroy infected cells before the pathogen 
can replicate and escape, thereby halting the progression of intracellular 
infections. Tc cells also support NK lymphocytes to destroy early cancers. 
Cytokines secreted by the T};1 response that stimulates macrophages also 
stimulate Tc cells and enhance their ability to identify and destroy infected 
cells and tumors. A summary of how the humoral and cell-mediated 
immune responses are activated appears in [link]. 


B plasma cells and T¢ cells are collectively called effector cells because 
they are involved in “effecting” (bringing about) the immune response of 
killing pathogens and infected host cells. 


Bacterium 
Antigen > 
a 


Macrophage 


Antigens from digested 
bacterium are presented with 


MHC II on the cell surface. In response to cytokines, 
the T cell clones itself. 


Activated 
helper T cell 


Humoral 


; —, immune 
> 


clo 
L X .. j response 
ee — cell clones itself 


Cell-mediated 
immune 
response 


“2 Cytokines 
; "2 T cell becomes 
Cytokines activate cytotoxic. 
B cells and T cells 


A helper T cell becomes activated by binding to an antigen 
presented by an APC via the MHCII receptor, causing it to 
release cytokines. Depending on the cytokines released, this 
activates either the humoral or the cell-mediated immune 
response. 


Immunological Memory 


The adaptive immune system has a memory component that allows for a 
rapid and large response upon reinvasion of the same pathogen. During the 
adaptive immune response to a pathogen that has not been encountered 
before, known as the primary immune response, plasma cells secreting 
antibodies and differentiated T cells increase, then plateau over time. As B 
and T cells mature into effector cells, a subset of the naive populations 
differentiates into B and T memory cells with the same antigen specificities 
({link]). A memory cell is an antigen-specific B or T lymphocyte that does 


not differentiate into an effector cell during the primary immune response, 
but that can immediately become an effector cell on reexposure to the same 
pathogen. As the infection is cleared and pathogenic stimuli subside, the 
effectors are no longer needed and they undergo apoptosis. In contrast, the 
memory cells persist in the circulation. 


Note: 
Art Connection 


B cell receptor 
Antigen on 
bacterium 
B cell 


Helper T cell 


AGE Cytokines 
T cell receptor 


(oy 
~) Ay Tt 
: gps» 


Memory B cells Plasma cells 


After initially binding an antigen to 
the B cell receptor, a B cell 
internalizes the antigen and 

presents it on MHC class II. A 
helper T cell recognizes the MHC 
class II- antigen complex and 
activates the B cell. As a result, 
memory B cells and plasma cells 
are made. 


If the pathogen is never encountered again during the individual’s lifetime, 
B and T memory cells will circulate for a few years or even several decades 
and will gradually die off, having never functioned as effector cells. 
However, if the host is re-exposed to the same pathogen type, circulating 
memory cells will immediately differentiate into plasma cells and T¢ cells 
without input from APCs or Ty cells. This is known as the secondary 
immune response. One reason why the adaptive immune response is 
delayed is because it takes time for naive B and T cells with the appropriate 
antigen specificities to be identified, activated, and proliferate. On 
reinfection, this step is skipped, and the result is a more rapid production of 
immune defenses. Memory B cells that differentiate into plasma cells 
output tens to hundreds-fold greater antibody amounts than were secreted 
during the primary response ((link]). This rapid and dramatic antibody 
response may stop the infection before it can even become established, and 
the individual may not realize they had been exposed. 


Antibody concentration ——» 


Primary immune Secondary immune 
response response 
Time ——> 


In the primary response to 
infection, antibodies are 
secreted first from plasma 
cells. Upon re-exposure to 


the same pathogen, memory 
cells differentiate into 
antibody-secreting plasma 
cells that output a greater 
amount of antibody for a 
longer period of time. 


Vaccination is based on the knowledge that exposure to noninfectious 
antigens, derived from known pathogens, generates a mild primary immune 
response. The immune response to vaccination may not be perceived by the 
host as illness but still confers immune memory. When exposed to the 
corresponding pathogen to which an individual was vaccinated, the reaction 
is similar to a secondary exposure. Because each reinfection generates more 
memory cells and increased resistance to the pathogen, some vaccine 
courses involve one or more booster vaccinations to mimic repeat 
exposures. 


The Lymphatic System 


Lymph is the watery fluid that bathes tissues and organs and contains 
protective white blood cells but does not contain erythrocytes. Lymph 
moves about the body through the lymphatic system, which is made up of 
vessels, lymph ducts, lymph glands, and organs, such as tonsils, adenoids, 
thymus, and spleen. 


Although the immune system is characterized by circulating cells 
throughout the body, the regulation, maturation, and intercommunication of 
immune factors occur at specific sites. The blood circulates immune cells, 
proteins, and other factors through the body. Approximately 0.1 percent of 
all cells in the blood are leukocytes, which include monocytes (the 
precursor of macrophages) and lymphocytes. Most cells in the blood are red 
blood cells. Cells of the immune system can travel between the distinct 
lymphatic and blood circulatory systems, which are separated by interstitial 
space, by a process called extravasation (passing through to surrounding 
tissue). 


Recall that cells of the immune system originate from stem cells in the bone 
marrow. B cell maturation occurs in the bone marrow, whereas progenitor 
cells migrate from the bone marrow and develop and mature into naive T 
cells in the organ called the thymus. 


On maturation, T and B lymphocytes circulate to various destinations. 
Lymph nodes scattered throughout the body house large populations of T 
and B cells, dendritic cells, and macrophages ([link]). Lymph gathers 
antigens as it drains from tissues. These antigens then are filtered through 
lymph nodes before the lymph is returned to circulation. APCs in the lymph 
nodes capture and process antigens and inform nearby lymphocytes about 
potential pathogens. 


Afferent lymphatic 
vessel 


Efferent lymphatic 
vessel 


(b) 


(a) Lymphatic vessels carry a clear fluid called 
lymph throughout the body. The liquid passes 
through (b) lymph nodes that filter the lymph 
that enters the node through afferent vessels 
and leaves through efferent vessels; lymph 
nodes are filled with lymphocytes that purge 
infecting cells. (credit a: modification of work 
by NIH; credit b: modification of work by NCI, 
NIH) 


The spleen houses B and T cells, macrophages, dendritic cells, and NK cells 
({link]). The spleen is the site where APCs that have trapped foreign 
particles in the blood can communicate with lymphocytes. Antibodies are 
synthesized and secreted by activated plasma cells in the spleen, and the 
spleen filters foreign substances and antibody-complexed pathogens from 
the blood. Functionally, the spleen is to the blood as lymph nodes are to the 
lymph. 


The spleen functions to 
immunologically filter the 
blood and allow for 
communication between cells 
corresponding to the innate 
and adaptive immune 
responses. (credit: 
modification of work by NCI, 
NIH) 


Section Summary 


The adaptive immune response is a slower-acting, longer-lasting, and more 
specific response than the innate response. However, the adaptive response 
requires information from the innate immune system to function. APCs 
display antigens on MHC molecules to naive T cells. T cells with cell- 
surface receptors that bind a specific antigen will bind to that APC. In 
response, the T cells differentiate and proliferate, becoming Ty cells or Tc 
cells. Ty cells stimulate B cells that have engulfed and presented pathogen- 
derived antigens. B cells differentiate into plasma cells that secrete 
antibodies, whereas T¢ cells destroy infected or cancerous cells. Memory 
cells are produced by activated and proliferating B and T cells and persist 
after a primary exposure to a pathogen. If re-exposure occurs, memory cells 
differentiate into effector cells without input from the innate immune 
system. 


Art Connections 


Exercise: 


Problem: 


[link] The Rh antigen is found on Rh-positive red blood cells. An Rh- 
negative female can usually carry an Rh-positive fetus to term without 
difficulty. However, if she has a second Rh-positive fetus, her body 
may launch an immune attack that causes hemolytic disease of the 
newborn. Why do you think hemolytic disease is only a problem 
during the second or subsequent pregnancies? 


Solution: 


[link] If the blood of the mother and fetus mixes, memory cells that 
recognize the Rh antigen of the fetus can form in the mother late in the 
first pregnancy. During subsequent pregnancies, these memory cells 
launch an immune attack on the fetal blood cells of an Rh-positive 
fetus. Injection of anti-Rh antibody during the first pregnancy prevents 
the immune response from occurring. 


Review Questions 


Exercise: 


Problem:The humoral immune response depends on which cells? 


a. Tc cells 

b. B cells 

c. B and Ty cells 
d. Tc and Ty cells 


Solution: 


C 
Exercise: 


Problem: 


Foreign particles circulating in the blood are filtered by the 


a. spleen 
b. lymph nodes 
c. MALT 
d. lymph 


Solution: 


A 


Free Response 


Exercise: 


Problem: 


How do B and T cells differ with respect to antigens that they bind? 


Solution: 


T cells bind antigens that have been digested and embedded in MHC 
molecules by APCs. In contrast, B cells function as APCs to bind 
intact, unprocessed antigens. 


Exercise: 


Problem: 


Why is the immune response after reinfection much faster than the 
adaptive immune response after the initial infection? 


Solution: 


Upon reinfection, the memory cells will immediately differentiate into 
plasma cells and CTLs without input from APCs or Ty cells. In 
contrast, the adaptive immune response to the initial infection requires 
time for naive B and T cells with the appropriate antigen specificities 
to be identified and activated. 


Glossary 


active immunity 
an immunity that occurs as a result of the activity of the body’s own 
cells rather than from antibodies acquired from an external source 


adaptive immunity 
a specific immune response that occurs after exposure to an antigen 
either from a pathogen or a vaccination 


antibody 
a protein that is produced by plasma cells after stimulation by an 
antigen; also known as an immunoglobulin 


antigen 
a macromolecule that reacts with cells of the immune system and 
which may or may not have a stimulatory effect 


antigen-presenting cell (APC) 
an immune cell that detects, engulfs, and informs the adaptive immune 
response about an infection by presenting the processed antigen on its 
cell surface 


B cell 
a lymphocyte that matures in the bone marrow 


cell-mediated immune response 
an adaptive immune response that is controlled by T cells 


cytotoxic T lymphocyte (Tc) 
an adaptive immune cell that directly kills infected cells via enzymes, 
and that releases cytokines to enhance the immune response 


dendritic cell 
an immune cell that processes antigen material and presents it on the 
surface of its cell in MHC class II molecules and induces an immune 
response in other cells 


effector cell 
a lymphocyte that has differentiated, such as a B cell, plasma cell, or 
cytotoxic T cell 


helper T lymphocyte (Ty) 
a cell of the adaptive immune system that binds APCs via MHC class 
II molecules and stimulates B cells or secretes cytokines to initiate the 
immune response 


humoral immune response 
the adaptive immune response that is controlled by activated B cells 
and antibodies 


immune tolerance 
an acquired ability to prevent an unnecessary or harmful immune 
response to a detected foreign body known not to cause disease 


lymph 


the watery fluid present in the lymphatic circulatory system that bathes 
tissues and organs with protective white blood cells and does not 
contain erythrocytes 


memory cell 
an antigen-specific B or T lymphocyte that does not differentiate into 
an effector cell during the primary immune response but that can 
immediately become an effector cell on reexposure to the same 
pathogen 


major histocompatibility class (MHC) II molecule 
a protein found on the surface of antigen-presenting cells that signals 
to immune cells whether the cell is normal or is infected or cancerous; 
it provides the appropriate template into which antigens can be loaded 
for recognition by lymphocytes 


passive immunity 
an immunity that does not result from the activity of the body’s own 
immune cells but by transfer of antibodies from one individual to 
another 


primary immune response 
the response of the adaptive immune system to the first exposure to an 
antigen 


secondary immune response 
the response of the adaptive immune system to a second or later 
exposure to an antigen mediated by memory cells 


T cell 
a lymphocyte that matures in the thymus gland